BLASTX nr result

ID: Coptis24_contig00032365 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032365
         (499 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21786.3| unnamed protein product [Vitis vinifera]              286   2e-75
ref|XP_002269074.1| PREDICTED: GTP-dependent nucleic acid-bindin...   286   2e-75
ref|XP_002513417.1| GTP-binding protein, putative [Ricinus commu...   278   4e-73
ref|XP_002299001.1| predicted protein [Populus trichocarpa] gi|2...   275   4e-72
ref|XP_004144639.1| PREDICTED: GTP-dependent nucleic acid-bindin...   273   1e-71

>emb|CBI21786.3| unnamed protein product [Vitis vinifera]
          Length = 370

 Score =  286 bits (731), Expect = 2e-75
 Identities = 142/166 (85%), Positives = 159/166 (95%)
 Frame = -2

Query: 498 LKKGKGKDSPSKMKEEAEKSALERVRNALMDGKPARSVALTEFEKESVEHLCLLTMKPVI 319
           LKKGK KDS SK+KEEAEKSALER+R ALMDGKPARSV LT+FEK++++HLCLLTMKP+I
Sbjct: 148 LKKGKAKDSQSKLKEEAEKSALERIREALMDGKPARSVTLTDFEKDAIKHLCLLTMKPII 207

Query: 318 YVANVAESELAEPSNNPHVKEVMNLATELQSGLVTISAQVESELTELPSEERIEFLNSLG 139
           YVANVAES+LAEP +NP+VKEVMNLA+ELQSG+VTISAQVESELTELPSEER EFL SLG
Sbjct: 208 YVANVAESDLAEPGSNPYVKEVMNLASELQSGIVTISAQVESELTELPSEERTEFLKSLG 267

Query: 138 VTESGLGNLIRATYSLLGMRTYFTAGEKETKAWTILSGMTAPQAAG 1
           V+ESGLGNLIRATYSLLG+RTYFT+GEKETKAWTIL+GMTAPQAAG
Sbjct: 268 VSESGLGNLIRATYSLLGLRTYFTSGEKETKAWTILAGMTAPQAAG 313


>ref|XP_002269074.1| PREDICTED: GTP-dependent nucleic acid-binding protein engD-like
           [Vitis vinifera]
          Length = 422

 Score =  286 bits (731), Expect = 2e-75
 Identities = 142/166 (85%), Positives = 159/166 (95%)
 Frame = -2

Query: 498 LKKGKGKDSPSKMKEEAEKSALERVRNALMDGKPARSVALTEFEKESVEHLCLLTMKPVI 319
           LKKGK KDS SK+KEEAEKSALER+R ALMDGKPARSV LT+FEK++++HLCLLTMKP+I
Sbjct: 200 LKKGKAKDSQSKLKEEAEKSALERIREALMDGKPARSVTLTDFEKDAIKHLCLLTMKPII 259

Query: 318 YVANVAESELAEPSNNPHVKEVMNLATELQSGLVTISAQVESELTELPSEERIEFLNSLG 139
           YVANVAES+LAEP +NP+VKEVMNLA+ELQSG+VTISAQVESELTELPSEER EFL SLG
Sbjct: 260 YVANVAESDLAEPGSNPYVKEVMNLASELQSGIVTISAQVESELTELPSEERTEFLKSLG 319

Query: 138 VTESGLGNLIRATYSLLGMRTYFTAGEKETKAWTILSGMTAPQAAG 1
           V+ESGLGNLIRATYSLLG+RTYFT+GEKETKAWTIL+GMTAPQAAG
Sbjct: 320 VSESGLGNLIRATYSLLGLRTYFTSGEKETKAWTILAGMTAPQAAG 365


>ref|XP_002513417.1| GTP-binding protein, putative [Ricinus communis]
           gi|223547325|gb|EEF48820.1| GTP-binding protein,
           putative [Ricinus communis]
          Length = 417

 Score =  278 bits (710), Expect = 4e-73
 Identities = 137/166 (82%), Positives = 157/166 (94%)
 Frame = -2

Query: 498 LKKGKGKDSPSKMKEEAEKSALERVRNALMDGKPARSVALTEFEKESVEHLCLLTMKPVI 319
           LKKGK KDS SK+KEEAEKSALER++ ALMDGKPARSVAL++FEK++++HLCLLTMKPVI
Sbjct: 195 LKKGKAKDSQSKLKEEAEKSALERIQGALMDGKPARSVALSDFEKDAIKHLCLLTMKPVI 254

Query: 318 YVANVAESELAEPSNNPHVKEVMNLATELQSGLVTISAQVESELTELPSEERIEFLNSLG 139
           YVANVAES+LA P NNPHVKEVMNLA++LQSGLV +SAQVESELTELP +ER E+L SLG
Sbjct: 255 YVANVAESDLAVPDNNPHVKEVMNLASDLQSGLVAVSAQVESELTELPVDERTEYLKSLG 314

Query: 138 VTESGLGNLIRATYSLLGMRTYFTAGEKETKAWTILSGMTAPQAAG 1
           V+ESGLGNLIRATY+LLG+RTYFT+GEKETKAWTIL+GMTAPQAAG
Sbjct: 315 VSESGLGNLIRATYNLLGLRTYFTSGEKETKAWTILAGMTAPQAAG 360


>ref|XP_002299001.1| predicted protein [Populus trichocarpa] gi|222846259|gb|EEE83806.1|
           predicted protein [Populus trichocarpa]
          Length = 370

 Score =  275 bits (702), Expect = 4e-72
 Identities = 140/166 (84%), Positives = 155/166 (93%)
 Frame = -2

Query: 498 LKKGKGKDSPSKMKEEAEKSALERVRNALMDGKPARSVALTEFEKESVEHLCLLTMKPVI 319
           LKKGK +DS SK+KEEAEKSALER+R ALMDGKPARSVALT+FEK++V+HLCLLTMKPVI
Sbjct: 148 LKKGKARDSQSKLKEEAEKSALERIREALMDGKPARSVALTDFEKDAVKHLCLLTMKPVI 207

Query: 318 YVANVAESELAEPSNNPHVKEVMNLATELQSGLVTISAQVESELTELPSEERIEFLNSLG 139
           YVANVAESELA+  NNP+VKEVMNLA+ELQSGLVTISAQVESELTELP EER EFL SLG
Sbjct: 208 YVANVAESELADAGNNPYVKEVMNLASELQSGLVTISAQVESELTELPFEERNEFLKSLG 267

Query: 138 VTESGLGNLIRATYSLLGMRTYFTAGEKETKAWTILSGMTAPQAAG 1
           V+ESGLGNLI ATY LLG+RTYFT+GEKE+KAWTI +GMTAPQAAG
Sbjct: 268 VSESGLGNLITATYILLGLRTYFTSGEKESKAWTIHAGMTAPQAAG 313


>ref|XP_004144639.1| PREDICTED: GTP-dependent nucleic acid-binding protein EngD-like
           [Cucumis sativus] gi|449523505|ref|XP_004168764.1|
           PREDICTED: GTP-dependent nucleic acid-binding protein
           EngD-like [Cucumis sativus]
          Length = 421

 Score =  273 bits (698), Expect = 1e-71
 Identities = 134/166 (80%), Positives = 157/166 (94%)
 Frame = -2

Query: 498 LKKGKGKDSPSKMKEEAEKSALERVRNALMDGKPARSVALTEFEKESVEHLCLLTMKPVI 319
           LKKGK KDS SK+KEEAEKSALE+++  L+DGKPARSV LT+FEK++++HLCLLTMKPVI
Sbjct: 199 LKKGKAKDSQSKVKEEAEKSALEKIQKVLLDGKPARSVTLTDFEKDAIKHLCLLTMKPVI 258

Query: 318 YVANVAESELAEPSNNPHVKEVMNLATELQSGLVTISAQVESELTELPSEERIEFLNSLG 139
           YVANVAES+LAEP++N HVKEVM LA+ELQSG+VT+SAQVESEL+ELPSEER E+L SLG
Sbjct: 259 YVANVAESDLAEPASNLHVKEVMGLASELQSGIVTVSAQVESELSELPSEERFEYLKSLG 318

Query: 138 VTESGLGNLIRATYSLLGMRTYFTAGEKETKAWTILSGMTAPQAAG 1
           V+ESGLGNLIRATY+LLG+RTYFT+GEKETKAWTIL+GMTAPQAAG
Sbjct: 319 VSESGLGNLIRATYNLLGLRTYFTSGEKETKAWTILAGMTAPQAAG 364