BLASTX nr result

ID: Coptis24_contig00032347 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032347
         (371 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002869009.1| hypothetical protein ARALYDRAFT_490927 [Arab...    63   3e-08
ref|XP_002522363.1| hypothetical protein RCOM_0603420 [Ricinus c...    62   5e-08
ref|XP_003516591.1| PREDICTED: uncharacterized protein LOC100791...    59   5e-07
ref|XP_003611837.1| Cell division cycle-associated 7-like protei...    58   7e-07
ref|NP_001242034.1| uncharacterized protein LOC100811050 [Glycin...    57   2e-06

>ref|XP_002869009.1| hypothetical protein ARALYDRAFT_490927 [Arabidopsis lyrata subsp.
           lyrata] gi|297314845|gb|EFH45268.1| hypothetical protein
           ARALYDRAFT_490927 [Arabidopsis lyrata subsp. lyrata]
          Length = 430

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 37/67 (55%), Positives = 41/67 (61%)
 Frame = -2

Query: 226 MVTLRKRPRTQETPVNPKQTNNSSNEVSGYELCREKRIKENLERMQKLGIFDLSNKLKSG 47
           M  LR R +      NP  T   +  VS YE CRE RIKENL+RMQ LGIFDLS KLKS 
Sbjct: 1   MPALRTRAKCSIPISNPNPTVGGNPNVSMYEKCREDRIKENLQRMQNLGIFDLSLKLKSD 60

Query: 46  VLLPNKR 26
           +  P KR
Sbjct: 61  I-RPAKR 66


>ref|XP_002522363.1| hypothetical protein RCOM_0603420 [Ricinus communis]
           gi|223538441|gb|EEF40047.1| hypothetical protein
           RCOM_0603420 [Ricinus communis]
          Length = 680

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 36/63 (57%), Positives = 43/63 (68%), Gaps = 3/63 (4%)
 Frame = -2

Query: 196 QETPVNPKQTNNSSN---EVSGYELCREKRIKENLERMQKLGIFDLSNKLKSGVLLPNKR 26
           +E  +NPK  NN+     E+S YE  R++RIK NLERMQKLGI DLS KLKS  L   KR
Sbjct: 5   EEPKINPKPLNNNDQTPEEISPYEQSRKERIKANLERMQKLGIVDLSLKLKS--LTSPKR 62

Query: 25  SPR 17
           +PR
Sbjct: 63  TPR 65


>ref|XP_003516591.1| PREDICTED: uncharacterized protein LOC100791534 [Glycine max]
          Length = 372

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 31/58 (53%), Positives = 38/58 (65%)
 Frame = -2

Query: 226 MVTLRKRPRTQETPVNPKQTNNSSNEVSGYELCREKRIKENLERMQKLGIFDLSNKLK 53
           M  LRKR R+ E+   P       +++S YEL RE+RI+EN ERM KLGIFDLS  LK
Sbjct: 1   MPALRKRNRSSESDAMPNNDTPHEHKMSEYELSREQRIRENRERMGKLGIFDLSLTLK 58


>ref|XP_003611837.1| Cell division cycle-associated 7-like protein [Medicago truncatula]
           gi|355513172|gb|AES94795.1| Cell division
           cycle-associated 7-like protein [Medicago truncatula]
          Length = 491

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 34/70 (48%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
 Frame = -2

Query: 226 MVTLRKRPRTQETPVNPKQT-NNSSNEVSGYELCREKRIKENLERMQKLGIFDLSNKLKS 50
           M  L+KR RT+     P  T NN  +++S YEL RE+RI+EN ERM KLGI D+S  LK 
Sbjct: 1   MPPLQKRNRTEIDNPQPAITMNNHQHKISEYELSREERIRENHERMGKLGILDISLSLKL 60

Query: 49  GVLLPNKRSP 20
               P++R+P
Sbjct: 61  KPNPPSRRTP 70


>ref|NP_001242034.1| uncharacterized protein LOC100811050 [Glycine max]
           gi|255644912|gb|ACU22956.1| unknown [Glycine max]
          Length = 210

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 32/65 (49%), Positives = 43/65 (66%), Gaps = 12/65 (18%)
 Frame = -2

Query: 211 KRPRTQETPVNPKQTN------NSSNEVS------GYELCREKRIKENLERMQKLGIFDL 68
           +R + +E P++  + +      NS NE S      GYE  RE+RIKEN+ERMQKLG+FDL
Sbjct: 6   RRKKREEAPLSLSEDDDGDENENSQNEGSKRVKNEGYEQAREQRIKENMERMQKLGLFDL 65

Query: 67  SNKLK 53
           S+KLK
Sbjct: 66  SHKLK 70


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