BLASTX nr result

ID: Coptis24_contig00032595 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032595
         (740 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518049.1| conserved hypothetical protein [Ricinus comm...   241   1e-61
ref|XP_002328903.1| predicted protein [Populus trichocarpa] gi|2...   236   5e-60
emb|CAN66130.1| hypothetical protein VITISV_033611 [Vitis vinifera]   231   2e-58
ref|XP_002298683.1| predicted protein [Populus trichocarpa] gi|2...   227   2e-57
gb|AAQ62591.1| hypothetical protein [Glycine max]                     220   2e-55

>ref|XP_002518049.1| conserved hypothetical protein [Ricinus communis]
           gi|223542645|gb|EEF44182.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 443

 Score =  241 bits (615), Expect = 1e-61
 Identities = 122/205 (59%), Positives = 145/205 (70%), Gaps = 7/205 (3%)
 Frame = +1

Query: 145 MPPRRKKWTXXXXRTLIEKYGEMVTNGTLAKMKTREKKFRPIAAQVNILHHNLDPIAFPW 324
           MPPRRKKWT    +TLIEKYGEMV++GTLAKMKTREKK++PIA  VN +HH  DPI +PW
Sbjct: 2   MPPRRKKWTEAEEKTLIEKYGEMVSDGTLAKMKTREKKYKPIALYVNYVHHVRDPITYPW 61

Query: 325 QWSWKDASTKVQNMRHQYLLVKQKIKKPQL---VEEGVEDSGLESEEQFDWVEGISHWPN 495
           QW+WKD STKVQNMRHQYLLVKQKIKKP+L   VE      G  + ++FDWVEG++HW N
Sbjct: 62  QWTWKDVSTKVQNMRHQYLLVKQKIKKPELSAVVENSGGGEGTNNADEFDWVEGLTHWSN 121

Query: 496 FLRYKNVFGDVPLGGFIINHNIDSTNEVIN--RENGNSFASTANDIVL--FDRFGNSPNE 663
           FL YK VFGDVP+       N +    V+N  REN          I +  F + GNS   
Sbjct: 122 FLLYKEVFGDVPIAYTSNGSNGNDLTGVLNEDRENAAGLLGVGRGIEIGEFGQLGNS--A 179

Query: 664 DGFGVGIDGGENGVLGLGFDYDGED 738
           DG  VGIDGGE+G+LGLGFDY+GE+
Sbjct: 180 DGDFVGIDGGEDGMLGLGFDYEGEE 204


>ref|XP_002328903.1| predicted protein [Populus trichocarpa] gi|222839333|gb|EEE77670.1|
           predicted protein [Populus trichocarpa]
          Length = 445

 Score =  236 bits (601), Expect = 5e-60
 Identities = 119/207 (57%), Positives = 146/207 (70%), Gaps = 9/207 (4%)
 Frame = +1

Query: 145 MPPRRKKWTXXXXRTLIEKYGEMVTNGTLAKMKTREKKFRPIAAQVNILHHNLDPIAFPW 324
           MPP+RKKWT    +TLIEKYGEMV++GTLAKMKTREKK++PIA  VN +HH  DP+A+PW
Sbjct: 1   MPPKRKKWTEVEEKTLIEKYGEMVSDGTLAKMKTREKKYKPIALYVNSVHHVHDPMAYPW 60

Query: 325 QWSWKDASTKVQNMRHQYLLVKQKIKKPQLVEEGVEDSG-----LESEEQFDWVEGISHW 489
           QW+WKD STKVQNMRHQY+LVKQKIKKP+     +E+SG       +E++FDW+EG++HW
Sbjct: 61  QWTWKDVSTKVQNMRHQYMLVKQKIKKPEF--SSMENSGCGGGECGNEDEFDWLEGLTHW 118

Query: 490 PNFLRYKNVFGDVPLGGFIINHNIDSTNEVIN--RENGNSFASTAN--DIVLFDRFGNSP 657
            NFLRYK VFGD+P+              V+N  RE G          D+  F + GNS 
Sbjct: 119 SNFLRYKEVFGDLPVAYGTNGSTCSDLMGVLNEDRETGGGLLGGVRGMDMAEFGQIGNS- 177

Query: 658 NEDGFGVGIDGGENGVLGLGFDYDGED 738
             DG   GIDGGENGVLGLGFDY+GE+
Sbjct: 178 -ADGDFAGIDGGENGVLGLGFDYEGEE 203


>emb|CAN66130.1| hypothetical protein VITISV_033611 [Vitis vinifera]
          Length = 412

 Score =  231 bits (588), Expect = 2e-58
 Identities = 123/199 (61%), Positives = 143/199 (71%), Gaps = 2/199 (1%)
 Frame = +1

Query: 148 PPRRKKWTXXXXRTLIEKYGEMVTNGTLAKMKTREKKFRPIAAQVNILHHNLDPIAFPWQ 327
           PPRRKKWT    RTLI++YGEMV+NG LAKMKTREKK+RPIA  VN +HH  DPIA+PWQ
Sbjct: 3   PPRRKKWTEAEERTLIDRYGEMVSNGALAKMKTREKKYRPIALYVNSVHHVRDPIAYPWQ 62

Query: 328 WSWKDASTKVQNMRHQYLLVKQKIKKPQLVEEGVEDSGLESEEQFDWVEGISHWPNFLRY 507
           W+WKD STKVQNMRHQYLLVKQKIKKP+L   G   SG    E F+WVEGI+HW NFLRY
Sbjct: 63  WTWKDVSTKVQNMRHQYLLVKQKIKKPEL---GDAASG---PEDFNWVEGITHWSNFLRY 116

Query: 508 KNVFGDVPLGGFIINHNIDSTNEVINRENGNSF--ASTANDIVLFDRFGNSPNEDGFGVG 681
           K VFGDVPL      + I+    V N ENG  F  ++   +IV F   G+S + D FGV 
Sbjct: 117 KEVFGDVPLA----FNGIEPLAMVGNDENGGGFIGSNRGMEIVEFGHLGHSADGD-FGV- 170

Query: 682 IDGGENGVLGLGFDYDGED 738
               ENGVLG+GF+YDG+D
Sbjct: 171 ----ENGVLGMGFEYDGDD 185


>ref|XP_002298683.1| predicted protein [Populus trichocarpa] gi|222845941|gb|EEE83488.1|
           predicted protein [Populus trichocarpa]
          Length = 450

 Score =  227 bits (578), Expect = 2e-57
 Identities = 118/208 (56%), Positives = 142/208 (68%), Gaps = 10/208 (4%)
 Frame = +1

Query: 145 MPPRRKKWTXXXXRTLIEKYGEMVTNGTLAKMKTREKKFRPIAAQVNILHHNLDPIAFPW 324
           +P  RKKWT    +TLIEKYGEMV++GTLAKMKTREKK++PIA  VN  HH  DPIA+PW
Sbjct: 4   IPSSRKKWTEVEEKTLIEKYGEMVSDGTLAKMKTREKKYKPIALYVNSAHHVRDPIAYPW 63

Query: 325 QWSWKDASTKVQNMRHQYLLVKQKIKKPQLVEEGVEDSGLESEE------QFDWVEGISH 486
           QW+WKD STKVQNMRHQYLLVKQKIKKP+     +++SG    E      +FDW+EG +H
Sbjct: 64  QWTWKDVSTKVQNMRHQYLLVKQKIKKPEF--SSMDNSGCGGGECSGNGDEFDWLEGRTH 121

Query: 487 WPNFLRYKNVFGDVPLGGFIINHNIDSTNEVIN--RENGNSFASTAN--DIVLFDRFGNS 654
           W NFL YK VFGD+P+       N +    V+N  RENG          ++  F + GNS
Sbjct: 122 WSNFLLYKEVFGDLPVSYGTNGSNCNDLMGVLNEDRENGGGLLGGVRGMEMAEFGQLGNS 181

Query: 655 PNEDGFGVGIDGGENGVLGLGFDYDGED 738
              DG   GIDGGENGVLGLGFDY+GE+
Sbjct: 182 --ADGDFAGIDGGENGVLGLGFDYEGEE 207


>gb|AAQ62591.1| hypothetical protein [Glycine max]
          Length = 440

 Score =  220 bits (561), Expect = 2e-55
 Identities = 110/205 (53%), Positives = 144/205 (70%), Gaps = 7/205 (3%)
 Frame = +1

Query: 145 MPPRRKKWTXXXXRTLIEKYGEMVTNGTLAKMKTREKKFRPIAAQVNILHHNLDPIAFPW 324
           +PPRRKKWT    +TLI+KYGE+V +G+LAKM+TREKKF+PIA  VN +HH  DP+A+PW
Sbjct: 2   IPPRRKKWTEAEEKTLIDKYGELVEDGSLAKMRTREKKFKPIACHVNSVHHVRDPVAYPW 61

Query: 325 QWSWKDASTKVQNMRHQYLLVKQKIKKPQLVEEGVEDSGLESEEQFDWVEGISHWPNFLR 504
           QWSWKD STKVQNMRHQYLLVKQKIK+P+    G      +   +FDWVEG++HW NFLR
Sbjct: 62  QWSWKDVSTKVQNMRHQYLLVKQKIKRPEFSGSG-GGGDCDDVSEFDWVEGLTHWSNFLR 120

Query: 505 YKNVFGDVPL-----GGFIINHNIDSTNEVINRENGNSFASTAN--DIVLFDRFGNSPNE 663
           YK+VFGDV L     GG  +    D  +   + +NG+ F +     D+V F + G+S + 
Sbjct: 121 YKDVFGDVALVVGGHGGNELMGIEDGDHGDRDGDNGDGFLAGGGGMDMVEFGQMGHSGDG 180

Query: 664 DGFGVGIDGGENGVLGLGFDYDGED 738
           D FG  +DG +N V+GLGF+Y+ E+
Sbjct: 181 D-FGAAMDGVDNEVMGLGFEYEAEE 204


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