BLASTX nr result

ID: Coptis24_contig00032594 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032594
         (303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527423.1| multidrug resistance-associated protein 1, 3...    91   1e-16
ref|XP_002276212.2| PREDICTED: ABC transporter C family member 8...    91   1e-16
emb|CBI35971.3| unnamed protein product [Vitis vinifera]               91   1e-16
ref|XP_002276193.2| PREDICTED: ABC transporter C family member 8...    87   2e-15
ref|XP_002276236.2| PREDICTED: ABC transporter C family member 8...    82   6e-14

>ref|XP_002527423.1| multidrug resistance-associated protein 1, 3 (mrp1, 3),
           abc-transoprter, putative [Ricinus communis]
           gi|223533233|gb|EEF34989.1| multidrug
           resistance-associated protein 1, 3 (mrp1, 3),
           abc-transoprter, putative [Ricinus communis]
          Length = 1475

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 42/101 (41%), Positives = 68/101 (67%), Gaps = 1/101 (0%)
 Frame = +2

Query: 2   DGLGVVFLSLFYLFFIVESVRRHSVCESARKDRVFVACSVCCVIPSIAHFIAFFWDIRVK 181
           D + +VFL +FYLF ++ S+R+H V  S R+D + V  S+CC + SIA+     WD+  K
Sbjct: 39  DIINLVFLGVFYLFLLLGSIRKHQVSGSNRRDWISVVVSICCTLISIAYLGVGLWDLIAK 98

Query: 182 DGS-SRTSWVVNVVRGLTWISLSVSLISQRSQGTKIVILIW 301
           + S +  SW+V +VRG+ WIS++VSL+  RS+  +I++ +W
Sbjct: 99  NHSFNHLSWLVYLVRGIIWISVAVSLLVTRSRWNRILVTVW 139


>ref|XP_002276212.2| PREDICTED: ABC transporter C family member 8-like [Vitis vinifera]
          Length = 1469

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 44/101 (43%), Positives = 66/101 (65%), Gaps = 1/101 (0%)
 Frame = +2

Query: 2   DGLGVVFLSLFYLFFIVESVRRHSVCESARKDRVFVACSVCCVIPSIAHFIAFFWDIRVK 181
           D L ++FLS+F +  ++ S+R+H +   +R+D V    S+CC + SI +  A FWD+  K
Sbjct: 32  DVLNLLFLSVFCVLLVIGSIRKHEISRCSRRDWVSRGVSICCALISIGYLSAGFWDLYAK 91

Query: 182 -DGSSRTSWVVNVVRGLTWISLSVSLISQRSQGTKIVILIW 301
            +G   +SW V  VRGL WISL+VSL+ QRS+ T+I+  IW
Sbjct: 92  NEGPRLSSWPVYFVRGLIWISLTVSLLVQRSKWTRILSSIW 132


>emb|CBI35971.3| unnamed protein product [Vitis vinifera]
          Length = 2772

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 44/101 (43%), Positives = 66/101 (65%), Gaps = 1/101 (0%)
 Frame = +2

Query: 2    DGLGVVFLSLFYLFFIVESVRRHSVCESARKDRVFVACSVCCVIPSIAHFIAFFWDIRVK 181
            D L ++FLS+F +  ++ S+R+H +   +R+D V    S+CC + SI +  A FWD+  K
Sbjct: 1548 DVLNLLFLSVFCVLLVIGSIRKHEISRCSRRDWVSRGVSICCALISIGYLSAGFWDLYAK 1607

Query: 182  -DGSSRTSWVVNVVRGLTWISLSVSLISQRSQGTKIVILIW 301
             +G   +SW V  VRGL WISL+VSL+ QRS+ T+I+  IW
Sbjct: 1608 NEGPRLSSWPVYFVRGLIWISLTVSLLVQRSKWTRILSSIW 1648



 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 40/101 (39%), Positives = 67/101 (66%), Gaps = 1/101 (0%)
 Frame = +2

Query: 2   DGLGVVFLSLFYLFFIVESVRRHSVCESARKDRVFVACSVCCVIPSIAHFIAFFWDIRVK 181
           D L ++FLS+F +  ++  +R+H +   +R+D V    S+CC +  IA+  A FWD+ V+
Sbjct: 54  DVLNLLFLSVFSVILVIGYIRKHEISGCSRRDWVSGGVSICCALTGIAYVSAGFWDLVVR 113

Query: 182 DGSSR-TSWVVNVVRGLTWISLSVSLISQRSQGTKIVILIW 301
           +G S+   W+V  VRGLTWISL+VSL+ + S+ ++I+  +W
Sbjct: 114 NGGSQPLGWLVYFVRGLTWISLAVSLLVRSSKWSRILSFLW 154


>ref|XP_002276193.2| PREDICTED: ABC transporter C family member 8-like [Vitis vinifera]
          Length = 1462

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 40/101 (39%), Positives = 67/101 (66%), Gaps = 1/101 (0%)
 Frame = +2

Query: 2   DGLGVVFLSLFYLFFIVESVRRHSVCESARKDRVFVACSVCCVIPSIAHFIAFFWDIRVK 181
           D L ++FLS+F +  ++  +R+H +   +R+D V    S+CC +  IA+  A FWD+ V+
Sbjct: 32  DVLNLLFLSVFSVILVIGYIRKHEISGCSRRDWVSGGVSICCALTGIAYVSAGFWDLVVR 91

Query: 182 DGSSR-TSWVVNVVRGLTWISLSVSLISQRSQGTKIVILIW 301
           +G S+   W+V  VRGLTWISL+VSL+ + S+ ++I+  +W
Sbjct: 92  NGGSQPLGWLVYFVRGLTWISLAVSLLVRSSKWSRILSFLW 132


>ref|XP_002276236.2| PREDICTED: ABC transporter C family member 8-like [Vitis vinifera]
          Length = 1465

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 41/101 (40%), Positives = 63/101 (62%), Gaps = 1/101 (0%)
 Frame = +2

Query: 2   DGLGVVFLSLFYLFFIVESVRRHSVCESARKDRVFVACSVCCVIPSIAHFIAFFWDIRVK 181
           D L ++FLS+F +  ++ SVR++ + E +R+D V    S+CC + SI +  A  WD+ VK
Sbjct: 32  DVLNLLFLSVFCVILVMGSVRKNVIFEHSRRDWVSGGVSICCAVVSIGYLSAGLWDLFVK 91

Query: 182 -DGSSRTSWVVNVVRGLTWISLSVSLISQRSQGTKIVILIW 301
            +GS   SW    VRGL WISL+ SL+ QR +  +I+  +W
Sbjct: 92  NEGSGHLSWWAYFVRGLVWISLAASLLIQRPKCIRILSSLW 132


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