BLASTX nr result
ID: Coptis24_contig00032368
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00032368 (332 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002270810.2| PREDICTED: uncharacterized protein LOC100244... 86 9e-19 emb|CAN76090.1| hypothetical protein VITISV_036512 [Vitis vinifera] 84 2e-14 ref|XP_002520065.1| conserved hypothetical protein [Ricinus comm... 47 6e-07 emb|CAE04131.3| OSJNBa0009P12.18 [Oryza sativa Japonica Group] 49 1e-06 gb|EEE61590.1| hypothetical protein OsJ_15984 [Oryza sativa Japo... 49 1e-06 >ref|XP_002270810.2| PREDICTED: uncharacterized protein LOC100244219 [Vitis vinifera] gi|297737287|emb|CBI26488.3| unnamed protein product [Vitis vinifera] Length = 439 Score = 86.3 bits (212), Expect(2) = 9e-19 Identities = 44/62 (70%), Positives = 49/62 (79%) Frame = +3 Query: 87 RRYAVQAPVSEEEAKTVVSPRKGPRISNGLNWALAGKGVIVQDKSHYNLSSSELKHFGGS 266 RRYAV APV EEEA+TVV PR+GP S GLNWALAGKGVIV DK+ NL SSEL+ G + Sbjct: 28 RRYAVSAPVVEEEAETVVFPREGPGFSYGLNWALAGKGVIVNDKAFRNLKSSELQQKGAT 87 Query: 267 IA 272 IA Sbjct: 88 IA 89 Score = 32.0 bits (71), Expect(2) = 9e-19 Identities = 12/17 (70%), Positives = 16/17 (94%) Frame = +1 Query: 277 SETLSGIPVHVRGDVTG 327 +E+LSG+P+HVRGDV G Sbjct: 89 AESLSGLPIHVRGDVLG 105 >emb|CAN76090.1| hypothetical protein VITISV_036512 [Vitis vinifera] Length = 1616 Score = 83.6 bits (205), Expect = 2e-14 Identities = 42/62 (67%), Positives = 49/62 (79%) Frame = +3 Query: 87 RRYAVQAPVSEEEAKTVVSPRKGPRISNGLNWALAGKGVIVQDKSHYNLSSSELKHFGGS 266 ++YAV APV EEEA+TVV PR+GP S GLNWALAGKGVIV DK+ NL SSEL+ G + Sbjct: 932 KKYAVSAPVVEEEAETVVFPREGPGFSYGLNWALAGKGVIVNDKAFRNLKSSELQXKGAT 991 Query: 267 IA 272 IA Sbjct: 992 IA 993 >ref|XP_002520065.1| conserved hypothetical protein [Ricinus communis] gi|223540829|gb|EEF42389.1| conserved hypothetical protein [Ricinus communis] Length = 380 Score = 47.0 bits (110), Expect(2) = 6e-07 Identities = 24/46 (52%), Positives = 32/46 (69%) Frame = +3 Query: 135 VVSPRKGPRISNGLNWALAGKGVIVQDKSHYNLSSSELKHFGGSIA 272 +V +G S GLNWALA KGVIV+DK+ NL+SS+L G +I+ Sbjct: 1 MVDAGEGSGFSYGLNWALAVKGVIVKDKAFKNLNSSQLHQKGATIS 46 Score = 31.2 bits (69), Expect(2) = 6e-07 Identities = 12/17 (70%), Positives = 16/17 (94%) Frame = +1 Query: 277 SETLSGIPVHVRGDVTG 327 SE+LSG+PVH+RG+V G Sbjct: 46 SESLSGLPVHIRGNVLG 62 >emb|CAE04131.3| OSJNBa0009P12.18 [Oryza sativa Japonica Group] Length = 485 Score = 48.5 bits (114), Expect(2) = 1e-06 Identities = 21/40 (52%), Positives = 29/40 (72%) Frame = +3 Query: 147 RKGPRISNGLNWALAGKGVIVQDKSHYNLSSSELKHFGGS 266 R+ +S GLNWA+AG+GV+V+DK YNL SEL+ G + Sbjct: 40 REDQEVSYGLNWAIAGRGVVVKDKVFYNLEKSELQKGGAA 79 Score = 28.5 bits (62), Expect(2) = 1e-06 Identities = 11/16 (68%), Positives = 15/16 (93%) Frame = +1 Query: 274 FSETLSGIPVHVRGDV 321 ++E LSGIP+HVRG+V Sbjct: 80 YTECLSGIPLHVRGNV 95 >gb|EEE61590.1| hypothetical protein OsJ_15984 [Oryza sativa Japonica Group] Length = 435 Score = 48.5 bits (114), Expect(2) = 1e-06 Identities = 21/41 (51%), Positives = 29/41 (70%) Frame = +3 Query: 144 PRKGPRISNGLNWALAGKGVIVQDKSHYNLSSSELKHFGGS 266 P + +S GLNWA+AG+GV+V+DK YNL SEL+ G + Sbjct: 38 PCRDQEVSYGLNWAIAGRGVVVKDKVFYNLEKSELQKGGAA 78 Score = 28.5 bits (62), Expect(2) = 1e-06 Identities = 11/16 (68%), Positives = 15/16 (93%) Frame = +1 Query: 274 FSETLSGIPVHVRGDV 321 ++E LSGIP+HVRG+V Sbjct: 79 YTECLSGIPLHVRGNV 94