BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032462
         (346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA98491.1| retrotransposon protein, putative, unclassified [...    65   4e-10
gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japo...    64   1e-09
gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza ...    64   1e-09
gb|AAP53315.2| retrotransposon protein, putative, unclassified [...    64   1e-09
gb|EEE51862.1| hypothetical protein OsJ_33393 [Oryza sativa Japo...    62   3e-09

>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1621

 Score = 65.1 bits (157), Expect(2) = 4e-10
 Identities = 30/86 (34%), Positives = 50/86 (58%)
 Frame = +2

Query: 5    YSNDSIIFCKAYSQQSYNMMNLLNTYYEASGQAINFDKSMAYFSGNVSIRTQKSIMKKWK 184
            +++DS+I C+A   ++  +  +L  Y E SGQ IN DKS   FS N S   ++++M    
Sbjct: 937  FADDSLILCRANGGEAQQLQTILQIYEECSGQVINKDKSAVMFSPNTSSLEKRAVMAALN 996

Query: 185  IRKFDDKEIYLGVPILLSRKKVKILS 262
            +++    E YLG+P+ + R + KI S
Sbjct: 997  MQRETTNERYLGLPVFVGRSRTKIFS 1022



 Score = 23.9 bits (50), Expect(2) = 4e-10
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +1

Query: 256  FEFFLHNVQRKISSWKAKVLSLSFGSTLIK 345
            F +    + ++I  WK K+LS +    LIK
Sbjct: 1021 FSYLKERIWQRIQGWKEKLLSRAGKEILIK 1050


>gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japonica Group]
          Length = 1594

 Score = 63.5 bits (153), Expect(2) = 1e-09
 Identities = 30/86 (34%), Positives = 49/86 (56%)
 Frame = +2

Query: 5    YSNDSIIFCKAYSQQSYNMMNLLNTYYEASGQAINFDKSMAYFSGNVSIRTQKSIMKKWK 184
            +++DS+I C+A   ++  +  +L  Y E SGQ IN DKS   FS N S   + ++M    
Sbjct: 910  FADDSLILCRANGGEAQQLQTILQIYEECSGQVINKDKSAVMFSPNTSSLEKGAVMAALN 969

Query: 185  IRKFDDKEIYLGVPILLSRKKVKILS 262
            +++    E YLG+P+ + R + KI S
Sbjct: 970  MQRETTNEKYLGLPVFVGRSRTKIFS 995



 Score = 23.9 bits (50), Expect(2) = 1e-09
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +1

Query: 256  FEFFLHNVQRKISSWKAKVLSLSFGSTLIK 345
            F +    + ++I  WK K+LS +    LIK
Sbjct: 994  FSYLKERIWQRIQGWKEKLLSRAGKEILIK 1023


>gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza sativa Japonica Group]
          Length = 1509

 Score = 63.5 bits (153), Expect(2) = 1e-09
 Identities = 30/86 (34%), Positives = 49/86 (56%)
 Frame = +2

Query: 5    YSNDSIIFCKAYSQQSYNMMNLLNTYYEASGQAINFDKSMAYFSGNVSIRTQKSIMKKWK 184
            +++DS+I C+A   ++  +  +L  Y E SGQ IN DKS   FS N S   + ++M    
Sbjct: 882  FADDSLILCRANGGEAQQLQTILQIYEECSGQVINKDKSAVMFSPNTSSLEKGAVMAALN 941

Query: 185  IRKFDDKEIYLGVPILLSRKKVKILS 262
            +++    E YLG+P+ + R + KI S
Sbjct: 942  MQRETTNEKYLGLPVFVGRSRTKIFS 967



 Score = 23.9 bits (50), Expect(2) = 1e-09
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +1

Query: 256  FEFFLHNVQRKISSWKAKVLSLSFGSTLIK 345
            F +    + ++I  WK K+LS +    LIK
Sbjct: 966  FSYLKERIWQRIQGWKEKLLSRAGKEILIK 995


>gb|AAP53315.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1505

 Score = 63.5 bits (153), Expect(2) = 1e-09
 Identities = 30/86 (34%), Positives = 49/86 (56%)
 Frame = +2

Query: 5    YSNDSIIFCKAYSQQSYNMMNLLNTYYEASGQAINFDKSMAYFSGNVSIRTQKSIMKKWK 184
            +++DS+I C+A   ++  +  +L  Y E SGQ IN DKS   FS N S   + ++M    
Sbjct: 878  FADDSLILCRANGGEAQQLQTILQIYEECSGQVINKDKSAVMFSPNTSSLEKGAVMAALN 937

Query: 185  IRKFDDKEIYLGVPILLSRKKVKILS 262
            +++    E YLG+P+ + R + KI S
Sbjct: 938  MQRETTNEKYLGLPVFVGRSRTKIFS 963



 Score = 23.9 bits (50), Expect(2) = 1e-09
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +1

Query: 256  FEFFLHNVQRKISSWKAKVLSLSFGSTLIK 345
            F +    + ++I  WK K+LS +    LIK
Sbjct: 962  FSYLKERIWQRIQGWKEKLLSRAGKEILIK 991


>gb|EEE51862.1| hypothetical protein OsJ_33393 [Oryza sativa Japonica Group]
          Length = 662

 Score = 62.0 bits (149), Expect(2) = 3e-09
 Identities = 29/86 (33%), Positives = 49/86 (56%)
 Frame = +2

Query: 5   YSNDSIIFCKAYSQQSYNMMNLLNTYYEASGQAINFDKSMAYFSGNVSIRTQKSIMKKWK 184
           +++DS+I C+A    + N+ N+L  Y E SGQ +N +K    FS N     ++ +M+  +
Sbjct: 368 FADDSLIPCRANRGDAQNLQNILTLYEEFSGQMLNKEKFAIMFSSNTGSEKRREVMQTLQ 427

Query: 185 IRKFDDKEIYLGVPILLSRKKVKILS 262
           I K    E YLG+P+ + R K K+ +
Sbjct: 428 INKQTMNERYLGLPVFVGRDKTKVFA 453



 Score = 24.3 bits (51), Expect(2) = 3e-09
 Identities = 10/35 (28%), Positives = 20/35 (57%)
 Frame = +1

Query: 241 EESEDFEFFLHNVQRKISSWKAKVLSLSFGSTLIK 345
           ++++ F +    + ++I  WK K+LS +    LIK
Sbjct: 447 DKTKVFAYLKDRIWKRIQGWKEKMLSRAGKEILIK 481