BLASTX nr result

ID: Coptis24_contig00032381 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032381
         (478 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332820.1| cc-nbs-lrr resistance protein [Populus trich...   101   7e-20
ref|XP_002332822.1| cc-nbs-lrr resistance protein [Populus trich...    97   1e-18
emb|CBI17900.3| unnamed protein product [Vitis vinifera]               96   3e-18
ref|XP_002263288.1| PREDICTED: disease resistance protein At4g27...    96   3e-18
emb|CAN77367.1| hypothetical protein VITISV_010740 [Vitis vinifera]    96   3e-18

>ref|XP_002332820.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222834208|gb|EEE72685.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 655

 Score =  101 bits (251), Expect = 7e-20
 Identities = 64/161 (39%), Positives = 91/161 (56%), Gaps = 10/161 (6%)
 Frame = +2

Query: 8   TKLCFLLSCLFPEDFEIKINALFCYVMGERILKDVDNLEEARKRLHI------SSCLLIK 169
           TKLCFLL CLFPED+ I I  L  Y +G  + +DV+++ +ARKR+++        C+L+ 
Sbjct: 401 TKLCFLLCCLFPEDYHIPIEDLTRYAVGYELHQDVESIGDARKRVYVEIKKLKDCCMLLD 460

Query: 170 NE-DGDIMMHDVVRDVAISIASEEGNEFIVKAVMRFVGRPDI--ELEKCKRLSLMDTTIR 340
            E D  + MHD+VRDVAI IAS +   FI+KA +     P      E C  +SLM   + 
Sbjct: 461 TETDEHVKMHDLVRDVAIRIASSQEYGFIIKAGIGLKEWPMSIKSFEACTTISLMGNKL- 519

Query: 341 CGLPDHIKAPQLLTLLLH-SCKMKIPHELFKEMKSLLTLDV 460
             LP+ ++ PQL  LLL     M +P   F+ MK +  L +
Sbjct: 520 TELPEGLECPQLKVLLLEVDYGMNVPERFFEGMKEIEVLSL 560


>ref|XP_002332822.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222834210|gb|EEE72687.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 817

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 63/161 (39%), Positives = 91/161 (56%), Gaps = 10/161 (6%)
 Frame = +2

Query: 8   TKLCFLLSCLFPEDFEIKINALFCYVMGERILKDVDNLEEARKRLHI------SSCLLIK 169
           TKLCFLL CLFPED+ I I  L  Y +G  + +D + +E+AR+++H+      + CLL+ 
Sbjct: 236 TKLCFLLCCLFPEDYNIPIEDLTRYAVGYGLHQDGEPIEDAREQVHVAIEYLKACCLLLG 295

Query: 170 NE-DGDIMMHDVVRDVAISIASEEGNEFIVKAVMRFVGRP--DIELEKCKRLSLMDTTIR 340
            E +  + MHD+VRDVAI IAS E   F+VK  +     P  +   E C  +SLM   + 
Sbjct: 296 TETEEHVRMHDLVRDVAIQIASSEEYGFMVKVGIGLKEWPMSNKSFEGCTTISLMGNKL- 354

Query: 341 CGLPDHIKAPQLLTLLLH-SCKMKIPHELFKEMKSLLTLDV 460
             LP+ +  PQL  LLL     M +P + F+ MK +  L +
Sbjct: 355 AKLPEGLVCPQLKVLLLELDDGMNVPEKFFEGMKEIEVLSL 395


>emb|CBI17900.3| unnamed protein product [Vitis vinifera]
          Length = 1042

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 66/165 (40%), Positives = 92/165 (55%), Gaps = 11/165 (6%)
 Frame = +2

Query: 2   DSTKLCFLLSCLFPEDFEIKINALFCYVMGERILKDVDNLEEAR-------KRLHISSCL 160
           +STK CFL+ CLFPED +I I  L  Y +G+ + ++ + +EEAR       K L   S L
Sbjct: 401 NSTKPCFLICCLFPEDTDISIEDLVKYGLGQGLFQEANTIEEARGRARSVVKYLKACSLL 460

Query: 161 LIKNEDGDIMMHDVVRDVAISIA-SEEGNEFIVKAVMRFVGRPDIE-LEKCKRLSLMDTT 334
           L   E+G + MHDVVRD+AI +A SEE N F+V++       P  +  E    +SLM   
Sbjct: 461 LDSTEEGGVKMHDVVRDMAILLASSEEDNAFMVQSGSALKEWPTKDSYEAYTAISLMSNE 520

Query: 335 IRCGLPDHIKAPQLLTLLLHSCK--MKIPHELFKEMKSLLTLDVS 463
           I   LPD +  P+L TLLL +     +IP + F    SL  LD++
Sbjct: 521 IE-ELPDGLVCPKLQTLLLQNNNDIQEIPDDFFGSFHSLRVLDLN 564


>ref|XP_002263288.1| PREDICTED: disease resistance protein At4g27190-like [Vitis
           vinifera]
          Length = 1063

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 66/165 (40%), Positives = 92/165 (55%), Gaps = 11/165 (6%)
 Frame = +2

Query: 2   DSTKLCFLLSCLFPEDFEIKINALFCYVMGERILKDVDNLEEAR-------KRLHISSCL 160
           +STK CFL+ CLFPED +I I  L  Y +G+ + ++ + +EEAR       K L   S L
Sbjct: 401 NSTKPCFLICCLFPEDTDISIEDLVKYGLGQGLFQEANTIEEARGRARSVVKYLKACSLL 460

Query: 161 LIKNEDGDIMMHDVVRDVAISIA-SEEGNEFIVKAVMRFVGRPDIE-LEKCKRLSLMDTT 334
           L   E+G + MHDVVRD+AI +A SEE N F+V++       P  +  E    +SLM   
Sbjct: 461 LDSTEEGGVKMHDVVRDMAILLASSEEDNAFMVQSGSALKEWPTKDSYEAYTAISLMSNE 520

Query: 335 IRCGLPDHIKAPQLLTLLLHSCK--MKIPHELFKEMKSLLTLDVS 463
           I   LPD +  P+L TLLL +     +IP + F    SL  LD++
Sbjct: 521 IE-ELPDGLVCPKLQTLLLQNNNDIQEIPDDFFGSFHSLRVLDLN 564


>emb|CAN77367.1| hypothetical protein VITISV_010740 [Vitis vinifera]
          Length = 975

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 66/165 (40%), Positives = 92/165 (55%), Gaps = 11/165 (6%)
 Frame = +2

Query: 2   DSTKLCFLLSCLFPEDFEIKINALFCYVMGERILKDVDNLEEAR-------KRLHISSCL 160
           +STK CFL+ CLFPED +I I  L  Y +G+ + ++ + +EEAR       K L   S L
Sbjct: 310 NSTKPCFLICCLFPEDTDISIEDLVKYGLGQGLFQEANTIEEARGRARSVVKYLKACSLL 369

Query: 161 LIKNEDGDIMMHDVVRDVAISIA-SEEGNEFIVKAVMRFVGRPDIE-LEKCKRLSLMDTT 334
           L   E+G + MHDVVRD+AI +A SEE N F+V++       P  +  E    +SLM   
Sbjct: 370 LDSTEEGGVKMHDVVRDMAILLASSEEDNAFMVQSGSALKEWPTKDSYEAYTAISLMSNE 429

Query: 335 IRCGLPDHIKAPQLLTLLLHSCK--MKIPHELFKEMKSLLTLDVS 463
           I   LPD +  P+L TLLL +     +IP + F    SL  LD++
Sbjct: 430 IE-ELPDGLVCPKLQTLLLQNNNDIQEIPDDFFGSFHSLRVLDLN 473


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