BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032379
         (376 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274352.1| PREDICTED: pentatricopeptide repeat-containi...    66   3e-09
ref|XP_003520106.1| PREDICTED: pentatricopeptide repeat-containi...    60   1e-07
emb|CBI38781.3| unnamed protein product [Vitis vinifera]               60   1e-07
ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containi...    60   1e-07
emb|CAN65443.1| hypothetical protein VITISV_011420 [Vitis vinifera]    60   1e-07

>ref|XP_002274352.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
           [Vitis vinifera]
          Length = 536

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 31/54 (57%), Positives = 41/54 (75%)
 Frame = -3

Query: 374 MKDRGVEKTRGCSSIDLNG*VHGFIAGEETHP*MEEIYQVLENMNELLDS*GLN 213
           M++RGV+K  GCSS+ +NG VH FIAGEETH  MEE+++VLE MN+ +   G N
Sbjct: 469 MENRGVDKAPGCSSVKINGVVHEFIAGEETHLQMEEVHRVLEKMNKQMGYSGFN 522


>ref|XP_003520106.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g20540-like [Glycine max]
          Length = 518

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 28/49 (57%), Positives = 39/49 (79%)
 Frame = -3

Query: 374 MKDRGVEKTRGCSSIDLNG*VHGFIAGEETHP*MEEIYQVLENMNELLD 228
           M+++GV+K  GCSS++++G V  FIAGEETHP MEEI+ VLE ++  LD
Sbjct: 470 MRNKGVDKAPGCSSVEIDGVVSEFIAGEETHPQMEEIHSVLEILHMQLD 518


>emb|CBI38781.3| unnamed protein product [Vitis vinifera]
          Length = 589

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 28/63 (44%), Positives = 43/63 (68%)
 Frame = -3

Query: 374 MKDRGVEKTRGCSSIDLNG*VHGFIAGEETHP*MEEIYQVLENMNELLDS*GLNLPNICC 195
           MK++G+EKT GCS I+LNG +H F+AG+ +H   E+IY ++E M   ++  G ++P    
Sbjct: 445 MKNKGIEKTPGCSWIELNGMIHQFVAGDRSHLQTEQIYAMIEEMTRRVNLDGGHVPGTAN 504

Query: 194 VLF 186
           VLF
Sbjct: 505 VLF 507


>ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 687

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 28/63 (44%), Positives = 43/63 (68%)
 Frame = -3

Query: 374 MKDRGVEKTRGCSSIDLNG*VHGFIAGEETHP*MEEIYQVLENMNELLDS*GLNLPNICC 195
           MK++G+EKT GCS I+LNG +H F+AG+ +H   E+IY ++E M   ++  G ++P    
Sbjct: 543 MKNKGIEKTPGCSWIELNGMIHQFVAGDRSHLQTEQIYAMIEEMTRRVNLDGGHVPGTAN 602

Query: 194 VLF 186
           VLF
Sbjct: 603 VLF 605


>emb|CAN65443.1| hypothetical protein VITISV_011420 [Vitis vinifera]
          Length = 485

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 28/63 (44%), Positives = 43/63 (68%)
 Frame = -3

Query: 374 MKDRGVEKTRGCSSIDLNG*VHGFIAGEETHP*MEEIYQVLENMNELLDS*GLNLPNICC 195
           MK++G+EKT GCS I+LNG +H F+AG+ +H   E+IY ++E M   ++  G ++P    
Sbjct: 341 MKNKGIEKTPGCSWIELNGMIHQFVAGDRSHLQTEQIYAMIEEMTRRVNLDGGHVPGTAN 400

Query: 194 VLF 186
           VLF
Sbjct: 401 VLF 403