BLASTX nr result
ID: Coptis24_contig00032586
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00032586 (308 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AFU97133.1| NB-LRR resistance-like protein RC80, partial [Ger... 102 4e-20 gb|AFU97132.1| NB-LRR resistance-like protein RGC79, partial [Ge... 102 4e-20 gb|AFU97131.1| NB-LRR resistance-like protein RC78, partial [Ger... 102 4e-20 gb|AFU97079.1| NB-LRR resistance-like protein RGC26, partial [Ge... 102 4e-20 gb|AFC90572.1| nucleotide-binding site leucine-rich repeat prote... 100 1e-19 >gb|AFU97133.1| NB-LRR resistance-like protein RC80, partial [Gerbera hybrid cultivar] gi|408905175|gb|AFU97134.1| NB-LRR resistance-like protein RC81, partial [Gerbera hybrid cultivar] Length = 165 Score = 102 bits (253), Expect = 4e-20 Identities = 55/102 (53%), Positives = 66/102 (64%) Frame = -1 Query: 308 GKTTIMTYVNNQLNKYQIFDSVIWVTVSKPLNLAKLQSDIARAIXXXXXXXXXXXXXXXR 129 GKTTIM ++ NQL ++FD VIWV VSK N+ KLQ DIA A R Sbjct: 4 GKTTIMMHIYNQLIDGKLFDRVIWVNVSKTFNVEKLQLDIANATNLELSVEEKVIWRATR 63 Query: 128 LFENLLRKKKFVLILDDLWRKFPLEKIGIPQPNMENGCKLVF 3 L E+L + KKFVLILDD+W KF LE++GIPQP+ NGCK VF Sbjct: 64 LLEHL-QGKKFVLILDDMWHKFSLEEVGIPQPSTANGCKFVF 104 >gb|AFU97132.1| NB-LRR resistance-like protein RGC79, partial [Gerbera hybrid cultivar] Length = 166 Score = 102 bits (253), Expect = 4e-20 Identities = 55/102 (53%), Positives = 66/102 (64%) Frame = -1 Query: 308 GKTTIMTYVNNQLNKYQIFDSVIWVTVSKPLNLAKLQSDIARAIXXXXXXXXXXXXXXXR 129 GKTTIM ++ NQL ++FD VIWV VSK N+ KLQ DIA A R Sbjct: 4 GKTTIMMHIYNQLIDGKLFDRVIWVNVSKTFNVEKLQLDIANATNLELSVEEKVIWRATR 63 Query: 128 LFENLLRKKKFVLILDDLWRKFPLEKIGIPQPNMENGCKLVF 3 L E+L + KKFVLILDD+W KF LE++GIPQP+ NGCK VF Sbjct: 64 LLEHL-QGKKFVLILDDMWHKFSLEEVGIPQPSTANGCKFVF 104 >gb|AFU97131.1| NB-LRR resistance-like protein RC78, partial [Gerbera hybrid cultivar] Length = 165 Score = 102 bits (253), Expect = 4e-20 Identities = 55/102 (53%), Positives = 66/102 (64%) Frame = -1 Query: 308 GKTTIMTYVNNQLNKYQIFDSVIWVTVSKPLNLAKLQSDIARAIXXXXXXXXXXXXXXXR 129 GKTTIM ++ NQL ++FD VIWV VSK N+ KLQ DIA A R Sbjct: 4 GKTTIMMHIYNQLIDGKLFDRVIWVNVSKTFNVEKLQLDIANATNLELSVEEKVIWRATR 63 Query: 128 LFENLLRKKKFVLILDDLWRKFPLEKIGIPQPNMENGCKLVF 3 L E+L + KKFVLILDD+W KF LE++GIPQP+ NGCK VF Sbjct: 64 LLEHL-QGKKFVLILDDMWHKFSLEEVGIPQPSTANGCKFVF 104 >gb|AFU97079.1| NB-LRR resistance-like protein RGC26, partial [Gerbera hybrid cultivar] Length = 164 Score = 102 bits (253), Expect = 4e-20 Identities = 55/102 (53%), Positives = 66/102 (64%) Frame = -1 Query: 308 GKTTIMTYVNNQLNKYQIFDSVIWVTVSKPLNLAKLQSDIARAIXXXXXXXXXXXXXXXR 129 GKTTIM ++ NQL ++FD VIWV VSK N+ KLQ DIA A R Sbjct: 4 GKTTIMMHIYNQLIDGKLFDRVIWVNVSKTFNVEKLQLDIANATNLELSVEEKVIWRATR 63 Query: 128 LFENLLRKKKFVLILDDLWRKFPLEKIGIPQPNMENGCKLVF 3 L E+L + KKFVLILDD+W KF LE++GIPQP+ NGCK VF Sbjct: 64 LLEHL-QGKKFVLILDDMWHKFSLEEVGIPQPSTANGCKFVF 104 >gb|AFC90572.1| nucleotide-binding site leucine-rich repeat protein, partial [Rhododendron formosanum] Length = 264 Score = 100 bits (249), Expect = 1e-19 Identities = 51/101 (50%), Positives = 65/101 (64%), Gaps = 1/101 (0%) Frame = -1 Query: 305 KTTIMTYVNNQL-NKYQIFDSVIWVTVSKPLNLAKLQSDIARAIXXXXXXXXXXXXXXXR 129 KTTIM Y++NQL K F +V WVTVSK ++ KLQSDIA+A+ Sbjct: 1 KTTIMKYIHNQLLEKKGKFGNVYWVTVSKAFSITKLQSDIAKALNLSFRDDEDETIRASE 60 Query: 128 LFENLLRKKKFVLILDDLWRKFPLEKIGIPQPNMENGCKLV 6 L+ L +KKK+VLILDDLW F LE++GIP+P NGCK+V Sbjct: 61 LYAALFQKKKYVLILDDLWESFALERVGIPEPTRSNGCKIV 101