BLASTX nr result
ID: Coptis24_contig00032404
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00032404
(574 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002311419.1| predicted protein [Populus trichocarpa] gi|2... 227 1e-57
ref|XP_002315995.1| predicted protein [Populus trichocarpa] gi|2... 225 5e-57
ref|XP_002267498.2| PREDICTED: putative U-box domain-containing ... 220 1e-55
ref|NP_177060.3| putative U-box domain-containing protein 42 [Ar... 188 5e-46
ref|XP_002888693.1| hypothetical protein ARALYDRAFT_339138 [Arab... 188 5e-46
>ref|XP_002311419.1| predicted protein [Populus trichocarpa] gi|222851239|gb|EEE88786.1|
predicted protein [Populus trichocarpa]
Length = 949
Score = 227 bits (578), Expect = 1e-57
Identities = 112/186 (60%), Positives = 135/186 (72%)
Frame = +1
Query: 1 ENLSAVSINLSKPPEXXXXXXXXXXXXXXXXSTKSSKNKKLALCPIHRGVCSSQSTFCLL 180
ENLS SINLSKPP+ S+ SSK ++L LCP+HRG CSSQ+TFCL+
Sbjct: 757 ENLSLESINLSKPPQIKKTKFLKLFYPPKFLSSISSKKRQLPLCPVHRGACSSQNTFCLV 816
Query: 181 DANAVERLLACLDHENVQVVEAALSAICTLXXXXXXXXXXXXXXXXXXAIQHVLNVLREH 360
DA AVERLLACLDHENV+VVEAALSA+CTL AIQ VLN ++EH
Sbjct: 817 DAKAVERLLACLDHENVEVVEAALSAVCTLLDDEVDVEMSVGMLCEVNAIQLVLNAVKEH 876
Query: 361 REESLWQKSFWVIEKFLLKGGDSSASDISQDRFLPATLITAFHHGDVNTRQNAEKILRHL 540
+ E LW+KSFW+I++FL+KGG ASDISQDR LPATL+ AFHHGD++TRQ AE+ILRHL
Sbjct: 877 KGEGLWKKSFWLIDRFLVKGGSRCASDISQDRLLPATLVNAFHHGDIDTRQMAERILRHL 936
Query: 541 NKIPDF 558
NK+P+F
Sbjct: 937 NKMPNF 942
>ref|XP_002315995.1| predicted protein [Populus trichocarpa] gi|222865035|gb|EEF02166.1|
predicted protein [Populus trichocarpa]
Length = 935
Score = 225 bits (573), Expect = 5e-57
Identities = 114/186 (61%), Positives = 134/186 (72%)
Frame = +1
Query: 1 ENLSAVSINLSKPPEXXXXXXXXXXXXXXXXSTKSSKNKKLALCPIHRGVCSSQSTFCLL 180
ENLS SI+LSKPP + SSK +KL +CP+HRG CSSQ+TFCL+
Sbjct: 743 ENLSLESISLSKPPVIKKTKFLKLFYPPKFLFSGSSKKRKLPVCPVHRGACSSQNTFCLV 802
Query: 181 DANAVERLLACLDHENVQVVEAALSAICTLXXXXXXXXXXXXXXXXXXAIQHVLNVLREH 360
DA AVERLLACLDHENV+VVEAALSAICTL A QHVLNV++EH
Sbjct: 803 DAKAVERLLACLDHENVEVVEAALSAICTLLDDKVDVDKSVGMLCEVNATQHVLNVVKEH 862
Query: 361 REESLWQKSFWVIEKFLLKGGDSSASDISQDRFLPATLITAFHHGDVNTRQNAEKILRHL 540
+ E L +KSFW+I++FLLKGG ASDISQDR LPATL++AFHHGD++TRQ AEKILRHL
Sbjct: 863 KGEGLRKKSFWLIDRFLLKGGKRPASDISQDRLLPATLVSAFHHGDIDTRQMAEKILRHL 922
Query: 541 NKIPDF 558
NK+PDF
Sbjct: 923 NKMPDF 928
>ref|XP_002267498.2| PREDICTED: putative U-box domain-containing protein 42-like [Vitis
vinifera]
Length = 1055
Score = 220 bits (560), Expect = 1e-55
Identities = 109/190 (57%), Positives = 135/190 (71%)
Frame = +1
Query: 1 ENLSAVSINLSKPPEXXXXXXXXXXXXXXXXSTKSSKNKKLALCPIHRGVCSSQSTFCLL 180
+NLS+ S+NLSKPP+ S SSK+KK+ +CP+HRG CSSQ+TFCL+
Sbjct: 864 KNLSSESVNLSKPPQIKRTKFLKFFKLPRSLSAGSSKSKKIQVCPVHRGACSSQNTFCLV 923
Query: 181 DANAVERLLACLDHENVQVVEAALSAICTLXXXXXXXXXXXXXXXXXXAIQHVLNVLREH 360
DA AVERLLACL+HEN +V+EAALSA+CTL IQHVLNV++EH
Sbjct: 924 DAKAVERLLACLEHENAEVIEAALSALCTLLDDKVDVDKSVSLLSGVDCIQHVLNVVKEH 983
Query: 361 REESLWQKSFWVIEKFLLKGGDSSASDISQDRFLPATLITAFHHGDVNTRQNAEKILRHL 540
REE L +KS WVIE+FL+KGGD SAS ISQDR LPATL++AFHHGD +T+Q A KILRHL
Sbjct: 984 REEGLREKSLWVIERFLMKGGDRSASYISQDRSLPATLVSAFHHGDGSTKQMAAKILRHL 1043
Query: 541 NKIPDFSAKF 570
N++P + F
Sbjct: 1044 NQMPKVTTNF 1053
>ref|NP_177060.3| putative U-box domain-containing protein 42 [Arabidopsis thaliana]
gi|75333632|sp|Q9CAA7.1|PUB42_ARATH RecName:
Full=Putative U-box domain-containing protein 42;
AltName: Full=Plant U-box protein 42
gi|12323215|gb|AAG51587.1|AC011665_8 hypothetical protein
[Arabidopsis thaliana] gi|332196744|gb|AEE34865.1|
putative U-box domain-containing protein 42 [Arabidopsis
thaliana]
Length = 1033
Score = 188 bits (478), Expect = 5e-46
Identities = 91/187 (48%), Positives = 128/187 (68%)
Frame = +1
Query: 1 ENLSAVSINLSKPPEXXXXXXXXXXXXXXXXSTKSSKNKKLALCPIHRGVCSSQSTFCLL 180
ENLS+ ++ LS+PP+ S +SSK K++ +C IHRGVCS+++TFCL+
Sbjct: 843 ENLSSTTMTLSRPPQPRSTKFMGSLSMPRSFSLRSSKKKQIEICAIHRGVCSAKNTFCLV 902
Query: 181 DANAVERLLACLDHENVQVVEAALSAICTLXXXXXXXXXXXXXXXXXXAIQHVLNVLREH 360
+ANA+ +LLACL + V+VVE+AL+AICTL A+Q +LN ++EH
Sbjct: 903 EANAITKLLACLQSDKVEVVESALAAICTLLDDKVEVEKSLSMLSEMNAVQLILNAVKEH 962
Query: 361 REESLWQKSFWVIEKFLLKGGDSSASDISQDRFLPATLITAFHHGDVNTRQNAEKILRHL 540
++ESL QK+FW+I+KF+++GGD AS+ISQDR L L++AFH GD NTRQ AE ILR L
Sbjct: 963 KKESLLQKAFWMIDKFIIRGGDKYASEISQDRMLSGMLVSAFHRGDGNTRQMAENILRRL 1022
Query: 541 NKIPDFS 561
+K+P FS
Sbjct: 1023 DKMPSFS 1029
>ref|XP_002888693.1| hypothetical protein ARALYDRAFT_339138 [Arabidopsis lyrata subsp.
lyrata] gi|297334534|gb|EFH64952.1| hypothetical protein
ARALYDRAFT_339138 [Arabidopsis lyrata subsp. lyrata]
Length = 1032
Score = 188 bits (478), Expect = 5e-46
Identities = 91/187 (48%), Positives = 128/187 (68%)
Frame = +1
Query: 1 ENLSAVSINLSKPPEXXXXXXXXXXXXXXXXSTKSSKNKKLALCPIHRGVCSSQSTFCLL 180
ENLS+ ++ LS+PP+ S +SSK K++ +C IHRGVCS+++TFCL+
Sbjct: 842 ENLSSTTMTLSRPPQPRSTKFMGSLSMPRSFSLRSSKKKQIEICAIHRGVCSAKNTFCLV 901
Query: 181 DANAVERLLACLDHENVQVVEAALSAICTLXXXXXXXXXXXXXXXXXXAIQHVLNVLREH 360
+ANA+ +LLACL + V+VVE+AL+AICTL A+Q +LN ++EH
Sbjct: 902 EANAITKLLACLQSDKVEVVESALAAICTLLDDKVDVEKSLSMLSEMNAVQLILNAVKEH 961
Query: 361 REESLWQKSFWVIEKFLLKGGDSSASDISQDRFLPATLITAFHHGDVNTRQNAEKILRHL 540
++ESL QK+FW+I+KF+++GGD AS+ISQDR L L++AFH GD NTRQ AE ILR L
Sbjct: 962 KKESLLQKAFWMIDKFIIRGGDKYASEISQDRMLSGMLVSAFHRGDGNTRQMAENILRRL 1021
Query: 541 NKIPDFS 561
+K+P FS
Sbjct: 1022 DKMPSFS 1028