BLASTX nr result
ID: Coptis24_contig00032473
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00032473 (333 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABR68690.1| oxalate oxidase [Theobroma cacao] 75 4e-15 ref|XP_002319674.1| predicted protein [Populus trichocarpa] gi|2... 73 6e-14 ref|XP_002333092.1| predicted protein [Populus trichocarpa] gi|2... 73 6e-14 ref|XP_002333091.1| predicted protein [Populus trichocarpa] gi|2... 73 6e-14 ref|XP_002276756.2| PREDICTED: putative germin-like protein 2-1-... 74 1e-12 >gb|ABR68690.1| oxalate oxidase [Theobroma cacao] Length = 144 Score = 75.1 bits (183), Expect(2) = 4e-15 Identities = 33/43 (76%), Positives = 39/43 (90%) Frame = -3 Query: 130 LQDFCVAINETKDGVFVNGKFCKGPELASANDFFLRGLHIPGN 2 LQDFCVAIN+TK+GVFVNGKFCK P+LA A+DFF GL++PGN Sbjct: 29 LQDFCVAINDTKNGVFVNGKFCKDPKLAVADDFFYSGLNMPGN 71 Score = 30.8 bits (68), Expect(2) = 4e-15 Identities = 18/27 (66%), Positives = 18/27 (66%), Gaps = 1/27 (3%) Frame = -2 Query: 287 MGTIFVAFTLLAFA-SFVLASDPSPLQ 210 M VAFTLLAFA S A DPSPLQ Sbjct: 4 MRCFLVAFTLLAFANSLASAFDPSPLQ 30 >ref|XP_002319674.1| predicted protein [Populus trichocarpa] gi|222858050|gb|EEE95597.1| predicted protein [Populus trichocarpa] Length = 225 Score = 73.2 bits (178), Expect(2) = 6e-14 Identities = 33/43 (76%), Positives = 37/43 (86%) Frame = -3 Query: 130 LQDFCVAINETKDGVFVNGKFCKGPELASANDFFLRGLHIPGN 2 LQDFCVAIN+TKDGVFVNGKFCK P+LA+ NDFF GL+I N Sbjct: 28 LQDFCVAINDTKDGVFVNGKFCKDPKLATENDFFFPGLNIARN 70 Score = 28.9 bits (63), Expect(2) = 6e-14 Identities = 15/20 (75%), Positives = 15/20 (75%), Gaps = 1/20 (5%) Frame = -2 Query: 266 FTLLAFA-SFVLASDPSPLQ 210 F LAFA SF ASDPSPLQ Sbjct: 10 FVFLAFAASFAFASDPSPLQ 29 >ref|XP_002333092.1| predicted protein [Populus trichocarpa] gi|222834858|gb|EEE73307.1| predicted protein [Populus trichocarpa] Length = 225 Score = 73.2 bits (178), Expect(2) = 6e-14 Identities = 33/43 (76%), Positives = 37/43 (86%) Frame = -3 Query: 130 LQDFCVAINETKDGVFVNGKFCKGPELASANDFFLRGLHIPGN 2 LQDFCVAIN+TKDGVFVNGKFCK P+LA+ NDFF GL+I N Sbjct: 28 LQDFCVAINDTKDGVFVNGKFCKDPKLATENDFFFPGLNIARN 70 Score = 28.9 bits (63), Expect(2) = 6e-14 Identities = 15/20 (75%), Positives = 15/20 (75%), Gaps = 1/20 (5%) Frame = -2 Query: 266 FTLLAFA-SFVLASDPSPLQ 210 F LAFA SF ASDPSPLQ Sbjct: 10 FVFLAFAASFAFASDPSPLQ 29 >ref|XP_002333091.1| predicted protein [Populus trichocarpa] gi|222834857|gb|EEE73306.1| predicted protein [Populus trichocarpa] Length = 225 Score = 73.2 bits (178), Expect(2) = 6e-14 Identities = 33/43 (76%), Positives = 37/43 (86%) Frame = -3 Query: 130 LQDFCVAINETKDGVFVNGKFCKGPELASANDFFLRGLHIPGN 2 LQDFCVAIN+TKDGVFVNGKFCK P+LA+ NDFF GL+I N Sbjct: 28 LQDFCVAINDTKDGVFVNGKFCKDPKLATENDFFFPGLNIARN 70 Score = 28.9 bits (63), Expect(2) = 6e-14 Identities = 15/20 (75%), Positives = 15/20 (75%), Gaps = 1/20 (5%) Frame = -2 Query: 266 FTLLAFA-SFVLASDPSPLQ 210 F LAFA SF ASDPSPLQ Sbjct: 10 FVFLAFAASFAFASDPSPLQ 29 >ref|XP_002276756.2| PREDICTED: putative germin-like protein 2-1-like [Vitis vinifera] Length = 228 Score = 74.3 bits (181), Expect(2) = 1e-12 Identities = 31/43 (72%), Positives = 36/43 (83%) Frame = -3 Query: 130 LQDFCVAINETKDGVFVNGKFCKGPELASANDFFLRGLHIPGN 2 LQDFCVA+N+T D VFVNGKFCK P+LA+ NDFF GL +PGN Sbjct: 30 LQDFCVAVNDTNDSVFVNGKFCKDPKLATPNDFFFSGLRVPGN 72 Score = 23.5 bits (49), Expect(2) = 1e-12 Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 2/28 (7%) Frame = -2 Query: 287 MGTIFVAFTLLAFASFVLAS--DPSPLQ 210 MG +A+ +L +F +AS DPSPLQ Sbjct: 4 MGASTLAYIVLLAMAFSVASASDPSPLQ 31