BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032498
         (366 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332354.1| predicted protein [Populus trichocarpa] gi|2...   111   7e-23
ref|XP_002280513.1| PREDICTED: pentatricopeptide repeat-containi...   110   2e-22
gb|AFK47126.1| unknown [Medicago truncatula]                          108   6e-22
ref|XP_003630737.1| Pentatricopeptide repeat-containing protein ...   108   6e-22
ref|XP_002514235.1| pentatricopeptide repeat-containing protein,...   107   8e-22

>ref|XP_002332354.1| predicted protein [Populus trichocarpa] gi|222832075|gb|EEE70552.1|
           predicted protein [Populus trichocarpa]
          Length = 254

 Score =  111 bits (277), Expect = 7e-23
 Identities = 55/120 (45%), Positives = 78/120 (65%)
 Frame = -3

Query: 364 SLHTLNQIHTKIIRTSGVKLRENAFFWNNIIRPYVRFDSPSLALGVYLLMARNNVHPDFY 185
           SL  LNQ +  +IRT  + +    F WNN+IR Y R  +P+ AL +Y+ M+   + PD Y
Sbjct: 18  SLQELNQTYAHVIRTHVLDVYTAPFHWNNLIRCYTRLGAPNKALQIYVSMSHAGISPDNY 77

Query: 184 TIPIVLKAXXXXXXXXXXXXXXXVALKLGLDLFEFCESGFINLYAKAGDFGNARKVFEQS 5
           T+PIVLKA               +A++LGL+L E+CESGFI+LY+K+GDFG+A KVFE++
Sbjct: 78  TLPIVLKAACQCFSMELGRQLHSIAIRLGLELNEYCESGFISLYSKSGDFGDAYKVFEEN 137


>ref|XP_002280513.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77170
           [Vitis vinifera] gi|297738768|emb|CBI28013.3| unnamed
           protein product [Vitis vinifera]
          Length = 479

 Score =  110 bits (274), Expect = 2e-22
 Identities = 59/120 (49%), Positives = 77/120 (64%)
 Frame = -3

Query: 364 SLHTLNQIHTKIIRTSGVKLRENAFFWNNIIRPYVRFDSPSLALGVYLLMARNNVHPDFY 185
           +L  LNQ+   IIRT  ++L    F WNNIIR Y R ++   AL +Y+ M+R  V PD Y
Sbjct: 71  NLIELNQLLAHIIRTHFLELYPAPFQWNNIIRSYTRLEAHHYALSIYIAMSRAGVSPDSY 130

Query: 184 TIPIVLKAXXXXXXXXXXXXXXXVALKLGLDLFEFCESGFINLYAKAGDFGNARKVFEQS 5
           TIPIVLKA               VA++ GL+L E+CESGFI++Y+KAG+F NA KVFEQ+
Sbjct: 131 TIPIVLKAVCQAFATGFGRQVHSVAIRHGLELNEYCESGFISVYSKAGEFQNAHKVFEQN 190


>gb|AFK47126.1| unknown [Medicago truncatula]
          Length = 447

 Score =  108 bits (269), Expect = 6e-22
 Identities = 56/119 (47%), Positives = 72/119 (60%)
 Frame = -3

Query: 361 LHTLNQIHTKIIRTSGVKLRENAFFWNNIIRPYVRFDSPSLALGVYLLMARNNVHPDFYT 182
           +  LNQI+  I+ T  ++    +F WNNIIR Y R +SP  AL +Y+ M R  V PD YT
Sbjct: 40  IRDLNQIYAHILLTRFLESNPASFNWNNIIRSYTRLESPQNALRIYVSMLRAGVLPDRYT 99

Query: 181 IPIVLKAXXXXXXXXXXXXXXXVALKLGLDLFEFCESGFINLYAKAGDFGNARKVFEQS 5
           +PIVLKA                 +KLGL   E+CESGFINLY KAGDF +A KVF+++
Sbjct: 100 LPIVLKAVSQSFAIQLGQQVHSYGIKLGLQSNEYCESGFINLYCKAGDFDSAHKVFDEN 158


>ref|XP_003630737.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355524759|gb|AET05213.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 447

 Score =  108 bits (269), Expect = 6e-22
 Identities = 56/119 (47%), Positives = 72/119 (60%)
 Frame = -3

Query: 361 LHTLNQIHTKIIRTSGVKLRENAFFWNNIIRPYVRFDSPSLALGVYLLMARNNVHPDFYT 182
           +  LNQI+  I+ T  ++    +F WNNIIR Y R +SP  AL +Y+ M R  V PD YT
Sbjct: 40  IRDLNQIYAHILLTRFLESNPASFNWNNIIRSYTRLESPQNALRIYVSMLRAGVLPDRYT 99

Query: 181 IPIVLKAXXXXXXXXXXXXXXXVALKLGLDLFEFCESGFINLYAKAGDFGNARKVFEQS 5
           +PIVLKA                 +KLGL   E+CESGFINLY KAGDF +A KVF+++
Sbjct: 100 LPIVLKAVSQSFAIQLGQQVHSYGIKLGLQSNEYCESGFINLYCKAGDFDSAHKVFDEN 158


>ref|XP_002514235.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223546691|gb|EEF48189.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 352

 Score =  107 bits (268), Expect = 8e-22
 Identities = 57/121 (47%), Positives = 75/121 (61%)
 Frame = -3

Query: 364 SLHTLNQIHTKIIRTSGVKLRENAFFWNNIIRPYVRFDSPSLALGVYLLMARNNVHPDFY 185
           +L  LNQI+  II +  +      F WNNIIR Y R D+P  AL VY+ M+R  V PD Y
Sbjct: 65  TLRDLNQIYAHIICSDLLHFYSAPFHWNNIIRSYTRLDAPVKALQVYISMSRAGVLPDSY 124

Query: 184 TIPIVLKAXXXXXXXXXXXXXXXVALKLGLDLFEFCESGFINLYAKAGDFGNARKVFEQS 5
           T+PIVLKA               VA++LGL+  E+CESGFI+ Y+K+GD  NA K+FE++
Sbjct: 125 TLPIVLKAACQIFSIEIGKQLQSVAIRLGLESNEYCESGFISFYSKSGDIKNAYKMFEEN 184

Query: 4   P 2
           P
Sbjct: 185 P 185