BLASTX nr result

ID: Coptis24_contig00032375 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032375
         (525 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17294.3| unnamed protein product [Vitis vinifera]               94   9e-18
ref|XP_002265361.1| PREDICTED: uncharacterized protein LOC100264...    77   2e-12
ref|XP_002321106.1| predicted protein [Populus trichocarpa] gi|2...    58   7e-07

>emb|CBI17294.3| unnamed protein product [Vitis vinifera]
          Length = 1251

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 67/177 (37%), Positives = 93/177 (52%), Gaps = 3/177 (1%)
 Frame = -2

Query: 524  SNGSYATSWNARRSLNLLKMSLNRPMSLPHVXXXXXXXXXXXXXXXERLSVQFGLRC--- 354
            SNGSY+T WNARRSLNLLK SLNRP +LPHV               E+L VQ GL+    
Sbjct: 489  SNGSYSTGWNARRSLNLLKFSLNRPTTLPHVDDDGDEEMEIDEEAVEKLWVQVGLQSVNG 548

Query: 353  KEDYVNEESKLQHSHSDSQVACDRLKTADKIVSSSSDEIVLRIQESNDPSGNLVSEGQSV 174
            +E+   +  K+++  SDSQ          +  S+ S    ++ + S D   N+  E  S 
Sbjct: 549  EENSKIDAGKIENVQSDSQFMASEEGIIGEPQSNMSQNECIKEEASEDTDVNM-EEEISE 607

Query: 173  VGIISESVGGDSAIVPVASLPHNSLITSPNSVFPSEPIVMPSDVSPVLKSPTLSVSP 3
               I+E       IV  ++   N L+   + + PS   ++P ++SPVLKSPTLSVSP
Sbjct: 608  QSEINEDESQIHLIVKASNDSPNGLM---DGIPPSNLSIVPCNISPVLKSPTLSVSP 661


>ref|XP_002265361.1| PREDICTED: uncharacterized protein LOC100264192 [Vitis vinifera]
          Length = 1354

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 72/240 (30%), Positives = 97/240 (40%), Gaps = 66/240 (27%)
 Frame = -2

Query: 524  SNGSYATSWNARRSLNLLKMSLNRPMSLPHVXXXXXXXXXXXXXXXERLSVQFGLRC--- 354
            SNGSY+T WNARRSLNLLK SLNRP +LPHV               E+L VQ GL+    
Sbjct: 489  SNGSYSTGWNARRSLNLLKFSLNRPTTLPHVDDDGDEEMEIDEEAVEKLWVQVGLQSVNG 548

Query: 353  KEDYVNEESKLQHSHSDSQVACDRLKTADKIVSSSSDEIVLRIQESNDPSGNLVSE---- 186
            +E+   +  K+++  SDSQ          +  S+ S    ++ + S D   N+  E    
Sbjct: 549  EENSKIDAGKIENVQSDSQFMASEEGIIGEPQSNMSQNECIKEEASEDTDVNMEEEISEQ 608

Query: 185  -----------GQSVVGI-------------ISESVGGDSAIVPVASLP------HNSLI 96
                       G+ V                 SE    +S I  + S+P      H  + 
Sbjct: 609  VEKHETMIVDCGEQVKNTQNSSQTDLLSPHNQSEINEDESQIHLIVSMPNENPSEHKVVE 668

Query: 95   TSPNSVF-----------------------------PSEPIVMPSDVSPVLKSPTLSVSP 3
             SP   F                             PS   ++P ++SPVLKSPTLSVSP
Sbjct: 669  NSPTCQFSESVGAVSLGISEAEASNDSPNGLMDGIPPSNLSIVPCNISPVLKSPTLSVSP 728


>ref|XP_002321106.1| predicted protein [Populus trichocarpa] gi|222861879|gb|EEE99421.1|
            predicted protein [Populus trichocarpa]
          Length = 1289

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 57/201 (28%), Positives = 89/201 (44%), Gaps = 27/201 (13%)
 Frame = -2

Query: 524  SNGSYATSWNARRSLNLLKMSLNRPMSLPHVXXXXXXXXXXXXXXXERLSVQFGL----R 357
            +N +  T W+ R+SLN+LK  ++    LP V               E+L +Q GL     
Sbjct: 472  ANSNNPTGWDPRKSLNILKSLIHPLPRLPQVDEDGDEMMEIDEGAVEKLCIQVGLGPAGA 531

Query: 356  CKEDYVNE-ESKLQHSHSDSQVACDRL--KTADK---IVSSSSDEIVLRIQES-NDPSGN 198
              ++YV+E  S +     DS V  +    + A+K   ++S  ++       ES  +P+  
Sbjct: 532  TYQNYVDEGRSIIDQGTEDSDVDMEETIPEQAEKHEILISGCAEPARNNTSESCEEPAEE 591

Query: 197  LVSEGQSVVGIISE----------------SVGGDSAIVPVASLPHNSLITSPNSVFPSE 66
              +   SV  +I+E                S  G S  +     P+ S   + N V PS 
Sbjct: 592  KGTLRSSVSKLITEESPNKMVEVRSSCTSGSQSGFSTSISTTDEPNGSQKETGNCVSPSS 651

Query: 65   PIVMPSDVSPVLKSPTLSVSP 3
              ++PS+VSP+LKSPT SVSP
Sbjct: 652  LSIVPSEVSPILKSPTPSVSP 672


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