BLASTX nr result

ID: Coptis24_contig00032461 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032461
         (354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81001.1| hypothetical protein VITISV_006992 [Vitis vinifera]   114   6e-24
emb|CAN74230.1| hypothetical protein VITISV_000585 [Vitis vinifera]   112   3e-23
ref|XP_002317615.1| predicted protein [Populus trichocarpa] gi|2...   106   2e-21
emb|CAN74819.1| hypothetical protein VITISV_034590 [Vitis vinifera]   106   2e-21
emb|CAN73437.1| hypothetical protein VITISV_031733 [Vitis vinifera]   106   2e-21

>emb|CAN81001.1| hypothetical protein VITISV_006992 [Vitis vinifera]
          Length = 1131

 Score =  114 bits (286), Expect = 6e-24
 Identities = 50/112 (44%), Positives = 75/112 (66%)
 Frame = -2

Query: 338 WSRCDDLVASWILNSVTPDIRGSILYADSASEIWKDLSDRFSQTNAPKVFQLKDSVTLLK 159
           W RC+D+V SW+LNS+ PDI  S++YA++ SEIW DL +RFSQ N  +++Q+K  +   +
Sbjct: 77  WQRCNDMVISWLLNSIHPDIASSVIYAETTSEIWADLRERFSQGNDSRIYQIKRDIVEHR 136

Query: 158 QDNRLVSVYFTLLKSFWDELSFLSTMPACTCGHASIFAKEVEDGRSMKFMQG 3
           Q  + +SVY+T LK+FWDELS    + +C+CG      +  E  R M+F+ G
Sbjct: 137 QGQQSISVYYTKLKAFWDELSSYHEVLSCSCGGLEKLKEMDEKERVMQFLMG 188


>emb|CAN74230.1| hypothetical protein VITISV_000585 [Vitis vinifera]
          Length = 334

 Score =  112 bits (280), Expect = 3e-23
 Identities = 50/112 (44%), Positives = 75/112 (66%)
 Frame = -2

Query: 338 WSRCDDLVASWILNSVTPDIRGSILYADSASEIWKDLSDRFSQTNAPKVFQLKDSVTLLK 159
           W RC+D+V SW+LNS+ PDI  S++YA++ASEIW DL +RFSQ N  +++Q+K  +   +
Sbjct: 80  WQRCNDMVISWLLNSIHPDIASSVIYAETASEIWADLRERFSQGNDSRIYQIKRDIVEHR 139

Query: 158 QDNRLVSVYFTLLKSFWDELSFLSTMPACTCGHASIFAKEVEDGRSMKFMQG 3
           Q  + +SVY+T LK+F DELS    + +C+CG      +  E  R M+F+ G
Sbjct: 140 QGQQSISVYYTKLKAFXDELSSYHEVLSCSCGGLEKLKERDEKERVMQFLMG 191


>ref|XP_002317615.1| predicted protein [Populus trichocarpa] gi|222860680|gb|EEE98227.1|
           predicted protein [Populus trichocarpa]
          Length = 278

 Score =  106 bits (265), Expect = 2e-21
 Identities = 44/112 (39%), Positives = 71/112 (63%)
 Frame = -2

Query: 338 WSRCDDLVASWILNSVTPDIRGSILYADSASEIWKDLSDRFSQTNAPKVFQLKDSVTLLK 159
           W RC+D+V SWI N+V+ DI+ ++++ D A  +W +L+DRF+Q N  ++FQL+  +  L+
Sbjct: 92  WERCNDMVVSWIQNAVSTDIKHTLVFVDDAQMVWTELNDRFTQQNGHRIFQLRRDLATLR 151

Query: 158 QDNRLVSVYFTLLKSFWDELSFLSTMPACTCGHASIFAKEVEDGRSMKFMQG 3
           QD   VS YF  LK+ WDE+   + MP CTCG   +  +  +    ++F+ G
Sbjct: 152 QDKDSVSSYFGNLKTLWDEMIVYNPMPLCTCGQLKVLNERYQRDYVIQFLMG 203


>emb|CAN74819.1| hypothetical protein VITISV_034590 [Vitis vinifera]
          Length = 970

 Score =  106 bits (265), Expect = 2e-21
 Identities = 50/112 (44%), Positives = 67/112 (59%)
 Frame = -2

Query: 338 WSRCDDLVASWILNSVTPDIRGSILYADSASEIWKDLSDRFSQTNAPKVFQLKDSVTLLK 159
           W RC+ +V SWILNSV  DI  S+LY D+A  IW DL DRF Q+N P++FQ+K  +  L 
Sbjct: 87  WIRCNSMVISWILNSVHKDIADSLLYFDTAVGIWNDLRDRFCQSNGPRIFQIKKHLIALS 146

Query: 158 QDNRLVSVYFTLLKSFWDELSFLSTMPACTCGHASIFAKEVEDGRSMKFMQG 3
           Q +  VS Y+T LK  WDEL     +P C CG    + +  +    M+F+ G
Sbjct: 147 QGSLDVSTYYTRLKILWDELKGFQPLPECACGTMKTWMEFQQQEYVMQFLMG 198


>emb|CAN73437.1| hypothetical protein VITISV_031733 [Vitis vinifera]
          Length = 1322

 Score =  106 bits (265), Expect = 2e-21
 Identities = 48/117 (41%), Positives = 78/117 (66%), Gaps = 1/117 (0%)
 Frame = -2

Query: 350 EKSKWSRCDDLVASWILNSVTPDIRGSILYADSASEIWKDLSDRFSQTNAPKVFQLKDSV 171
           E + W +C+D++ SWILNS++ D+  S++++ +A E+W+DL DRFSQ+NAP++FQ++  +
Sbjct: 29  EHASWKKCNDMILSWILNSLSQDLADSVIFSTTAQEVWEDLRDRFSQSNAPRIFQIERGI 88

Query: 170 TLLKQDNRLVSVYFTLLKSFWDEL-SFLSTMPACTCGHASIFAKEVEDGRSMKFMQG 3
             L QD   V+ Y+T LK  WDEL S+  T+  C+CG       + +  R M+F+ G
Sbjct: 89  ACLTQDQMTVAAYYTRLKKLWDELGSYNDTV--CSCG------ADYKRRRLMQFLMG 137


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