BLASTX nr result

ID: Coptis24_contig00032457 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032457
         (289 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510704.1| Glucan endo-1,3-beta-glucosidase precursor, ...   162   3e-38
emb|CBI40742.3| unnamed protein product [Vitis vinifera]              161   5e-38
ref|XP_002272900.1| PREDICTED: glucan endo-1,3-beta-glucosidase ...   161   5e-38
gb|AFU52645.1| beta-1,3-glucanase 10 [Solanum tuberosum]              149   2e-34
ref|XP_002307804.1| predicted protein [Populus trichocarpa] gi|2...   101   6e-20

>ref|XP_002510704.1| Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus
           communis] gi|223551405|gb|EEF52891.1| Glucan
           endo-1,3-beta-glucosidase precursor, putative [Ricinus
           communis]
          Length = 458

 Score =  162 bits (410), Expect = 3e-38
 Identities = 75/95 (78%), Positives = 81/95 (85%)
 Frame = -1

Query: 289 FALFNENKKEGSVSERNFGLFNGDGSKVYEVDLTCKFCSNGGEKFGFGEKALGSLRGPSV 110
           FALFNENKK G VSERNFG+FNGDGSKVYEVDL+C+FCSNGG  F FGEK     RGPSV
Sbjct: 312 FALFNENKKGGDVSERNFGIFNGDGSKVYEVDLSCQFCSNGGT-FEFGEKVSSGARGPSV 370

Query: 109 WCVAKPHADEKVLQAVLDFCCGTGGVNCKELINQG 5
           WCVAKPHADEKVLQAVLDFCCG GGV+C+E+   G
Sbjct: 371 WCVAKPHADEKVLQAVLDFCCGPGGVDCREIYESG 405


>emb|CBI40742.3| unnamed protein product [Vitis vinifera]
          Length = 485

 Score =  161 bits (408), Expect = 5e-38
 Identities = 72/95 (75%), Positives = 79/95 (83%)
 Frame = -1

Query: 289 FALFNENKKEGSVSERNFGLFNGDGSKVYEVDLTCKFCSNGGEKFGFGEKALGSLRGPSV 110
           FALFNENKK G VSERNFG+ NGDGSKVYE+DL+CKFCS  G   GFGEK   + RGPSV
Sbjct: 338 FALFNENKKGGGVSERNFGILNGDGSKVYEIDLSCKFCSGNGGAVGFGEKVANAARGPSV 397

Query: 109 WCVAKPHADEKVLQAVLDFCCGTGGVNCKELINQG 5
           WCVAKPHADEKVLQAVLDFCCG GGV+C+E+   G
Sbjct: 398 WCVAKPHADEKVLQAVLDFCCGPGGVDCREIYGSG 432


>ref|XP_002272900.1| PREDICTED: glucan endo-1,3-beta-glucosidase 13 [Vitis vinifera]
           gi|147832741|emb|CAN72608.1| hypothetical protein
           VITISV_021340 [Vitis vinifera]
          Length = 460

 Score =  161 bits (408), Expect = 5e-38
 Identities = 72/95 (75%), Positives = 79/95 (83%)
 Frame = -1

Query: 289 FALFNENKKEGSVSERNFGLFNGDGSKVYEVDLTCKFCSNGGEKFGFGEKALGSLRGPSV 110
           FALFNENKK G VSERNFG+ NGDGSKVYE+DL+CKFCS  G   GFGEK   + RGPSV
Sbjct: 313 FALFNENKKGGGVSERNFGILNGDGSKVYEIDLSCKFCSGNGGAVGFGEKVANAARGPSV 372

Query: 109 WCVAKPHADEKVLQAVLDFCCGTGGVNCKELINQG 5
           WCVAKPHADEKVLQAVLDFCCG GGV+C+E+   G
Sbjct: 373 WCVAKPHADEKVLQAVLDFCCGPGGVDCREIYGSG 407


>gb|AFU52645.1| beta-1,3-glucanase 10 [Solanum tuberosum]
          Length = 456

 Score =  149 bits (377), Expect = 2e-34
 Identities = 70/96 (72%), Positives = 82/96 (85%), Gaps = 1/96 (1%)
 Frame = -1

Query: 289 FALFNENKKEGSVSERNFGLFNGDGSKVYEVDLTCKFCSNGGEKFGFG-EKALGSLRGPS 113
           FALFNENKK+G +SERNFG+FNGDG+KVY+VDL+C+FCSN  EKFG   E +L   RGPS
Sbjct: 310 FALFNENKKQGGISERNFGIFNGDGTKVYDVDLSCEFCSN--EKFGGKIESSLLKSRGPS 367

Query: 112 VWCVAKPHADEKVLQAVLDFCCGTGGVNCKELINQG 5
           VWCVAKPHADEKV+QAVLDFCCG GGV+C+E+   G
Sbjct: 368 VWCVAKPHADEKVIQAVLDFCCGPGGVDCREIDENG 403


>ref|XP_002307804.1| predicted protein [Populus trichocarpa] gi|222857253|gb|EEE94800.1|
           predicted protein [Populus trichocarpa]
          Length = 218

 Score =  101 bits (252), Expect = 6e-20
 Identities = 54/95 (56%), Positives = 60/95 (63%)
 Frame = -1

Query: 289 FALFNENKKEGSVSERNFGLFNGDGSKVYEVDLTCKFCSNGGEKFGFGEKALGSLRGPSV 110
           FALFNENKKEG VSER+FG+ NG  S                   GFGEK    + GPSV
Sbjct: 78  FALFNENKKEGGVSERSFGISNGGTS-------------------GFGEKMSSGVSGPSV 118

Query: 109 WCVAKPHADEKVLQAVLDFCCGTGGVNCKELINQG 5
            CVAKPHADEKVLQAVLD  CG GGV+C+E+   G
Sbjct: 119 RCVAKPHADEKVLQAVLDLFCGPGGVDCREIYVSG 153


Top