BLASTX nr result

ID: Coptis24_contig00032585 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032585
         (418 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545677.1| PREDICTED: wall-associated receptor kinase 2...    60   2e-07
ref|XP_002520279.1| ATP binding protein, putative [Ricinus commu...    59   4e-07
ref|XP_003543966.1| PREDICTED: uncharacterized protein LOC100784...    58   9e-07
ref|XP_003545673.1| PREDICTED: wall-associated receptor kinase 3...    57   2e-06
emb|CBI18947.3| unnamed protein product [Vitis vinifera]               57   2e-06

>ref|XP_003545677.1| PREDICTED: wall-associated receptor kinase 2-like [Glycine max]
          Length = 717

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 35/71 (49%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
 Frame = -3

Query: 413 LAKRCLNLNGEERPSMKEVAAELEGLRGFERRPWIQRSNGKNMSLASDEIDLYAIPSGCY 234
           LA  CL LNGEERPSMKEVA ELE +R  E+ PWI R      +L   +  L+  PS  Y
Sbjct: 634 LAANCLRLNGEERPSMKEVAMELEAIRQMEKHPWINREK----NLEETQYLLHDAPSKIY 689

Query: 233 --TDSASGLYS 207
              DS+S  Y+
Sbjct: 690 EHRDSSSLQYN 700


>ref|XP_002520279.1| ATP binding protein, putative [Ricinus communis]
            gi|223540498|gb|EEF42065.1| ATP binding protein, putative
            [Ricinus communis]
          Length = 1433

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 27/50 (54%), Positives = 36/50 (72%)
 Frame = -3

Query: 416  QLAKRCLNLNGEERPSMKEVAAELEGLRGFERRPWIQRSNGKNMSLASDE 267
            ++A+ CL L GEERP+MKEVA ELEGLR  E  PW+Q + G+   L S++
Sbjct: 1360 KVAEGCLTLKGEERPTMKEVAVELEGLRKMEVHPWVQVNQGETEYLLSEQ 1409



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 24/42 (57%), Positives = 30/42 (71%)
 Frame = -3

Query: 413 LAKRCLNLNGEERPSMKEVAAELEGLRGFERRPWIQRSNGKN 288
           LAKRCL + GEERP+MKEVA ELEGLR   + PW+   +  +
Sbjct: 668 LAKRCLRVKGEERPTMKEVAMELEGLRLMVKHPWVNNESNSS 709


>ref|XP_003543966.1| PREDICTED: uncharacterized protein LOC100784078 [Glycine max]
          Length = 1481

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 26/35 (74%), Positives = 29/35 (82%)
 Frame = -3

Query: 413 LAKRCLNLNGEERPSMKEVAAELEGLRGFERRPWI 309
           LA +CL LNGEERPSMKEVA ELEG+R  E+ PWI
Sbjct: 660 LAAKCLRLNGEERPSMKEVAMELEGIRIMEKHPWI 694



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
 Frame = -3

Query: 413  LAKRCLNLNGEERPSMKEVAAELEGLRGFERRPWIQRSNGKNMS---LASDEIDLYAIPS 243
            LA +CL LNGEERPSM+EVA EL+ +R  E+ PWI R      +   L      +Y    
Sbjct: 1397 LAAKCLRLNGEERPSMREVAIELDAIRQKEKHPWINRDQNMEETQFLLHDASSSIYTHGD 1456

Query: 242  GCYTDSASGLYSLENDMIQSMN 177
             C     +G  S+ + ++ S++
Sbjct: 1457 SCSHQCTAGYDSIRDHVVISLD 1478


>ref|XP_003545673.1| PREDICTED: wall-associated receptor kinase 3-like [Glycine max]
          Length = 714

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 26/35 (74%), Positives = 29/35 (82%)
 Frame = -3

Query: 413 LAKRCLNLNGEERPSMKEVAAELEGLRGFERRPWI 309
           LA +CL LNGEERPSMKEVA ELEG+R  E+ PWI
Sbjct: 631 LAAKCLRLNGEERPSMKEVAMELEGMRLTEKHPWI 665


>emb|CBI18947.3| unnamed protein product [Vitis vinifera]
          Length = 1170

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 27/49 (55%), Positives = 32/49 (65%)
 Frame = -3

Query: 413  LAKRCLNLNGEERPSMKEVAAELEGLRGFERRPWIQRSNGKNMSLASDE 267
            LAKRCL L GE+RP+MKEVA ELEG+R  +  PWI   N +      DE
Sbjct: 1090 LAKRCLELKGEDRPTMKEVAMELEGMRKMKMHPWIGELNSEETIHLLDE 1138


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