BLASTX nr result

ID: Coptis24_contig00032586 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032586
         (308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFU97133.1| NB-LRR resistance-like protein RC80, partial [Ger...   102   4e-20
gb|AFU97132.1| NB-LRR resistance-like protein RGC79, partial [Ge...   102   4e-20
gb|AFU97131.1| NB-LRR resistance-like protein RC78, partial [Ger...   102   4e-20
gb|AFU97079.1| NB-LRR resistance-like protein RGC26, partial [Ge...   102   4e-20
gb|AFC90572.1| nucleotide-binding site leucine-rich repeat prote...   100   1e-19

>gb|AFU97133.1| NB-LRR resistance-like protein RC80, partial [Gerbera hybrid
           cultivar] gi|408905175|gb|AFU97134.1| NB-LRR
           resistance-like protein RC81, partial [Gerbera hybrid
           cultivar]
          Length = 165

 Score =  102 bits (253), Expect = 4e-20
 Identities = 55/102 (53%), Positives = 66/102 (64%)
 Frame = -1

Query: 308 GKTTIMTYVNNQLNKYQIFDSVIWVTVSKPLNLAKLQSDIARAIXXXXXXXXXXXXXXXR 129
           GKTTIM ++ NQL   ++FD VIWV VSK  N+ KLQ DIA A                R
Sbjct: 4   GKTTIMMHIYNQLIDGKLFDRVIWVNVSKTFNVEKLQLDIANATNLELSVEEKVIWRATR 63

Query: 128 LFENLLRKKKFVLILDDLWRKFPLEKIGIPQPNMENGCKLVF 3
           L E+L + KKFVLILDD+W KF LE++GIPQP+  NGCK VF
Sbjct: 64  LLEHL-QGKKFVLILDDMWHKFSLEEVGIPQPSTANGCKFVF 104


>gb|AFU97132.1| NB-LRR resistance-like protein RGC79, partial [Gerbera hybrid
           cultivar]
          Length = 166

 Score =  102 bits (253), Expect = 4e-20
 Identities = 55/102 (53%), Positives = 66/102 (64%)
 Frame = -1

Query: 308 GKTTIMTYVNNQLNKYQIFDSVIWVTVSKPLNLAKLQSDIARAIXXXXXXXXXXXXXXXR 129
           GKTTIM ++ NQL   ++FD VIWV VSK  N+ KLQ DIA A                R
Sbjct: 4   GKTTIMMHIYNQLIDGKLFDRVIWVNVSKTFNVEKLQLDIANATNLELSVEEKVIWRATR 63

Query: 128 LFENLLRKKKFVLILDDLWRKFPLEKIGIPQPNMENGCKLVF 3
           L E+L + KKFVLILDD+W KF LE++GIPQP+  NGCK VF
Sbjct: 64  LLEHL-QGKKFVLILDDMWHKFSLEEVGIPQPSTANGCKFVF 104


>gb|AFU97131.1| NB-LRR resistance-like protein RC78, partial [Gerbera hybrid
           cultivar]
          Length = 165

 Score =  102 bits (253), Expect = 4e-20
 Identities = 55/102 (53%), Positives = 66/102 (64%)
 Frame = -1

Query: 308 GKTTIMTYVNNQLNKYQIFDSVIWVTVSKPLNLAKLQSDIARAIXXXXXXXXXXXXXXXR 129
           GKTTIM ++ NQL   ++FD VIWV VSK  N+ KLQ DIA A                R
Sbjct: 4   GKTTIMMHIYNQLIDGKLFDRVIWVNVSKTFNVEKLQLDIANATNLELSVEEKVIWRATR 63

Query: 128 LFENLLRKKKFVLILDDLWRKFPLEKIGIPQPNMENGCKLVF 3
           L E+L + KKFVLILDD+W KF LE++GIPQP+  NGCK VF
Sbjct: 64  LLEHL-QGKKFVLILDDMWHKFSLEEVGIPQPSTANGCKFVF 104


>gb|AFU97079.1| NB-LRR resistance-like protein RGC26, partial [Gerbera hybrid
           cultivar]
          Length = 164

 Score =  102 bits (253), Expect = 4e-20
 Identities = 55/102 (53%), Positives = 66/102 (64%)
 Frame = -1

Query: 308 GKTTIMTYVNNQLNKYQIFDSVIWVTVSKPLNLAKLQSDIARAIXXXXXXXXXXXXXXXR 129
           GKTTIM ++ NQL   ++FD VIWV VSK  N+ KLQ DIA A                R
Sbjct: 4   GKTTIMMHIYNQLIDGKLFDRVIWVNVSKTFNVEKLQLDIANATNLELSVEEKVIWRATR 63

Query: 128 LFENLLRKKKFVLILDDLWRKFPLEKIGIPQPNMENGCKLVF 3
           L E+L + KKFVLILDD+W KF LE++GIPQP+  NGCK VF
Sbjct: 64  LLEHL-QGKKFVLILDDMWHKFSLEEVGIPQPSTANGCKFVF 104


>gb|AFC90572.1| nucleotide-binding site leucine-rich repeat protein, partial
           [Rhododendron formosanum]
          Length = 264

 Score =  100 bits (249), Expect = 1e-19
 Identities = 51/101 (50%), Positives = 65/101 (64%), Gaps = 1/101 (0%)
 Frame = -1

Query: 305 KTTIMTYVNNQL-NKYQIFDSVIWVTVSKPLNLAKLQSDIARAIXXXXXXXXXXXXXXXR 129
           KTTIM Y++NQL  K   F +V WVTVSK  ++ KLQSDIA+A+                
Sbjct: 1   KTTIMKYIHNQLLEKKGKFGNVYWVTVSKAFSITKLQSDIAKALNLSFRDDEDETIRASE 60

Query: 128 LFENLLRKKKFVLILDDLWRKFPLEKIGIPQPNMENGCKLV 6
           L+  L +KKK+VLILDDLW  F LE++GIP+P   NGCK+V
Sbjct: 61  LYAALFQKKKYVLILDDLWESFALERVGIPEPTRSNGCKIV 101


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