BLASTX nr result
ID: Coptis24_contig00032393
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00032393 (495 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|BAB03186.1| En/Spm transposon protein-like [Arabidopsis thal... 74 1e-11 ref|XP_004134263.1| PREDICTED: uncharacterized protein LOC101217... 72 6e-11 gb|AAG50653.1|AC073433_5 hypothetical protein [Arabidopsis thali... 70 2e-10 gb|AAF88020.1| contains similarity to other Arabidopsis thaliana... 64 2e-08 gb|AAG60150.1|AC074360_15 En/Spm-like transposon protein, putati... 63 2e-08 >dbj|BAB03186.1| En/Spm transposon protein-like [Arabidopsis thaliana] Length = 1516 Score = 73.9 bits (180), Expect = 1e-11 Identities = 52/174 (29%), Positives = 80/174 (45%), Gaps = 9/174 (5%) Frame = +1 Query: 1 RKGYARLEAEMKNQSANPSSVSRTDVWEKAHTRKDGQPANAEVAEKMKKIQELKASTPNS 180 RKG L EMK +S+NP V+R+ VW HT DG+P E AE ++KI+ + + +S Sbjct: 1078 RKGMISLAHEMKKKSSNPKLVTRSKVWIAGHTHSDGRPVKPEFAETIEKIKSIDSEMDSS 1137 Query: 181 S--SLKDDALSQVLGPEXXXXXXXXXXXXTPSKLGLAPKSNEKVDXXXXXXXXXXXXXXX 354 S LK+DA+SQVLG + T +KL + V+ Sbjct: 1138 SFTDLKEDAVSQVLGKDKPGRLRGMGRGVTATKLAFMLARDSHVE--------------K 1183 Query: 355 MERLQQETQDQLKAMQILVNQLV-------QTQAQYGSNKPEGVKCKLFRMVKE 495 +E Q + +L+ +Q +V+ L + SN GV+C+L K+ Sbjct: 1184 LEATQADLLTKLEDLQNVVHGLAAKKEHVEEVSRSEASNVSAGVRCQLLDWCKD 1237 >ref|XP_004134263.1| PREDICTED: uncharacterized protein LOC101217008 [Cucumis sativus] Length = 1163 Score = 71.6 bits (174), Expect = 6e-11 Identities = 35/77 (45%), Positives = 54/77 (70%), Gaps = 2/77 (2%) Frame = +1 Query: 1 RKGYARLEAEMKNQSANPSSVSRTDVWEKAHTRKDGQPANAEVAEKMKKIQEL--KASTP 174 RKGYARL EMK + SSVSR VW KAH +KDG P N++VAE +++I+++ + Sbjct: 860 RKGYARLAEEMKKGCPDSSSVSRVAVWAKAHRKKDGNPVNSQVAEALERIEQIDNEGIKT 919 Query: 175 NSSSLKDDALSQVLGPE 225 S+++ ++A+S+VLG + Sbjct: 920 TSNNVGNEAISKVLGSD 936 >gb|AAG50653.1|AC073433_5 hypothetical protein [Arabidopsis thaliana] Length = 623 Score = 70.1 bits (170), Expect = 2e-10 Identities = 36/76 (47%), Positives = 49/76 (64%), Gaps = 1/76 (1%) Frame = +1 Query: 1 RKGYARLEAEMKNQSANPSSVSRTDVWEKAHTRKDGQPANAEVAEKMKKIQELKASTPNS 180 R+G RL MK +S NPS VSR VW K+ TRKDG P N EK+ + +K+ TP+S Sbjct: 250 RRGMVRLAEHMKKESPNPSEVSRLQVWIKSRTRKDGTPVNTNTGEKIAS-EIVKSDTPSS 308 Query: 181 SSLK-DDALSQVLGPE 225 + + D+LSQ+LGP+ Sbjct: 309 ACFEGQDSLSQLLGPD 324 >gb|AAF88020.1| contains similarity to other Arabidopsis thaliana putative transposon proteins [Arabidopsis thaliana] Length = 782 Score = 63.5 bits (153), Expect = 2e-08 Identities = 31/66 (46%), Positives = 44/66 (66%), Gaps = 2/66 (3%) Frame = +1 Query: 34 KNQSANPSSVSRTDVWEKAHTRKDGQPANAEVAEKMKKIQELKASTPNSSSLKD--DALS 207 K SA+P+ V+R VW K+ T+KDG P N AEK+KK E+ +S P S+ + D+LS Sbjct: 262 KTGSADPTEVTRLKVWVKSRTKKDGTPVNTNAAEKIKKAVEIVSSGPQSNGTNEAKDSLS 321 Query: 208 QVLGPE 225 Q+LGP+ Sbjct: 322 QLLGPD 327 >gb|AAG60150.1|AC074360_15 En/Spm-like transposon protein, putative [Arabidopsis thaliana] Length = 1431 Score = 63.2 bits (152), Expect = 2e-08 Identities = 31/75 (41%), Positives = 45/75 (60%) Frame = +1 Query: 1 RKGYARLEAEMKNQSANPSSVSRTDVWEKAHTRKDGQPANAEVAEKMKKIQELKASTPNS 180 RKG RL +MK +S +PS V+R W K+ T+KDG P N AE++ P S Sbjct: 1066 RKGMVRLAEDMKLESGDPSEVTRLKFWVKSRTKKDGTPVNTNAAEQIAAELVGSDGPPTS 1125 Query: 181 SSLKDDALSQVLGPE 225 ++ ++D LSQ+LGP+ Sbjct: 1126 ANPEEDHLSQLLGPD 1140