BLASTX nr result

ID: Coptis24_contig00032518 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032518
         (359 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263747.2| PREDICTED: tRNA dimethylallyltransferase 2 [...   182   2e-44
gb|AFK41335.1| unknown [Lotus japonicus]                              179   2e-43
gb|ABW77761.1| tRNA isopentenyltransferase [Lotus japonicus]          179   2e-43
ref|XP_002529084.1| tRNA delta(2)-isopentenylpyrophosphate trans...   178   5e-43
ref|XP_003606240.1| tRNA isopentenyltransferase [Medicago trunca...   170   1e-40

>ref|XP_002263747.2| PREDICTED: tRNA dimethylallyltransferase 2 [Vitis vinifera]
           gi|297734839|emb|CBI17073.3| unnamed protein product
           [Vitis vinifera]
          Length = 474

 Score =  182 bits (462), Expect = 2e-44
 Identities = 85/109 (77%), Positives = 99/109 (90%)
 Frame = -3

Query: 357 RIHPNDWRKINQYLGLYARSGVLPSKLFRGEASKNWGRADDFRYDCCFICLDASVNVLDQ 178
           RIHPND RKINQYLGLYAR+GVLPSKLF+G+A +NWGR D+F+Y CCFIC+DA++ +LD 
Sbjct: 180 RIHPNDHRKINQYLGLYARTGVLPSKLFQGKAMENWGRVDNFKYRCCFICVDAALPILDG 239

Query: 177 YVEQRVDCMIDAGLLNEVYDIFTLHADYTRGLRQAIGVREFEDFLKCYL 31
           YV QRVD MIDAGLL+EVYDI++L+ADYTRGLRQAIGVREFEDFLK  L
Sbjct: 240 YVGQRVDSMIDAGLLDEVYDIYSLNADYTRGLRQAIGVREFEDFLKVLL 288


>gb|AFK41335.1| unknown [Lotus japonicus]
          Length = 476

 Score =  179 bits (455), Expect = 2e-43
 Identities = 80/114 (70%), Positives = 101/114 (88%)
 Frame = -3

Query: 357 RIHPNDWRKINQYLGLYARSGVLPSKLFRGEASKNWGRADDFRYDCCFICLDASVNVLDQ 178
           RIHPN+ RKINQY+ LYAR+GVLPSK+F+GEA++ WG+ D+ RYDCCFIC+DAS+ VLD+
Sbjct: 180 RIHPNNHRKINQYISLYARTGVLPSKVFQGEAAEKWGQVDNLRYDCCFICVDASLPVLDR 239

Query: 177 YVEQRVDCMIDAGLLNEVYDIFTLHADYTRGLRQAIGVREFEDFLKCYLVDKFF 16
           YVEQRVDCM+DAGLLNEVYDI+ L+ADY+RGLRQAIGVREFE  L+ +++   +
Sbjct: 240 YVEQRVDCMMDAGLLNEVYDIYNLNADYSRGLRQAIGVREFEPLLRTFVLKDIY 293


>gb|ABW77761.1| tRNA isopentenyltransferase [Lotus japonicus]
          Length = 477

 Score =  179 bits (454), Expect = 2e-43
 Identities = 80/114 (70%), Positives = 100/114 (87%)
 Frame = -3

Query: 357 RIHPNDWRKINQYLGLYARSGVLPSKLFRGEASKNWGRADDFRYDCCFICLDASVNVLDQ 178
           RIHPN+ RKINQY+ LYAR+GVLPSK+F+GEA + WG+ D+ RYDCCFIC+DAS+ VLD+
Sbjct: 181 RIHPNNHRKINQYISLYARTGVLPSKVFQGEAGQKWGQVDNLRYDCCFICVDASLPVLDR 240

Query: 177 YVEQRVDCMIDAGLLNEVYDIFTLHADYTRGLRQAIGVREFEDFLKCYLVDKFF 16
           YVEQRVDCM+DAGLLNEVYDI+ L+ADY+RGLRQAIGVREFE  L+ +++   +
Sbjct: 241 YVEQRVDCMMDAGLLNEVYDIYNLNADYSRGLRQAIGVREFEPLLRTFVLKDIY 294


>ref|XP_002529084.1| tRNA delta(2)-isopentenylpyrophosphate transferase, putative
           [Ricinus communis] gi|223531496|gb|EEF33328.1| tRNA
           delta(2)-isopentenylpyrophosphate transferase, putative
           [Ricinus communis]
          Length = 453

 Score =  178 bits (451), Expect = 5e-43
 Identities = 82/111 (73%), Positives = 97/111 (87%)
 Frame = -3

Query: 357 RIHPNDWRKINQYLGLYARSGVLPSKLFRGEASKNWGRADDFRYDCCFICLDASVNVLDQ 178
           R+HPN+ RKINQYL LYARSG+LPSKL+ G+A++NWGR D+ R+DCCFIC+DA+  VLDQ
Sbjct: 155 RVHPNNHRKINQYLNLYARSGILPSKLYLGKAAENWGRIDNCRFDCCFICVDAATPVLDQ 214

Query: 177 YVEQRVDCMIDAGLLNEVYDIFTLHADYTRGLRQAIGVREFEDFLKCYLVD 25
           YV QRVDCMIDAGLL EVYDI+  +ADYTRGL+QAIGVREFED L+ YL D
Sbjct: 215 YVGQRVDCMIDAGLLCEVYDIYNPYADYTRGLQQAIGVREFEDVLRAYLSD 265


>ref|XP_003606240.1| tRNA isopentenyltransferase [Medicago truncatula]
           gi|355507295|gb|AES88437.1| tRNA isopentenyltransferase
           [Medicago truncatula]
          Length = 481

 Score =  170 bits (431), Expect = 1e-40
 Identities = 77/106 (72%), Positives = 97/106 (91%)
 Frame = -3

Query: 357 RIHPNDWRKINQYLGLYARSGVLPSKLFRGEASKNWGRADDFRYDCCFICLDASVNVLDQ 178
           RIHPN+ RKINQY+ LY+R+GVLPSK+F+G+A++ WG+AD+ RY CCFI +DAS+ +LD+
Sbjct: 177 RIHPNNHRKINQYISLYSRTGVLPSKVFQGQAAEKWGQADNLRYACCFISVDASLPILDR 236

Query: 177 YVEQRVDCMIDAGLLNEVYDIFTLHADYTRGLRQAIGVREFEDFLK 40
           YVEQRVD M+DAGLLNEVYDI+T++ADYTRGLRQAIGVREFED L+
Sbjct: 237 YVEQRVDDMMDAGLLNEVYDIYTMNADYTRGLRQAIGVREFEDLLR 282


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