BLASTX nr result

ID: Coptis24_contig00032368 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032368
         (332 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270810.2| PREDICTED: uncharacterized protein LOC100244...    86   9e-19
emb|CAN76090.1| hypothetical protein VITISV_036512 [Vitis vinifera]    84   2e-14
ref|XP_002520065.1| conserved hypothetical protein [Ricinus comm...    47   6e-07
emb|CAE04131.3| OSJNBa0009P12.18 [Oryza sativa Japonica Group]         49   1e-06
gb|EEE61590.1| hypothetical protein OsJ_15984 [Oryza sativa Japo...    49   1e-06

>ref|XP_002270810.2| PREDICTED: uncharacterized protein LOC100244219 [Vitis vinifera]
           gi|297737287|emb|CBI26488.3| unnamed protein product
           [Vitis vinifera]
          Length = 439

 Score = 86.3 bits (212), Expect(2) = 9e-19
 Identities = 44/62 (70%), Positives = 49/62 (79%)
 Frame = +3

Query: 87  RRYAVQAPVSEEEAKTVVSPRKGPRISNGLNWALAGKGVIVQDKSHYNLSSSELKHFGGS 266
           RRYAV APV EEEA+TVV PR+GP  S GLNWALAGKGVIV DK+  NL SSEL+  G +
Sbjct: 28  RRYAVSAPVVEEEAETVVFPREGPGFSYGLNWALAGKGVIVNDKAFRNLKSSELQQKGAT 87

Query: 267 IA 272
           IA
Sbjct: 88  IA 89



 Score = 32.0 bits (71), Expect(2) = 9e-19
 Identities = 12/17 (70%), Positives = 16/17 (94%)
 Frame = +1

Query: 277 SETLSGIPVHVRGDVTG 327
           +E+LSG+P+HVRGDV G
Sbjct: 89  AESLSGLPIHVRGDVLG 105


>emb|CAN76090.1| hypothetical protein VITISV_036512 [Vitis vinifera]
          Length = 1616

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 42/62 (67%), Positives = 49/62 (79%)
 Frame = +3

Query: 87   RRYAVQAPVSEEEAKTVVSPRKGPRISNGLNWALAGKGVIVQDKSHYNLSSSELKHFGGS 266
            ++YAV APV EEEA+TVV PR+GP  S GLNWALAGKGVIV DK+  NL SSEL+  G +
Sbjct: 932  KKYAVSAPVVEEEAETVVFPREGPGFSYGLNWALAGKGVIVNDKAFRNLKSSELQXKGAT 991

Query: 267  IA 272
            IA
Sbjct: 992  IA 993


>ref|XP_002520065.1| conserved hypothetical protein [Ricinus communis]
           gi|223540829|gb|EEF42389.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 380

 Score = 47.0 bits (110), Expect(2) = 6e-07
 Identities = 24/46 (52%), Positives = 32/46 (69%)
 Frame = +3

Query: 135 VVSPRKGPRISNGLNWALAGKGVIVQDKSHYNLSSSELKHFGGSIA 272
           +V   +G   S GLNWALA KGVIV+DK+  NL+SS+L   G +I+
Sbjct: 1   MVDAGEGSGFSYGLNWALAVKGVIVKDKAFKNLNSSQLHQKGATIS 46



 Score = 31.2 bits (69), Expect(2) = 6e-07
 Identities = 12/17 (70%), Positives = 16/17 (94%)
 Frame = +1

Query: 277 SETLSGIPVHVRGDVTG 327
           SE+LSG+PVH+RG+V G
Sbjct: 46  SESLSGLPVHIRGNVLG 62


>emb|CAE04131.3| OSJNBa0009P12.18 [Oryza sativa Japonica Group]
          Length = 485

 Score = 48.5 bits (114), Expect(2) = 1e-06
 Identities = 21/40 (52%), Positives = 29/40 (72%)
 Frame = +3

Query: 147 RKGPRISNGLNWALAGKGVIVQDKSHYNLSSSELKHFGGS 266
           R+   +S GLNWA+AG+GV+V+DK  YNL  SEL+  G +
Sbjct: 40  REDQEVSYGLNWAIAGRGVVVKDKVFYNLEKSELQKGGAA 79



 Score = 28.5 bits (62), Expect(2) = 1e-06
 Identities = 11/16 (68%), Positives = 15/16 (93%)
 Frame = +1

Query: 274 FSETLSGIPVHVRGDV 321
           ++E LSGIP+HVRG+V
Sbjct: 80  YTECLSGIPLHVRGNV 95


>gb|EEE61590.1| hypothetical protein OsJ_15984 [Oryza sativa Japonica Group]
          Length = 435

 Score = 48.5 bits (114), Expect(2) = 1e-06
 Identities = 21/41 (51%), Positives = 29/41 (70%)
 Frame = +3

Query: 144 PRKGPRISNGLNWALAGKGVIVQDKSHYNLSSSELKHFGGS 266
           P +   +S GLNWA+AG+GV+V+DK  YNL  SEL+  G +
Sbjct: 38  PCRDQEVSYGLNWAIAGRGVVVKDKVFYNLEKSELQKGGAA 78



 Score = 28.5 bits (62), Expect(2) = 1e-06
 Identities = 11/16 (68%), Positives = 15/16 (93%)
 Frame = +1

Query: 274 FSETLSGIPVHVRGDV 321
           ++E LSGIP+HVRG+V
Sbjct: 79  YTECLSGIPLHVRGNV 94