BLASTX nr result
ID: Coptis24_contig00032421
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00032421
(324 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japo... 87 1e-15
gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indi... 87 1e-15
ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group] g... 87 1e-15
ref|XP_003629614.1| Pentatricopeptide repeat-containing protein ... 87 2e-15
ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Sela... 84 1e-14
>gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
Length = 799
Score = 87.4 bits (215), Expect = 1e-15
Identities = 47/107 (43%), Positives = 67/107 (62%), Gaps = 1/107 (0%)
Frame = +1
Query: 1 GLCKVGRVVAAHKIIGDMQAHGQSSNVIT*NVLIDGLCANGCLSQAMKIFHMMEKNGLKA 180
GLCK G V AA++++ +M + G N+ T N LI+GLC G L QAM+ M++ GLK
Sbjct: 469 GLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKP 528
Query: 181 DVVIYSTVIKKLCTAEKLDEARSSSVAFLPK-MQPNTITYTTLINGF 318
DV Y+T+I LC +++LD A S L K ++P +TY L+NGF
Sbjct: 529 DVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGF 575
Score = 67.4 bits (163), Expect = 1e-09
Identities = 38/109 (34%), Positives = 56/109 (51%), Gaps = 1/109 (0%)
Frame = +1
Query: 1 GLCKVGRVVAAHKIIGDMQAHGQSSNVIT*NVLIDGLCANGCLSQAMKIFHMMEKNGLKA 180
G C+ G + AA +MQ G +++ +T LI+GLC G L +A ++ ME GL
Sbjct: 364 GFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDV 423
Query: 181 DVVIYSTVIKKLCTAEKLDEARSSSVAFLPK-MQPNTITYTTLINGFGK 324
D V Y+ +I C K+ EA + K + PN +TYT L +G K
Sbjct: 424 DAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCK 472
Score = 63.5 bits (153), Expect = 2e-08
Identities = 38/108 (35%), Positives = 55/108 (50%), Gaps = 1/108 (0%)
Frame = +1
Query: 4 LCKVGRVVAAHKIIGDMQAHGQSSNVIT*NVLIDGLCANGCLSQAMKIFHMMEKNGLKAD 183
LC G+V A +++ DM HG + ++ G C G L+ A F M+K GL AD
Sbjct: 330 LCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAAD 389
Query: 184 VVIYSTVIKKLCTAEKLDEARSSSVAFLPK-MQPNTITYTTLINGFGK 324
V Y+ +I LC A +L EA K + + +TYT LI+G+ K
Sbjct: 390 GVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCK 437
Score = 55.8 bits (133), Expect = 3e-06
Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 1/109 (0%)
Frame = +1
Query: 1 GLCKVGRVVAAHKIIGDMQAHGQSSNVIT*NVLIDGLCANGCLSQAMKIFHMMEKNGLKA 180
GLC+ G + A +++ +M+ G + +T VLIDG C G +++A + + M + +
Sbjct: 399 GLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTP 458
Query: 181 DVVIYSTVIKKLCTAEKLDEARSSSVAFLPK-MQPNTITYTTLINGFGK 324
+VV Y+ + LC + A K ++ N TY +LING K
Sbjct: 459 NVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCK 507
>gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
Length = 799
Score = 87.4 bits (215), Expect = 1e-15
Identities = 47/107 (43%), Positives = 67/107 (62%), Gaps = 1/107 (0%)
Frame = +1
Query: 1 GLCKVGRVVAAHKIIGDMQAHGQSSNVIT*NVLIDGLCANGCLSQAMKIFHMMEKNGLKA 180
GLCK G V AA++++ +M + G N+ T N LI+GLC G L QAM+ M++ GLK
Sbjct: 469 GLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKP 528
Query: 181 DVVIYSTVIKKLCTAEKLDEARSSSVAFLPK-MQPNTITYTTLINGF 318
DV Y+T+I LC +++LD A S L K ++P +TY L+NGF
Sbjct: 529 DVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGF 575
Score = 67.4 bits (163), Expect = 1e-09
Identities = 38/109 (34%), Positives = 56/109 (51%), Gaps = 1/109 (0%)
Frame = +1
Query: 1 GLCKVGRVVAAHKIIGDMQAHGQSSNVIT*NVLIDGLCANGCLSQAMKIFHMMEKNGLKA 180
G C+ G + AA +MQ G +++ +T LI+GLC G L +A ++ ME GL
Sbjct: 364 GFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDV 423
Query: 181 DVVIYSTVIKKLCTAEKLDEARSSSVAFLPK-MQPNTITYTTLINGFGK 324
D V Y+ +I C K+ EA + K + PN +TYT L +G K
Sbjct: 424 DAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCK 472
Score = 63.5 bits (153), Expect = 2e-08
Identities = 38/108 (35%), Positives = 55/108 (50%), Gaps = 1/108 (0%)
Frame = +1
Query: 4 LCKVGRVVAAHKIIGDMQAHGQSSNVIT*NVLIDGLCANGCLSQAMKIFHMMEKNGLKAD 183
LC G+V A +++ DM HG + ++ G C G L+ A F M+K GL AD
Sbjct: 330 LCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAAD 389
Query: 184 VVIYSTVIKKLCTAEKLDEARSSSVAFLPK-MQPNTITYTTLINGFGK 324
V Y+ +I LC A +L EA K + + +TYT LI+G+ K
Sbjct: 390 GVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCK 437
Score = 55.8 bits (133), Expect = 3e-06
Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 1/109 (0%)
Frame = +1
Query: 1 GLCKVGRVVAAHKIIGDMQAHGQSSNVIT*NVLIDGLCANGCLSQAMKIFHMMEKNGLKA 180
GLC+ G + A +++ +M+ G + +T VLIDG C G +++A + + M + +
Sbjct: 399 GLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTP 458
Query: 181 DVVIYSTVIKKLCTAEKLDEARSSSVAFLPK-MQPNTITYTTLINGFGK 324
+VV Y+ + LC + A K ++ N TY +LING K
Sbjct: 459 NVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCK 507
>ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza
sativa Japonica Group] gi|50509504|dbj|BAD31185.1|
putative CRP1 protein [Oryza sativa Japonica Group]
gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa
Japonica Group] gi|215715304|dbj|BAG95055.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 754
Score = 87.4 bits (215), Expect = 1e-15
Identities = 47/107 (43%), Positives = 67/107 (62%), Gaps = 1/107 (0%)
Frame = +1
Query: 1 GLCKVGRVVAAHKIIGDMQAHGQSSNVIT*NVLIDGLCANGCLSQAMKIFHMMEKNGLKA 180
GLCK G V AA++++ +M + G N+ T N LI+GLC G L QAM+ M++ GLK
Sbjct: 469 GLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKP 528
Query: 181 DVVIYSTVIKKLCTAEKLDEARSSSVAFLPK-MQPNTITYTTLINGF 318
DV Y+T+I LC +++LD A S L K ++P +TY L+NGF
Sbjct: 529 DVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGF 575
Score = 67.4 bits (163), Expect = 1e-09
Identities = 38/109 (34%), Positives = 56/109 (51%), Gaps = 1/109 (0%)
Frame = +1
Query: 1 GLCKVGRVVAAHKIIGDMQAHGQSSNVIT*NVLIDGLCANGCLSQAMKIFHMMEKNGLKA 180
G C+ G + AA +MQ G +++ +T LI+GLC G L +A ++ ME GL
Sbjct: 364 GFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDV 423
Query: 181 DVVIYSTVIKKLCTAEKLDEARSSSVAFLPK-MQPNTITYTTLINGFGK 324
D V Y+ +I C K+ EA + K + PN +TYT L +G K
Sbjct: 424 DAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCK 472
Score = 63.5 bits (153), Expect = 2e-08
Identities = 38/108 (35%), Positives = 55/108 (50%), Gaps = 1/108 (0%)
Frame = +1
Query: 4 LCKVGRVVAAHKIIGDMQAHGQSSNVIT*NVLIDGLCANGCLSQAMKIFHMMEKNGLKAD 183
LC G+V A +++ DM HG + ++ G C G L+ A F M+K GL AD
Sbjct: 330 LCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAAD 389
Query: 184 VVIYSTVIKKLCTAEKLDEARSSSVAFLPK-MQPNTITYTTLINGFGK 324
V Y+ +I LC A +L EA K + + +TYT LI+G+ K
Sbjct: 390 GVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCK 437
Score = 55.8 bits (133), Expect = 3e-06
Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 1/109 (0%)
Frame = +1
Query: 1 GLCKVGRVVAAHKIIGDMQAHGQSSNVIT*NVLIDGLCANGCLSQAMKIFHMMEKNGLKA 180
GLC+ G + A +++ +M+ G + +T VLIDG C G +++A + + M + +
Sbjct: 399 GLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTP 458
Query: 181 DVVIYSTVIKKLCTAEKLDEARSSSVAFLPK-MQPNTITYTTLINGFGK 324
+VV Y+ + LC + A K ++ N TY +LING K
Sbjct: 459 NVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCK 507
>ref|XP_003629614.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523636|gb|AET04090.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 592
Score = 86.7 bits (213), Expect = 2e-15
Identities = 44/109 (40%), Positives = 68/109 (62%), Gaps = 1/109 (0%)
Frame = +1
Query: 1 GLCKVGRVVAAHKIIGDMQAHGQSSNVIT*NVLIDGLCANGCLSQAMKIFHMMEKNGLKA 180
G C+VGR +AA ++ +M +GQ N+ T +++DGLC + LS+A+ +FH MEK+ L
Sbjct: 400 GFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDL 459
Query: 181 DVVIYSTVIKKLCTAEKLDEARSSSVAFLPK-MQPNTITYTTLINGFGK 324
++VIYS ++ +C+A KL+ A K +Q N YT +INGF K
Sbjct: 460 NIVIYSIILDGMCSAGKLNTALELFSCLPAKGLQINVYAYTIMINGFAK 508
Score = 65.1 bits (157), Expect = 6e-09
Identities = 37/112 (33%), Positives = 60/112 (53%), Gaps = 5/112 (4%)
Frame = +1
Query: 4 LCKVGRVVAAHKIIGDMQAHGQSSNVIT*NVLIDGLCANGCLSQAMKIFHMMEKNGLKAD 183
LC + V ++G M G +V+T +LI+GLC G + +A+++ +EK G ++D
Sbjct: 121 LCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVELVDHVEKTGYRSD 180
Query: 184 VVIYSTVIKKLCTAEKLDEARSSSVAFLPKMQ-----PNTITYTTLINGFGK 324
V Y +I LC K EA V +L KM+ PN + Y+T+++G K
Sbjct: 181 VKTYGVLINGLCKMGKTSEA----VGWLRKMEERNWNPNVVVYSTVMDGLCK 228
Score = 64.7 bits (156), Expect = 8e-09
Identities = 40/106 (37%), Positives = 58/106 (54%), Gaps = 1/106 (0%)
Frame = +1
Query: 1 GLCKVGRVVAAHKIIGDMQAHGQSSNVIT*NVLIDGLCANGCLSQAMKIFHMMEKNGLKA 180
GLC G V A +++ ++ G S+V T VLI+GLC G S+A+ ME+
Sbjct: 155 GLCVKGDVGRAVELVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNP 214
Query: 181 DVVIYSTVIKKLCTAEKLDEARSSSVAFLPK-MQPNTITYTTLING 315
+VV+YSTV+ LC + EA + K ++PN +TYT LI G
Sbjct: 215 NVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQG 260
Score = 64.3 bits (155), Expect = 1e-08
Identities = 34/106 (32%), Positives = 57/106 (53%), Gaps = 1/106 (0%)
Frame = +1
Query: 4 LCKVGRVVAAHKIIGDMQAHGQSSNVIT*NVLIDGLCANGCLSQAMKIFHMMEKNGLKAD 183
LCK G+++ A +IG M G+ +V T N LID C + +A ++F +M G D
Sbjct: 296 LCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPD 355
Query: 184 VVIYSTVIKKLCTAEKLDEARSSSVAFLP-KMQPNTITYTTLINGF 318
+V Y+++I C + +++A + P+ +T+TTLI GF
Sbjct: 356 IVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGF 401
Score = 57.8 bits (138), Expect = 9e-07
Identities = 34/109 (31%), Positives = 56/109 (51%), Gaps = 1/109 (0%)
Frame = +1
Query: 1 GLCKVGRVVAAHKIIGDMQAHGQSSNVIT*NVLIDGLCANGCLSQAMKIFHMMEKNGLKA 180
GLC GR A ++ +M G ++ + N+L+D LC G + QA + M G
Sbjct: 260 GLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVP 319
Query: 181 DVVIYSTVIKKLCTAEKLDEA-RSSSVAFLPKMQPNTITYTTLINGFGK 324
DV Y+++I + C ++DEA R + P+ + YT+LI+G+ K
Sbjct: 320 DVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCK 368
>ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
gi|300141349|gb|EFJ08061.1| hypothetical protein
SELMODRAFT_132337 [Selaginella moellendorffii]
Length = 624
Score = 84.0 bits (206), Expect = 1e-14
Identities = 46/110 (41%), Positives = 66/110 (60%), Gaps = 2/110 (1%)
Frame = +1
Query: 1 GLCKVGRVVAAHKIIGDMQAHGQSSNVIT*NVLIDGLCANGCLSQAMKIFHMMEKNGLKA 180
GLCK GR A K++ +M+ G S N+ T NV+++GLC L +A K+ M G
Sbjct: 89 GLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFP 148
Query: 181 DVVIYSTVIKKLCTAEKLDEARSSSVAFLPKM--QPNTITYTTLINGFGK 324
DVV Y++ IK LC +++DEAR FL +M P+ ++YTT+ING K
Sbjct: 149 DVVTYNSFIKGLCKCDRVDEARK----FLARMPVTPDVVSYTTVINGLCK 194