BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032572
         (380 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003518162.1| PREDICTED: putative pentatricopeptide repeat...   133   2e-29
ref|XP_002333469.1| predicted protein [Populus trichocarpa] gi|2...   132   2e-29
ref|XP_002308333.1| predicted protein [Populus trichocarpa] gi|2...   132   3e-29
ref|XP_002269283.1| PREDICTED: putative pentatricopeptide repeat...   129   3e-28
ref|XP_002524089.1| pentatricopeptide repeat-containing protein,...   125   4e-27

>ref|XP_003518162.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g06400, mitochondrial-like [Glycine max]
          Length = 1034

 Score =  133 bits (334), Expect = 2e-29
 Identities = 57/108 (52%), Positives = 86/108 (79%)
 Frame = -3

Query: 378 YGKAKRISKTLMLFERMRKCGCEPDGTLYEVIVYALCNAGEGDIAMEFYKEMVCKNIEVD 199
           YGKA++IS+ L+ FE M++CGCEPD   Y  I+ +LC+AG+ DIAMEFY EMV K++ +D
Sbjct: 235 YGKARKISEALLAFENMKRCGCEPDAVSYGAIICSLCSAGKRDIAMEFYNEMVRKDMVLD 294

Query: 198 MNLYKVLMNCLSRSGNILDVRLVGEDMMNVSQVPQQKVYSCILRSFCV 55
           + LYK++MNC++RSG+I  V L+G DM+ +S +P++ V+ C+L+SFC+
Sbjct: 295 VRLYKMVMNCMARSGDIAAVSLLGNDMIRLSVMPEKCVHGCMLKSFCI 342


>ref|XP_002333469.1| predicted protein [Populus trichocarpa] gi|222836989|gb|EEE75382.1|
           predicted protein [Populus trichocarpa]
          Length = 1048

 Score =  132 bits (333), Expect = 2e-29
 Identities = 57/108 (52%), Positives = 88/108 (81%)
 Frame = -3

Query: 378 YGKAKRISKTLMLFERMRKCGCEPDGTLYEVIVYALCNAGEGDIAMEFYKEMVCKNIEVD 199
           YGKAK I K L++ E+MRK GCEPD  +YEV +++LC+AG+G+IA+E YKEMV + +E +
Sbjct: 249 YGKAKLIGKALLVHEKMRKSGCEPDVEVYEVTLHSLCDAGKGEIALEIYKEMVQREMEPN 308

Query: 198 MNLYKVLMNCLSRSGNILDVRLVGEDMMNVSQVPQQKVYSCILRSFCV 55
           ++LYK+L+NCL++SG++  V+ V +DM+ VSQ+P+  V+ C+L+S+CV
Sbjct: 309 LSLYKMLLNCLAKSGDVSAVQSVADDMIRVSQIPEHDVHVCVLKSYCV 356


>ref|XP_002308333.1| predicted protein [Populus trichocarpa] gi|222854309|gb|EEE91856.1|
           predicted protein [Populus trichocarpa]
          Length = 1048

 Score =  132 bits (332), Expect = 3e-29
 Identities = 56/108 (51%), Positives = 88/108 (81%)
 Frame = -3

Query: 378 YGKAKRISKTLMLFERMRKCGCEPDGTLYEVIVYALCNAGEGDIAMEFYKEMVCKNIEVD 199
           YGKAK + K L++ E+MRK GCEPD  +YEV +++LC+AG+G+IA+E YKEMV + +E +
Sbjct: 249 YGKAKLVGKALLVHEKMRKSGCEPDVEVYEVTLHSLCDAGKGEIALEIYKEMVQREMEPN 308

Query: 198 MNLYKVLMNCLSRSGNILDVRLVGEDMMNVSQVPQQKVYSCILRSFCV 55
           ++LYK+L+NCL++SG++  V+ V +DM+ VSQ+P+  V+ C+L+S+CV
Sbjct: 309 LSLYKMLLNCLAKSGDVSAVQSVADDMIRVSQIPEHDVHVCVLKSYCV 356


>ref|XP_002269283.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g06400, mitochondrial-like [Vitis vinifera]
          Length = 1048

 Score =  129 bits (323), Expect = 3e-28
 Identities = 57/108 (52%), Positives = 84/108 (77%)
 Frame = -3

Query: 378 YGKAKRISKTLMLFERMRKCGCEPDGTLYEVIVYALCNAGEGDIAMEFYKEMVCKNIEVD 199
           YGKAK I K L++ E+M K GCEPD   Y +++ +LCNA + DIA+EFYKEMV K + +D
Sbjct: 250 YGKAKLIGKALLILEKMWKSGCEPDVAAYMILIRSLCNAQKADIALEFYKEMVQKEMGLD 309

Query: 198 MNLYKVLMNCLSRSGNILDVRLVGEDMMNVSQVPQQKVYSCILRSFCV 55
           M+LY++L+ CL+ SG+I  V+LV +DM+  SQ+P++ V+SC+L+SFC+
Sbjct: 310 MSLYELLLTCLAGSGDIAGVQLVADDMIRRSQIPERDVFSCMLKSFCI 357


>ref|XP_002524089.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223536657|gb|EEF38299.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 1072

 Score =  125 bits (314), Expect = 4e-27
 Identities = 54/108 (50%), Positives = 84/108 (77%)
 Frame = -3

Query: 378 YGKAKRISKTLMLFERMRKCGCEPDGTLYEVIVYALCNAGEGDIAMEFYKEMVCKNIEVD 199
           +GKAK I K L+ FE+M+  GCEPD  +Y+++V++LCNAG+G++A+ FYKEMV K++ +D
Sbjct: 255 FGKAKLIGKALLFFEKMKTSGCEPDEKIYKMMVHSLCNAGKGEVALAFYKEMVQKDMRLD 314

Query: 198 MNLYKVLMNCLSRSGNILDVRLVGEDMMNVSQVPQQKVYSCILRSFCV 55
           ++LYK+L+  +++SG++  V LV  DM  +SQ+P+  V  CIL+SFCV
Sbjct: 315 LSLYKILLISMAKSGDVGAVHLVANDMSRLSQIPEHDVNVCILKSFCV 362