BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032561
         (289 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003529283.1| PREDICTED: pentatricopeptide repeat-containi...    83   3e-14
ref|XP_003530996.1| PREDICTED: pentatricopeptide repeat-containi...    82   5e-14
emb|CBI41008.3| unnamed protein product [Vitis vinifera]               82   6e-14
ref|XP_002518584.1| pentatricopeptide repeat-containing protein,...    82   6e-14
ref|XP_002268636.2| PREDICTED: pentatricopeptide repeat-containi...    81   8e-14

>ref|XP_003529283.1| PREDICTED: pentatricopeptide repeat-containing protein At1g55890,
           mitochondrial-like [Glycine max]
          Length = 379

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 42/90 (46%), Positives = 59/90 (65%)
 Frame = -2

Query: 270 ANPTAPTRKDLIDNLFKEKTLAILVENFKKLSARPWFRKNDKIYVKVIRRLALAKELPKI 91
           A   A + + + ++L+KE  L  +VE FKK S    FRK   IY   +RRLA A+    +
Sbjct: 16  ATTIAASIRSISEDLYKEVKLKNVVEKFKKASDNDRFRKKTGIYEDTVRRLAGARRFRWV 75

Query: 90  EEVLEHQKKFDDITNEGFAMRLISLYGKAG 1
            ++LEHQK++ DI+NEGF+ RLISLYGK+G
Sbjct: 76  RDILEHQKQYSDISNEGFSARLISLYGKSG 105


>ref|XP_003530996.1| PREDICTED: pentatricopeptide repeat-containing protein At1g55890,
           mitochondrial-like [Glycine max]
          Length = 381

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 42/82 (51%), Positives = 56/82 (68%)
 Frame = -2

Query: 246 KDLIDNLFKEKTLAILVENFKKLSARPWFRKNDKIYVKVIRRLALAKELPKIEEVLEHQK 67
           K + ++L+KE  L  +VE FKK S    FRK   IY   +RRLA A+    I ++LEHQK
Sbjct: 26  KSISEDLYKEVKLKNVVEKFKKASDIDRFRKKTGIYEDTVRRLAGARRFRWIRDILEHQK 85

Query: 66  KFDDITNEGFAMRLISLYGKAG 1
           ++ DI+NEGF+ RLISLYGK+G
Sbjct: 86  QYSDISNEGFSARLISLYGKSG 107


>emb|CBI41008.3| unnamed protein product [Vitis vinifera]
          Length = 379

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 44/96 (45%), Positives = 62/96 (64%), Gaps = 5/96 (5%)
 Frame = -2

Query: 273 LANPTAPTR-----KDLIDNLFKEKTLAILVENFKKLSARPWFRKNDKIYVKVIRRLALA 109
           L +P+A  +     + +  ++++E+ L  LV+ FKK S    FR    IY + +RRLA A
Sbjct: 21  LVSPSATAQATGNLESVFKDIYRERNLKRLVQKFKKSSELDRFRTKTGIYEETVRRLASA 80

Query: 108 KELPKIEEVLEHQKKFDDITNEGFAMRLISLYGKAG 1
           K    IEE+LE QKK+ DI+ EGFA+RLISLYGK+G
Sbjct: 81  KRFRWIEEILEEQKKYKDISREGFAVRLISLYGKSG 116


>ref|XP_002518584.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223542429|gb|EEF43971.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 377

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 39/74 (52%), Positives = 51/74 (68%)
 Frame = -2

Query: 222 KEKTLAILVENFKKLSARPWFRKNDKIYVKVIRRLALAKELPKIEEVLEHQKKFDDITNE 43
           KE+ L  LV+ +K+ S  P FR   + Y  ++RRL+ AK+   +E+ LEHQK F DITNE
Sbjct: 31  KERKLQKLVQRYKRSSESPEFRARHRFYSTIVRRLSFAKQFSMVEDFLEHQKNFADITNE 90

Query: 42  GFAMRLISLYGKAG 1
            F +RLISLYGKAG
Sbjct: 91  QFTIRLISLYGKAG 104


>ref|XP_002268636.2| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
           mitochondrial [Vitis vinifera]
          Length = 383

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 41/82 (50%), Positives = 56/82 (68%)
 Frame = -2

Query: 246 KDLIDNLFKEKTLAILVENFKKLSARPWFRKNDKIYVKVIRRLALAKELPKIEEVLEHQK 67
           + +  ++++E+ L  LV+ FKK S    FR    IY + +RRLA AK    IEE+LE QK
Sbjct: 27  ESVFKDIYRERNLKRLVQKFKKSSELDRFRTKTGIYEETVRRLASAKRFRWIEEILEEQK 86

Query: 66  KFDDITNEGFAMRLISLYGKAG 1
           K+ DI+ EGFA+RLISLYGK+G
Sbjct: 87  KYKDISREGFAVRLISLYGKSG 108