BLASTX nr result

ID: Coptis24_contig00032446 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032446
         (283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002868477.1| predicted protein [Arabidopsis lyrata subsp....    56   3e-06

>ref|XP_002868477.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297314313|gb|EFH44736.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 57

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 24/30 (80%), Positives = 25/30 (83%)
 Frame = +2

Query: 50  PKDPLTI*VVNRTNHTFTTKLYPLQCNYCI 139
           P DPLTI  +  TNHTFTTKLYPLQCNYCI
Sbjct: 28  PSDPLTIKGIKGTNHTFTTKLYPLQCNYCI 57


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