BLASTX nr result

ID: Coptis24_contig00032588 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032588
         (341 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34913.3| unnamed protein product [Vitis vinifera]              148   5e-34
ref|XP_002277585.1| PREDICTED: uncharacterized protein LOC100264...   148   5e-34
emb|CAN81854.1| hypothetical protein VITISV_041265 [Vitis vinifera]   145   3e-33
ref|XP_002300034.1| predicted protein [Populus trichocarpa] gi|2...   140   8e-32
ref|XP_004170209.1| PREDICTED: uncharacterized LOC101205102, par...   139   3e-31

>emb|CBI34913.3| unnamed protein product [Vitis vinifera]
          Length = 600

 Score =  148 bits (373), Expect = 5e-34
 Identities = 71/97 (73%), Positives = 86/97 (88%), Gaps = 2/97 (2%)
 Frame = +2

Query: 2   VKDPKKRPSSEKLLKNRFFQKARSNEFIAKTLLQGLSPLGDRLKTLKAKESELLVQNKAI 181
           VKDPKKRP+SEKL K+ FF+ ARSNE++A+T+L+GL+PLGDR +TLKAKE++LLVQNKA+
Sbjct: 257 VKDPKKRPTSEKLFKHSFFKHARSNEYLARTILEGLTPLGDRFRTLKAKEADLLVQNKAL 316

Query: 182 NGDKEKLSQQEYIRGISGWNFNLEDYKNDTSL--DYD 286
            GDKE+LSQQEYIRGIS WNFNLED KN  +L  DYD
Sbjct: 317 YGDKEQLSQQEYIRGISAWNFNLEDLKNQAALIQDYD 353


>ref|XP_002277585.1| PREDICTED: uncharacterized protein LOC100264532 [Vitis vinifera]
          Length = 662

 Score =  148 bits (373), Expect = 5e-34
 Identities = 71/97 (73%), Positives = 86/97 (88%), Gaps = 2/97 (2%)
 Frame = +2

Query: 2   VKDPKKRPSSEKLLKNRFFQKARSNEFIAKTLLQGLSPLGDRLKTLKAKESELLVQNKAI 181
           VKDPKKRP+SEKL K+ FF+ ARSNE++A+T+L+GL+PLGDR +TLKAKE++LLVQNKA+
Sbjct: 257 VKDPKKRPTSEKLFKHSFFKHARSNEYLARTILEGLTPLGDRFRTLKAKEADLLVQNKAL 316

Query: 182 NGDKEKLSQQEYIRGISGWNFNLEDYKNDTSL--DYD 286
            GDKE+LSQQEYIRGIS WNFNLED KN  +L  DYD
Sbjct: 317 YGDKEQLSQQEYIRGISAWNFNLEDLKNQAALIQDYD 353


>emb|CAN81854.1| hypothetical protein VITISV_041265 [Vitis vinifera]
          Length = 763

 Score =  145 bits (367), Expect = 3e-33
 Identities = 68/92 (73%), Positives = 83/92 (90%)
 Frame = +2

Query: 2   VKDPKKRPSSEKLLKNRFFQKARSNEFIAKTLLQGLSPLGDRLKTLKAKESELLVQNKAI 181
           VKDPKKRP+SEKL K+ FF+ ARSNE++A+T+L+GL+PLGDR +TLKAKE++LLVQNKA+
Sbjct: 257 VKDPKKRPTSEKLFKHSFFKHARSNEYLARTILEGLTPLGDRFRTLKAKEADLLVQNKAL 316

Query: 182 NGDKEKLSQQEYIRGISGWNFNLEDYKNDTSL 277
            GDKE+LSQQEYIRGIS WNFNLED KN  +L
Sbjct: 317 YGDKEQLSQQEYIRGISAWNFNLEDLKNQAAL 348


>ref|XP_002300034.1| predicted protein [Populus trichocarpa] gi|222847292|gb|EEE84839.1|
           predicted protein [Populus trichocarpa]
          Length = 694

 Score =  140 bits (354), Expect = 8e-32
 Identities = 67/97 (69%), Positives = 83/97 (85%), Gaps = 2/97 (2%)
 Frame = +2

Query: 2   VKDPKKRPSSEKLLKNRFFQKARSNEFIAKTLLQGLSPLGDRLKTLKAKESELLVQNKAI 181
           VKDPKKRP+SEKLLK+ FF+ ARS++++ + +L GLSPLG+R K LKAKE++LLVQNKA+
Sbjct: 259 VKDPKKRPTSEKLLKHHFFKNARSHDYLVRAILDGLSPLGERFKILKAKEADLLVQNKAL 318

Query: 182 NGDKEKLSQQEYIRGISGWNFNLEDYKNDTSL--DYD 286
            GDKE++SQQEYIRGIS WNFNLED KN  +L  DYD
Sbjct: 319 YGDKEQISQQEYIRGISAWNFNLEDLKNQAALIQDYD 355


>ref|XP_004170209.1| PREDICTED: uncharacterized LOC101205102, partial [Cucumis sativus]
          Length = 674

 Score =  139 bits (349), Expect = 3e-31
 Identities = 68/97 (70%), Positives = 79/97 (81%)
 Frame = +2

Query: 2   VKDPKKRPSSEKLLKNRFFQKARSNEFIAKTLLQGLSPLGDRLKTLKAKESELLVQNKAI 181
           VKDPKKRPSSEKLLK+ FF+ ARS +++ +T+L GL PLGDR K LKAKE++LL QNKA+
Sbjct: 262 VKDPKKRPSSEKLLKHPFFKHARSVDYLTRTILDGLDPLGDRFKKLKAKEADLLGQNKAL 321

Query: 182 NGDKEKLSQQEYIRGISGWNFNLEDYKNDTSLDYDGD 292
            GDKE LSQQEYIRGIS WNFNLED KN  +L  D D
Sbjct: 322 YGDKEHLSQQEYIRGISAWNFNLEDLKNQAALIQDDD 358


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