BLASTX nr result
ID: Coptis24_contig00032375
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00032375 (525 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI17294.3| unnamed protein product [Vitis vinifera] 94 9e-18 ref|XP_002265361.1| PREDICTED: uncharacterized protein LOC100264... 77 2e-12 ref|XP_002321106.1| predicted protein [Populus trichocarpa] gi|2... 58 7e-07 >emb|CBI17294.3| unnamed protein product [Vitis vinifera] Length = 1251 Score = 94.4 bits (233), Expect = 9e-18 Identities = 67/177 (37%), Positives = 93/177 (52%), Gaps = 3/177 (1%) Frame = -2 Query: 524 SNGSYATSWNARRSLNLLKMSLNRPMSLPHVXXXXXXXXXXXXXXXERLSVQFGLRC--- 354 SNGSY+T WNARRSLNLLK SLNRP +LPHV E+L VQ GL+ Sbjct: 489 SNGSYSTGWNARRSLNLLKFSLNRPTTLPHVDDDGDEEMEIDEEAVEKLWVQVGLQSVNG 548 Query: 353 KEDYVNEESKLQHSHSDSQVACDRLKTADKIVSSSSDEIVLRIQESNDPSGNLVSEGQSV 174 +E+ + K+++ SDSQ + S+ S ++ + S D N+ E S Sbjct: 549 EENSKIDAGKIENVQSDSQFMASEEGIIGEPQSNMSQNECIKEEASEDTDVNM-EEEISE 607 Query: 173 VGIISESVGGDSAIVPVASLPHNSLITSPNSVFPSEPIVMPSDVSPVLKSPTLSVSP 3 I+E IV ++ N L+ + + PS ++P ++SPVLKSPTLSVSP Sbjct: 608 QSEINEDESQIHLIVKASNDSPNGLM---DGIPPSNLSIVPCNISPVLKSPTLSVSP 661 >ref|XP_002265361.1| PREDICTED: uncharacterized protein LOC100264192 [Vitis vinifera] Length = 1354 Score = 77.0 bits (188), Expect = 2e-12 Identities = 72/240 (30%), Positives = 97/240 (40%), Gaps = 66/240 (27%) Frame = -2 Query: 524 SNGSYATSWNARRSLNLLKMSLNRPMSLPHVXXXXXXXXXXXXXXXERLSVQFGLRC--- 354 SNGSY+T WNARRSLNLLK SLNRP +LPHV E+L VQ GL+ Sbjct: 489 SNGSYSTGWNARRSLNLLKFSLNRPTTLPHVDDDGDEEMEIDEEAVEKLWVQVGLQSVNG 548 Query: 353 KEDYVNEESKLQHSHSDSQVACDRLKTADKIVSSSSDEIVLRIQESNDPSGNLVSE---- 186 +E+ + K+++ SDSQ + S+ S ++ + S D N+ E Sbjct: 549 EENSKIDAGKIENVQSDSQFMASEEGIIGEPQSNMSQNECIKEEASEDTDVNMEEEISEQ 608 Query: 185 -----------GQSVVGI-------------ISESVGGDSAIVPVASLP------HNSLI 96 G+ V SE +S I + S+P H + Sbjct: 609 VEKHETMIVDCGEQVKNTQNSSQTDLLSPHNQSEINEDESQIHLIVSMPNENPSEHKVVE 668 Query: 95 TSPNSVF-----------------------------PSEPIVMPSDVSPVLKSPTLSVSP 3 SP F PS ++P ++SPVLKSPTLSVSP Sbjct: 669 NSPTCQFSESVGAVSLGISEAEASNDSPNGLMDGIPPSNLSIVPCNISPVLKSPTLSVSP 728 >ref|XP_002321106.1| predicted protein [Populus trichocarpa] gi|222861879|gb|EEE99421.1| predicted protein [Populus trichocarpa] Length = 1289 Score = 58.2 bits (139), Expect = 7e-07 Identities = 57/201 (28%), Positives = 89/201 (44%), Gaps = 27/201 (13%) Frame = -2 Query: 524 SNGSYATSWNARRSLNLLKMSLNRPMSLPHVXXXXXXXXXXXXXXXERLSVQFGL----R 357 +N + T W+ R+SLN+LK ++ LP V E+L +Q GL Sbjct: 472 ANSNNPTGWDPRKSLNILKSLIHPLPRLPQVDEDGDEMMEIDEGAVEKLCIQVGLGPAGA 531 Query: 356 CKEDYVNE-ESKLQHSHSDSQVACDRL--KTADK---IVSSSSDEIVLRIQES-NDPSGN 198 ++YV+E S + DS V + + A+K ++S ++ ES +P+ Sbjct: 532 TYQNYVDEGRSIIDQGTEDSDVDMEETIPEQAEKHEILISGCAEPARNNTSESCEEPAEE 591 Query: 197 LVSEGQSVVGIISE----------------SVGGDSAIVPVASLPHNSLITSPNSVFPSE 66 + SV +I+E S G S + P+ S + N V PS Sbjct: 592 KGTLRSSVSKLITEESPNKMVEVRSSCTSGSQSGFSTSISTTDEPNGSQKETGNCVSPSS 651 Query: 65 PIVMPSDVSPVLKSPTLSVSP 3 ++PS+VSP+LKSPT SVSP Sbjct: 652 LSIVPSEVSPILKSPTPSVSP 672