BLASTX nr result

ID: Coptis24_contig00032403 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032403
         (394 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299134.1| DNA methyltransferase [Populus trichocarpa] ...   150   1e-34
ref|XP_002283355.2| PREDICTED: DNA (cytosine-5)-methyltransferas...   149   2e-34
ref|XP_002530367.1| protein with unknown function [Ricinus commu...   143   1e-32
ref|XP_003517640.1| PREDICTED: DNA (cytosine-5)-methyltransferas...   142   3e-32
emb|CBI29991.3| unnamed protein product [Vitis vinifera]              141   5e-32

>ref|XP_002299134.1| DNA methyltransferase [Populus trichocarpa]
           gi|222846392|gb|EEE83939.1| DNA methyltransferase
           [Populus trichocarpa]
          Length = 973

 Score =  150 bits (379), Expect = 1e-34
 Identities = 71/120 (59%), Positives = 89/120 (74%)
 Frame = -1

Query: 391 ETSETKFNSEKYFLGGHHEKSETTLLDLYSGCGAMSTGLCLGASFSGVNLVTRWAVDFNE 212
           + +  KF  ++        KSE  LLDLYSGCGAMSTGLCLGA+ SG+NLVT+WAVD N+
Sbjct: 378 DAAGVKFECDEVCESSGRRKSEVALLDLYSGCGAMSTGLCLGANLSGLNLVTKWAVDLNK 437

Query: 211 YACESLRLNHPETQVRNETAENFLSLLKEWRKLCEKFNLLGCERSQRQEVLLIPNDGDDD 32
           +ACESLRLNHPETQVRNETAE+FL LLKEW KLC +F+L+  +  ++Q+      D +DD
Sbjct: 438 HACESLRLNHPETQVRNETAEDFLMLLKEWEKLCIRFSLVKNDDPEKQQTYSFDMDDEDD 497


>ref|XP_002283355.2| PREDICTED: DNA (cytosine-5)-methyltransferase CMT3-like [Vitis
           vinifera]
          Length = 956

 Score =  149 bits (376), Expect = 2e-34
 Identities = 70/102 (68%), Positives = 82/102 (80%)
 Frame = -1

Query: 394 GETSETKFNSEKYFLGGHHEKSETTLLDLYSGCGAMSTGLCLGASFSGVNLVTRWAVDFN 215
           G T E K +SE+         SE TLLDLYSGCGAMS+GLCLGA  SGVNLVTRWA+D N
Sbjct: 364 GSTCELKSDSEEVSQARERSLSEMTLLDLYSGCGAMSSGLCLGAKMSGVNLVTRWAIDIN 423

Query: 214 EYACESLRLNHPETQVRNETAENFLSLLKEWRKLCEKFNLLG 89
            YACES+RLNHPETQVRNE+AE+FL+LL+EW KLC +F+L+G
Sbjct: 424 AYACESVRLNHPETQVRNESAEDFLALLREWEKLCVRFSLIG 465


>ref|XP_002530367.1| protein with unknown function [Ricinus communis]
           gi|223530114|gb|EEF32028.1| protein with unknown
           function [Ricinus communis]
          Length = 845

 Score =  143 bits (361), Expect = 1e-32
 Identities = 67/102 (65%), Positives = 80/102 (78%)
 Frame = -1

Query: 337 EKSETTLLDLYSGCGAMSTGLCLGASFSGVNLVTRWAVDFNEYACESLRLNHPETQVRNE 158
           EKSE  LLDLYSGCGAMSTGLC+GAS SGV LVT+WAVD N +AC+SL+ NHPET+VRNE
Sbjct: 271 EKSELYLLDLYSGCGAMSTGLCMGASLSGVKLVTKWAVDINAFACKSLKTNHPETEVRNE 330

Query: 157 TAENFLSLLKEWRKLCEKFNLLGCERSQRQEVLLIPNDGDDD 32
            AE+FLSLLKEW KLC KF+L G E+   Q      ++ ++D
Sbjct: 331 AAEDFLSLLKEWEKLCRKFSLFGSEKHPEQSSNSASDEEEED 372


>ref|XP_003517640.1| PREDICTED: DNA (cytosine-5)-methyltransferase CMT3-like [Glycine
           max]
          Length = 868

 Score =  142 bits (358), Expect = 3e-32
 Identities = 70/126 (55%), Positives = 88/126 (69%)
 Frame = -1

Query: 382 ETKFNSEKYFLGGHHEKSETTLLDLYSGCGAMSTGLCLGASFSGVNLVTRWAVDFNEYAC 203
           E     ++ FL    +  E  LLDLY GCGAMSTGLCLG + SGVNLVTRWAVD N++AC
Sbjct: 276 EVNSQPKEAFLPEESKDPEMKLLDLYCGCGAMSTGLCLGGNLSGVNLVTRWAVDLNQHAC 335

Query: 202 ESLRLNHPETQVRNETAENFLSLLKEWRKLCEKFNLLGCERSQRQEVLLIPNDGDDDTAP 23
           E L+LNHPET+VRNE+AENFLSLLKEW++LC  F+L+  + S  + V L   D DD ++ 
Sbjct: 336 ECLKLNHPETEVRNESAENFLSLLKEWQELCSYFSLVEKKVSHEKYVNLFSEDDDDTSSN 395

Query: 22  ANPSKE 5
              + E
Sbjct: 396 EEVNSE 401


>emb|CBI29991.3| unnamed protein product [Vitis vinifera]
          Length = 827

 Score =  141 bits (356), Expect = 5e-32
 Identities = 73/107 (68%), Positives = 83/107 (77%), Gaps = 2/107 (1%)
 Frame = -1

Query: 331 SETTLLDLYSGCGAMSTGLCLGASFSGVNLVTRWAVDFNEYACESLRLNHPETQVRNETA 152
           S  TLLDLYSGCGAMSTGLCLGAS SG+ LVTRWAVD N +ACESL+LNHPET+VRNE A
Sbjct: 250 SGMTLLDLYSGCGAMSTGLCLGASLSGLKLVTRWAVDINPHACESLKLNHPETEVRNEAA 309

Query: 151 ENFLSLLKEWRKLCEKFNLLGCERSQRQEVL--LIPNDGDDDTAPAN 17
           E+FLSLLKEW  LCE F+LLG   S+R EV+  +    G DD   A+
Sbjct: 310 EDFLSLLKEWATLCEDFSLLG---SRRPEVVNPISNRSGSDDEEDAD 353


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