BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032355
         (278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containi...    56   3e-06

>ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Vitis vinifera]
           gi|297735515|emb|CBI17955.3| unnamed protein product
           [Vitis vinifera]
          Length = 627

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 9/98 (9%)
 Frame = -2

Query: 268 SSFTAIVTPLKIAQKGKPSTLFTHPLTLSSS-----ISNTFNETPDL----NIIKCKCKS 116
           SS  + ++  +   + K S+LF HP    S        +T +  PD     N +K  CKS
Sbjct: 9   SSSASAISSSRTTPRCKLSSLFEHPHRPISPGPISLTKDTVSNAPDRGQLENFLKSNCKS 68

Query: 115 GKITLHEAMGFFDSMILLNPFPPVSTFNLVLGALTRIK 2
           G I   EA   F+ +I + P PP+S+FN +LGA+ +IK
Sbjct: 69  GHIKRSEAFSVFNHLIDMQPTPPISSFNTLLGAVAKIK 106