BLASTX nr result

ID: Coptis24_contig00032359 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032359
         (483 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519623.1| conserved hypothetical protein [Ricinus comm...   246   2e-63
ref|XP_002321345.1| predicted protein [Populus trichocarpa] gi|2...   241   3e-62
emb|CBI35345.3| unnamed protein product [Vitis vinifera]              240   7e-62
ref|XP_002268419.1| PREDICTED: uncharacterized protein LOC100242...   240   7e-62
ref|XP_002321941.1| predicted protein [Populus trichocarpa] gi|2...   237   8e-61

>ref|XP_002519623.1| conserved hypothetical protein [Ricinus communis]
           gi|223541213|gb|EEF42768.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 246

 Score =  246 bits (627), Expect = 2e-63
 Identities = 128/162 (79%), Positives = 138/162 (85%), Gaps = 1/162 (0%)
 Frame = -1

Query: 483 INRCIWVQTMMEDSSKNGVLAVQTLRNNIMASTLLASTAIMLSSIIAVLMTSKNGNH-TQ 307
           INR  WV+ MMED SKNGVLAVQTLRNNIMASTLLASTAIMLSS+IAVLMTS   N  T 
Sbjct: 43  INRRFWVRAMMEDPSKNGVLAVQTLRNNIMASTLLASTAIMLSSLIAVLMTSGYANRSTW 102

Query: 306 SLLYGDESELGFSIKFFAILVCFLLAFLLNVQSIRYYSHASILINVPVNKITSLASKSAH 127
           + +YGD SELG SIKFF+ILVCFL+AFL NVQSIRYYSHASILINVP  K+ S    + H
Sbjct: 103 NFVYGDTSELGLSIKFFSILVCFLVAFLFNVQSIRYYSHASILINVPFRKMPSF-HNNHH 161

Query: 126 LTVEYVGKAVNRGSYFWSLGLRAFYFSFPLFLWIFGPIPMFL 1
           LT EYV ++VNRGSYFWSLGLRAFYFSFPLFLWIFGPIPMFL
Sbjct: 162 LTAEYVSRSVNRGSYFWSLGLRAFYFSFPLFLWIFGPIPMFL 203


>ref|XP_002321345.1| predicted protein [Populus trichocarpa]
           gi|224151094|ref|XP_002337058.1| predicted protein
           [Populus trichocarpa] gi|222837933|gb|EEE76298.1|
           predicted protein [Populus trichocarpa]
           gi|222868341|gb|EEF05472.1| predicted protein [Populus
           trichocarpa]
          Length = 219

 Score =  241 bits (616), Expect = 3e-62
 Identities = 124/162 (76%), Positives = 141/162 (87%), Gaps = 1/162 (0%)
 Frame = -1

Query: 483 INRCIWVQTMMEDSSKNGVLAVQTLRNNIMASTLLASTAIMLSSIIAVLMTSKNGNHT-Q 307
           INR  WV+ MMED SKNGVLAVQTLRNNIMAST+LASTAIMLSS+IAVLMTS +G+ + +
Sbjct: 43  INRRFWVRAMMEDVSKNGVLAVQTLRNNIMASTVLASTAIMLSSLIAVLMTSGSGDKSAR 102

Query: 306 SLLYGDESELGFSIKFFAILVCFLLAFLLNVQSIRYYSHASILINVPVNKITSLASKSAH 127
           + ++GD SELG SIKFF+ILVCFL+AFLLNVQSIRYYSHASILINVP  K+     +  H
Sbjct: 103 NFVFGDRSELGLSIKFFSILVCFLVAFLLNVQSIRYYSHASILINVPFKKMCP-NHRHQH 161

Query: 126 LTVEYVGKAVNRGSYFWSLGLRAFYFSFPLFLWIFGPIPMFL 1
           L+ EYV ++VNRGSYFWSLGLRAFYFSFPLFLWIFGPIPMFL
Sbjct: 162 LSTEYVARSVNRGSYFWSLGLRAFYFSFPLFLWIFGPIPMFL 203


>emb|CBI35345.3| unnamed protein product [Vitis vinifera]
          Length = 262

 Score =  240 bits (613), Expect = 7e-62
 Identities = 122/161 (75%), Positives = 137/161 (85%)
 Frame = -1

Query: 483 INRCIWVQTMMEDSSKNGVLAVQTLRNNIMASTLLASTAIMLSSIIAVLMTSKNGNHTQS 304
           +NR  WV  MMED SK GVLAVQTLRNNIMAST+LAS AIMLSS+IAVLMT KNG+ +  
Sbjct: 43  LNRRFWVSAMMEDVSKTGVLAVQTLRNNIMASTVLASAAIMLSSVIAVLMTGKNGDRSFG 102

Query: 303 LLYGDESELGFSIKFFAILVCFLLAFLLNVQSIRYYSHASILINVPVNKITSLASKSAHL 124
           +++GD+S +G SIK+FAILVCFLL+FLLNVQSIRYYS ASILINVP  K+  L+  S HL
Sbjct: 103 VVFGDKSPMGISIKYFAILVCFLLSFLLNVQSIRYYSLASILINVPFKKM-YLSPHSHHL 161

Query: 123 TVEYVGKAVNRGSYFWSLGLRAFYFSFPLFLWIFGPIPMFL 1
           T EYVG  VN+GSYFWSLGLRAFYFSFPLFLWIFGPIPMFL
Sbjct: 162 TAEYVGTTVNKGSYFWSLGLRAFYFSFPLFLWIFGPIPMFL 202


>ref|XP_002268419.1| PREDICTED: uncharacterized protein LOC100242299 [Vitis vinifera]
          Length = 239

 Score =  240 bits (613), Expect = 7e-62
 Identities = 122/161 (75%), Positives = 137/161 (85%)
 Frame = -1

Query: 483 INRCIWVQTMMEDSSKNGVLAVQTLRNNIMASTLLASTAIMLSSIIAVLMTSKNGNHTQS 304
           +NR  WV  MMED SK GVLAVQTLRNNIMAST+LAS AIMLSS+IAVLMT KNG+ +  
Sbjct: 43  LNRRFWVSAMMEDVSKTGVLAVQTLRNNIMASTVLASAAIMLSSVIAVLMTGKNGDRSFG 102

Query: 303 LLYGDESELGFSIKFFAILVCFLLAFLLNVQSIRYYSHASILINVPVNKITSLASKSAHL 124
           +++GD+S +G SIK+FAILVCFLL+FLLNVQSIRYYS ASILINVP  K+  L+  S HL
Sbjct: 103 VVFGDKSPMGISIKYFAILVCFLLSFLLNVQSIRYYSLASILINVPFKKM-YLSPHSHHL 161

Query: 123 TVEYVGKAVNRGSYFWSLGLRAFYFSFPLFLWIFGPIPMFL 1
           T EYVG  VN+GSYFWSLGLRAFYFSFPLFLWIFGPIPMFL
Sbjct: 162 TAEYVGTTVNKGSYFWSLGLRAFYFSFPLFLWIFGPIPMFL 202


>ref|XP_002321941.1| predicted protein [Populus trichocarpa] gi|222868937|gb|EEF06068.1|
           predicted protein [Populus trichocarpa]
          Length = 220

 Score =  237 bits (604), Expect = 8e-61
 Identities = 122/162 (75%), Positives = 139/162 (85%), Gaps = 1/162 (0%)
 Frame = -1

Query: 483 INRCIWVQTMMEDSSKNGVLAVQTLRNNIMASTLLASTAIMLSSIIAVLMTSKNGNHT-Q 307
           INR  WV+ MMED SKNGVLAVQTLRNNIMAST+LASTAIMLSS+IAVLMTS +G+ + +
Sbjct: 43  INRRFWVRAMMEDVSKNGVLAVQTLRNNIMASTVLASTAIMLSSLIAVLMTSGSGDKSAR 102

Query: 306 SLLYGDESELGFSIKFFAILVCFLLAFLLNVQSIRYYSHASILINVPVNKITSLASKSAH 127
           + ++GD SELG SIKFF+ILVCFL+AFLLNVQSIRYYSHASILINVP  K+     +  H
Sbjct: 103 NFVFGDRSELGLSIKFFSILVCFLVAFLLNVQSIRYYSHASILINVPFKKMCP-NHRHQH 161

Query: 126 LTVEYVGKAVNRGSYFWSLGLRAFYFSFPLFLWIFGPIPMFL 1
           L+ EYV ++VNRGSYFWSLGLRAFYFSFPL LWIFGPIPM L
Sbjct: 162 LSTEYVARSVNRGSYFWSLGLRAFYFSFPLLLWIFGPIPMLL 203


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