BLASTX nr result

ID: Coptis24_contig00032443 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032443
         (524 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004136536.1| PREDICTED: ABC transporter G family member 2...   117   1e-24
ref|XP_003553629.1| PREDICTED: ABC transporter G family member 2...   117   1e-24
ref|XP_003521505.1| PREDICTED: ABC transporter G family member 2...   117   1e-24
emb|CBI39105.3| unnamed protein product [Vitis vinifera]              114   9e-24
ref|XP_002322764.1| white-brown-complex ABC transporter family [...   114   9e-24

>ref|XP_004136536.1| PREDICTED: ABC transporter G family member 22-like [Cucumis
           sativus]
          Length = 749

 Score =  117 bits (293), Expect = 1e-24
 Identities = 82/171 (47%), Positives = 100/171 (58%), Gaps = 17/171 (9%)
 Frame = +3

Query: 63  ETPTSGLARTQSDQL---DIAIRKSP-SRTFLNEA--DSG-VSLSRKSSFGK-RMPSPGR 218
           +T + GLART+SDQL     A  KSP S T  N    +SG  +LSRKSS      PSPGR
Sbjct: 3   KTSSLGLARTKSDQLLEKVAAAFKSPMSSTEANGVVGESGSTTLSRKSSKQTLTAPSPGR 62

Query: 219 --------KTHIRKSRSAQLKLDLEEVXXXXXXXXXXXXXXXXXXXXXXXTVPPEDIADL 374
                    THIRKSRSAQLKLDL+++                       T+PP++I D 
Sbjct: 63  GSGSGGGRNTHIRKSRSAQLKLDLDDLGSGAALSRASSASLGLSFSFTGFTLPPDEIGDF 122

Query: 375 HGFSDDDIPEDHEATTCK-RVHSEPTLPIFLKFTEVKYKVVVKSVRTTVEK 524
             FSD+DIPED EA TCK R  +EPT+PI LKF +V YKV++K +RT VEK
Sbjct: 123 KPFSDEDIPEDVEAGTCKTRFQTEPTMPIHLKFKDVTYKVIIKGLRTNVEK 173


>ref|XP_003553629.1| PREDICTED: ABC transporter G family member 22-like [Glycine max]
          Length = 736

 Score =  117 bits (293), Expect = 1e-24
 Identities = 73/156 (46%), Positives = 95/156 (60%), Gaps = 5/156 (3%)
 Frame = +3

Query: 72  TSGLARTQSDQLDIAIRKSPSRTFLNEADSGVSLSRKSSFGKRMPSPG----RKTHIRKS 239
           TS LART+SDQL   +  +  ++    A+ G  LSRKSS+     SPG    R T+IRK+
Sbjct: 6   TSSLARTKSDQLLETVATTAEKS-PPSAEGGGVLSRKSSWRMTASSPGGGGGRNTYIRKA 64

Query: 240 RSAQLKLDLEEVXXXXXXXXXXXXXXXXXXXXXXXTVPPEDIADLHGFSDDDIPEDHEAT 419
           RSAQLK++++EV                       T+PP++IAD   FSDDDIPED EA 
Sbjct: 65  RSAQLKVEVDEVGSGVALSRASSASLGLSFSFTGFTLPPDEIADSKPFSDDDIPEDIEAG 124

Query: 420 TCK-RVHSEPTLPIFLKFTEVKYKVVVKSVRTTVEK 524
           T K +  +EPTLPI+LKFT+V YKVV+K + TT EK
Sbjct: 125 TPKPKFQTEPTLPIYLKFTDVTYKVVMKGITTTKEK 160


>ref|XP_003521505.1| PREDICTED: ABC transporter G family member 22-like [Glycine max]
          Length = 740

 Score =  117 bits (292), Expect = 1e-24
 Identities = 72/158 (45%), Positives = 96/158 (60%), Gaps = 7/158 (4%)
 Frame = +3

Query: 72  TSGLARTQSDQLDIAIRKSPSRTFLNEADSGVSLSRKSSFGKRM-PSPG-----RKTHIR 233
           +S LART+SDQL +    + +      A+ G +LSRKSS+     PSPG     R T+IR
Sbjct: 7   SSSLARTKSDQLAVETVATTAEKSPPSAEGGGALSRKSSWRMTAAPSPGGGGGGRNTYIR 66

Query: 234 KSRSAQLKLDLEEVXXXXXXXXXXXXXXXXXXXXXXXTVPPEDIADLHGFSDDDIPEDHE 413
           K+RSAQLK++++EV                       T+PP++IAD   FSDDDIPED E
Sbjct: 67  KARSAQLKVEVDEVGSGVALSRASSASLGLSFSFTGFTLPPDEIADSKPFSDDDIPEDIE 126

Query: 414 ATTCK-RVHSEPTLPIFLKFTEVKYKVVVKSVRTTVEK 524
           A T K +  +EPTLPI+LKFT+V YK+V+K + TT EK
Sbjct: 127 AGTPKPKFQTEPTLPIYLKFTDVTYKLVMKGITTTKEK 164


>emb|CBI39105.3| unnamed protein product [Vitis vinifera]
          Length = 738

 Score =  114 bits (285), Expect = 9e-24
 Identities = 75/161 (46%), Positives = 92/161 (57%), Gaps = 15/161 (9%)
 Frame = +3

Query: 87  RTQSDQL-------DIAIRKSPSRTFLNEADSGVSLSRKSSFGKRMP-SPGR------KT 224
           RT+SDQL         A+R   S      A+SG +LSRKSS    M  SPGR       T
Sbjct: 2   RTKSDQLVETAEAVAAAMRSPTSGEATGGAESGGTLSRKSSRRSMMSASPGRAGGNSKNT 61

Query: 225 HIRKSRSAQLKLDLEEVXXXXXXXXXXXXXXXXXXXXXXXTVPPEDIADLHGFSDDDIPE 404
           HIRKSRSAQ+KLDL+EV                       TVPP++I+D   FSDDD P+
Sbjct: 62  HIRKSRSAQIKLDLDEVSSGAALSRASSASLGFSFSFTGFTVPPDEISDFKPFSDDDTPD 121

Query: 405 DHEATTCK-RVHSEPTLPIFLKFTEVKYKVVVKSVRTTVEK 524
           D EA   K R+ +EPTLPI+LKF +V YKV++K +RT VEK
Sbjct: 122 DLEAGMRKQRIQAEPTLPIYLKFKDVTYKVILKGMRTNVEK 162


>ref|XP_002322764.1| white-brown-complex ABC transporter family [Populus trichocarpa]
           gi|222867394|gb|EEF04525.1| white-brown-complex ABC
           transporter family [Populus trichocarpa]
          Length = 744

 Score =  114 bits (285), Expect = 9e-24
 Identities = 76/170 (44%), Positives = 98/170 (57%), Gaps = 15/170 (8%)
 Frame = +3

Query: 60  METPTSGLARTQSDQLDIAIR---KSPSRTF---LNEADSGVSLSRKSSFGKRMP-SPGR 218
           ME   + LART+S+QL   +    KSPS      +++  SG +LSRKSS    M  SPGR
Sbjct: 1   MEKENTSLARTRSEQLVETVAAAFKSPSNNEAIGVSDGSSGGTLSRKSSKRLMMAASPGR 60

Query: 219 KT-------HIRKSRSAQLKLDLEEVXXXXXXXXXXXXXXXXXXXXXXXTVPPEDIADLH 377
            T       HIRKSRSAQ+K DL++V                        +PP++IAD  
Sbjct: 61  STSGGNKNTHIRKSRSAQMKFDLDDVSSGAALSRASSASLGFSFSFTGFNMPPDEIADSK 120

Query: 378 GFSDDDIPEDHEATTCK-RVHSEPTLPIFLKFTEVKYKVVVKSVRTTVEK 524
            FSDDDIPED EA T K +  +EPTLPI+LKFT+V YKV++K + +T EK
Sbjct: 121 PFSDDDIPEDLEAGTRKPKFQTEPTLPIYLKFTDVTYKVIIKGMTSTEEK 170


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