BLASTX nr result

ID: Coptis24_contig00032393 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032393
         (495 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB03186.1| En/Spm transposon protein-like [Arabidopsis thal...    74   1e-11
ref|XP_004134263.1| PREDICTED: uncharacterized protein LOC101217...    72   6e-11
gb|AAG50653.1|AC073433_5 hypothetical protein [Arabidopsis thali...    70   2e-10
gb|AAF88020.1| contains similarity to other Arabidopsis thaliana...    64   2e-08
gb|AAG60150.1|AC074360_15 En/Spm-like transposon protein, putati...    63   2e-08

>dbj|BAB03186.1| En/Spm transposon protein-like [Arabidopsis thaliana]
          Length = 1516

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 52/174 (29%), Positives = 80/174 (45%), Gaps = 9/174 (5%)
 Frame = +1

Query: 1    RKGYARLEAEMKNQSANPSSVSRTDVWEKAHTRKDGQPANAEVAEKMKKIQELKASTPNS 180
            RKG   L  EMK +S+NP  V+R+ VW   HT  DG+P   E AE ++KI+ + +   +S
Sbjct: 1078 RKGMISLAHEMKKKSSNPKLVTRSKVWIAGHTHSDGRPVKPEFAETIEKIKSIDSEMDSS 1137

Query: 181  S--SLKDDALSQVLGPEXXXXXXXXXXXXTPSKLGLAPKSNEKVDXXXXXXXXXXXXXXX 354
            S   LK+DA+SQVLG +            T +KL      +  V+               
Sbjct: 1138 SFTDLKEDAVSQVLGKDKPGRLRGMGRGVTATKLAFMLARDSHVE--------------K 1183

Query: 355  MERLQQETQDQLKAMQILVNQLV-------QTQAQYGSNKPEGVKCKLFRMVKE 495
            +E  Q +   +L+ +Q +V+ L        +      SN   GV+C+L    K+
Sbjct: 1184 LEATQADLLTKLEDLQNVVHGLAAKKEHVEEVSRSEASNVSAGVRCQLLDWCKD 1237


>ref|XP_004134263.1| PREDICTED: uncharacterized protein LOC101217008 [Cucumis sativus]
          Length = 1163

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 35/77 (45%), Positives = 54/77 (70%), Gaps = 2/77 (2%)
 Frame = +1

Query: 1    RKGYARLEAEMKNQSANPSSVSRTDVWEKAHTRKDGQPANAEVAEKMKKIQEL--KASTP 174
            RKGYARL  EMK    + SSVSR  VW KAH +KDG P N++VAE +++I+++  +    
Sbjct: 860  RKGYARLAEEMKKGCPDSSSVSRVAVWAKAHRKKDGNPVNSQVAEALERIEQIDNEGIKT 919

Query: 175  NSSSLKDDALSQVLGPE 225
             S+++ ++A+S+VLG +
Sbjct: 920  TSNNVGNEAISKVLGSD 936


>gb|AAG50653.1|AC073433_5 hypothetical protein [Arabidopsis thaliana]
          Length = 623

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 36/76 (47%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
 Frame = +1

Query: 1   RKGYARLEAEMKNQSANPSSVSRTDVWEKAHTRKDGQPANAEVAEKMKKIQELKASTPNS 180
           R+G  RL   MK +S NPS VSR  VW K+ TRKDG P N    EK+   + +K+ TP+S
Sbjct: 250 RRGMVRLAEHMKKESPNPSEVSRLQVWIKSRTRKDGTPVNTNTGEKIAS-EIVKSDTPSS 308

Query: 181 SSLK-DDALSQVLGPE 225
           +  +  D+LSQ+LGP+
Sbjct: 309 ACFEGQDSLSQLLGPD 324


>gb|AAF88020.1| contains similarity to other Arabidopsis thaliana putative
           transposon proteins [Arabidopsis thaliana]
          Length = 782

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 31/66 (46%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
 Frame = +1

Query: 34  KNQSANPSSVSRTDVWEKAHTRKDGQPANAEVAEKMKKIQELKASTPNSSSLKD--DALS 207
           K  SA+P+ V+R  VW K+ T+KDG P N   AEK+KK  E+ +S P S+   +  D+LS
Sbjct: 262 KTGSADPTEVTRLKVWVKSRTKKDGTPVNTNAAEKIKKAVEIVSSGPQSNGTNEAKDSLS 321

Query: 208 QVLGPE 225
           Q+LGP+
Sbjct: 322 QLLGPD 327


>gb|AAG60150.1|AC074360_15 En/Spm-like transposon protein, putative [Arabidopsis thaliana]
          Length = 1431

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 31/75 (41%), Positives = 45/75 (60%)
 Frame = +1

Query: 1    RKGYARLEAEMKNQSANPSSVSRTDVWEKAHTRKDGQPANAEVAEKMKKIQELKASTPNS 180
            RKG  RL  +MK +S +PS V+R   W K+ T+KDG P N   AE++          P S
Sbjct: 1066 RKGMVRLAEDMKLESGDPSEVTRLKFWVKSRTKKDGTPVNTNAAEQIAAELVGSDGPPTS 1125

Query: 181  SSLKDDALSQVLGPE 225
            ++ ++D LSQ+LGP+
Sbjct: 1126 ANPEEDHLSQLLGPD 1140


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