BLASTX nr result

ID: Coptis24_contig00032584 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032584
         (281 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279803.1| PREDICTED: uncharacterized protein LOC100264...   127   1e-27
ref|XP_002515210.1| conserved hypothetical protein [Ricinus comm...   125   3e-27
ref|XP_003529216.1| PREDICTED: uncharacterized protein LOC100814...   125   4e-27
ref|XP_003637686.1| Protein tolB [Medicago truncatula] gi|355503...   125   5e-27
emb|CAN71280.1| hypothetical protein VITISV_027089 [Vitis vinifera]   124   6e-27

>ref|XP_002279803.1| PREDICTED: uncharacterized protein LOC100264112 [Vitis vinifera]
          Length = 677

 Score =  127 bits (318), Expect = 1e-27
 Identities = 57/90 (63%), Positives = 72/90 (80%)
 Frame = -2

Query: 274 VRLTPRGVVDYSPSISKSGKFIAVASYEYRSWNRDMNVLETDIVVFPLADPTQRKIVCKN 95
           V+LTP GVVDYSP+IS+SGKFIAVASY  R W  + + L TDIVVF  ++P +R +VC+ 
Sbjct: 159 VQLTPHGVVDYSPAISRSGKFIAVASYGSRPWGGEFHELHTDIVVFRESEPEKRVVVCER 218

Query: 94  GGWPTWSGDSTIFFHRVAEEGSWSIFRVDL 5
           GGWPTWSGDS ++FHR A++G WSIF V+L
Sbjct: 219 GGWPTWSGDSNLYFHRQADDGWWSIFSVNL 248


>ref|XP_002515210.1| conserved hypothetical protein [Ricinus communis]
           gi|223545690|gb|EEF47194.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 618

 Score =  125 bits (315), Expect = 3e-27
 Identities = 55/91 (60%), Positives = 71/91 (78%)
 Frame = -2

Query: 280 TTVRLTPRGVVDYSPSISKSGKFIAVASYEYRSWNRDMNVLETDIVVFPLADPTQRKIVC 101
           +  RLTP GV+DYSP++S SGK+IAV SY  R W+ +  +L TDIVVF  +DP  R +VC
Sbjct: 77  SVTRLTPYGVIDYSPAVSLSGKYIAVGSYGSRIWDVEFQMLTTDIVVFKQSDPENRVVVC 136

Query: 100 KNGGWPTWSGDSTIFFHRVAEEGSWSIFRVD 8
           + GGWPTWSGDSTI+FHR A++G WSIF+V+
Sbjct: 137 ERGGWPTWSGDSTIYFHRKADDGFWSIFQVN 167


>ref|XP_003529216.1| PREDICTED: uncharacterized protein LOC100814036 [Glycine max]
          Length = 656

 Score =  125 bits (314), Expect = 4e-27
 Identities = 59/93 (63%), Positives = 70/93 (75%), Gaps = 1/93 (1%)
 Frame = -2

Query: 280 TTVRLTPRGVVDYSPSISKSGKFIAVASYEYRSWN-RDMNVLETDIVVFPLADPTQRKIV 104
           T  RLTPRG VDYSP++S +GKF+ VASY  R W   D   L+T+IVVFP +DP  R  V
Sbjct: 134 TVKRLTPRGEVDYSPAVSLTGKFLGVASYRSRRWQTNDFRELQTEIVVFPESDPKNRVTV 193

Query: 103 CKNGGWPTWSGDSTIFFHRVAEEGSWSIFRVDL 5
            + GGWP+WS DSTIFFHR+AE+G WSIFRVDL
Sbjct: 194 SERGGWPSWSQDSTIFFHRIAEDGWWSIFRVDL 226


>ref|XP_003637686.1| Protein tolB [Medicago truncatula] gi|355503621|gb|AES84824.1|
           Protein tolB [Medicago truncatula]
          Length = 650

 Score =  125 bits (313), Expect = 5e-27
 Identities = 56/93 (60%), Positives = 70/93 (75%)
 Frame = -2

Query: 280 TTVRLTPRGVVDYSPSISKSGKFIAVASYEYRSWNRDMNVLETDIVVFPLADPTQRKIVC 101
           T  RLTP GVVDYSP++S +G  IAVASY  R+W+ D   L+TDIVVF  + P  R +V 
Sbjct: 129 TLTRLTPHGVVDYSPAVSLTGNLIAVASYGSRNWDGDFRELKTDIVVFEESVPENRVVVA 188

Query: 100 KNGGWPTWSGDSTIFFHRVAEEGSWSIFRVDLR 2
           + GGWPTW GDST+FFHR+A++G WSIFR DL+
Sbjct: 189 ERGGWPTWLGDSTVFFHRIADDGWWSIFRADLK 221


>emb|CAN71280.1| hypothetical protein VITISV_027089 [Vitis vinifera]
          Length = 677

 Score =  124 bits (312), Expect = 6e-27
 Identities = 57/90 (63%), Positives = 69/90 (76%)
 Frame = -2

Query: 274 VRLTPRGVVDYSPSISKSGKFIAVASYEYRSWNRDMNVLETDIVVFPLADPTQRKIVCKN 95
           V LTP GVVDYSP+IS+SGKFIAVASY  R W  + + L TDIVVF   +P +R +VC+ 
Sbjct: 159 VXLTPHGVVDYSPAISRSGKFIAVASYGSRPWGGEFHELHTDIVVFREXEPEKRVVVCER 218

Query: 94  GGWPTWSGDSTIFFHRVAEEGSWSIFRVDL 5
           GGWPTWSGDS ++FHR A++G WSIF V L
Sbjct: 219 GGWPTWSGDSNLYFHRQADDGWWSIFSVTL 248


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