BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032342
         (273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524067.1| conserved hypothetical protein [Ricinus comm...   111   7e-23
ref|XP_002323381.1| predicted protein [Populus trichocarpa] gi|2...   107   1e-21
ref|XP_004161304.1| PREDICTED: trafficking protein particle comp...   102   2e-20
ref|XP_004136715.1| PREDICTED: trafficking protein particle comp...   102   2e-20
ref|XP_003554472.1| PREDICTED: trafficking protein particle comp...   101   7e-20

>ref|XP_002524067.1| conserved hypothetical protein [Ricinus communis]
           gi|223536635|gb|EEF38277.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1284

 Score =  111 bits (277), Expect = 7e-23
 Identities = 51/68 (75%), Positives = 61/68 (89%)
 Frame = -2

Query: 206 SSSYLGKMLIEEITPVVMVITTPLVEQSCQTNGLSFVQLVQPFCNFDNIDVPVRTASDQP 27
           +S+ LGKML+EEITPVVMV+ TPLVE++C  NGLSFV+++ PFCNF NIDVPVRT+SDQP
Sbjct: 4   ASTPLGKMLMEEITPVVMVLRTPLVEEACIKNGLSFVEMLSPFCNFSNIDVPVRTSSDQP 63

Query: 26  YRLHQFKL 3
           YRLH FKL
Sbjct: 64  YRLHNFKL 71


>ref|XP_002323381.1| predicted protein [Populus trichocarpa] gi|222868011|gb|EEF05142.1|
           predicted protein [Populus trichocarpa]
          Length = 521

 Score =  107 bits (266), Expect = 1e-21
 Identities = 51/73 (69%), Positives = 63/73 (86%)
 Frame = -2

Query: 221 MDAATSSSYLGKMLIEEITPVVMVITTPLVEQSCQTNGLSFVQLVQPFCNFDNIDVPVRT 42
           MD A +S  LGKML+EEITPVVMV+ TPLVE+SC  N LSF++++ PFC+F+NIDVPVRT
Sbjct: 1   MDPAKTS--LGKMLLEEITPVVMVLRTPLVEESCLKNSLSFIEMLSPFCDFNNIDVPVRT 58

Query: 41  ASDQPYRLHQFKL 3
           +SDQPYRL +FKL
Sbjct: 59  SSDQPYRLQKFKL 71


>ref|XP_004161304.1| PREDICTED: trafficking protein particle complex subunit 8-like
           [Cucumis sativus]
          Length = 650

 Score =  102 bits (255), Expect = 2e-20
 Identities = 47/71 (66%), Positives = 60/71 (84%)
 Frame = -2

Query: 221 MDAATSSSYLGKMLIEEITPVVMVITTPLVEQSCQTNGLSFVQLVQPFCNFDNIDVPVRT 42
           MD A +   LGKML+EEITPV+MV+ TPLVE++C  NG SF+Q++ PFC+F+NIDVPVRT
Sbjct: 1   MDPANTP--LGKMLLEEITPVIMVLNTPLVEEACLKNGFSFIQMLSPFCSFNNIDVPVRT 58

Query: 41  ASDQPYRLHQF 9
           ASDQPYR+ +F
Sbjct: 59  ASDQPYRIKKF 69


>ref|XP_004136715.1| PREDICTED: trafficking protein particle complex subunit 8-like
           [Cucumis sativus]
          Length = 1288

 Score =  102 bits (255), Expect = 2e-20
 Identities = 47/71 (66%), Positives = 60/71 (84%)
 Frame = -2

Query: 221 MDAATSSSYLGKMLIEEITPVVMVITTPLVEQSCQTNGLSFVQLVQPFCNFDNIDVPVRT 42
           MD A +   LGKML+EEITPV+MV+ TPLVE++C  NG SF+Q++ PFC+F+NIDVPVRT
Sbjct: 1   MDPANTP--LGKMLLEEITPVIMVLNTPLVEEACLKNGFSFIQMLSPFCSFNNIDVPVRT 58

Query: 41  ASDQPYRLHQF 9
           ASDQPYR+ +F
Sbjct: 59  ASDQPYRIKKF 69


>ref|XP_003554472.1| PREDICTED: trafficking protein particle complex subunit 8-like
           isoform 3 [Glycine max]
          Length = 1257

 Score =  101 bits (251), Expect = 7e-20
 Identities = 46/64 (71%), Positives = 58/64 (90%)
 Frame = -2

Query: 194 LGKMLIEEITPVVMVITTPLVEQSCQTNGLSFVQLVQPFCNFDNIDVPVRTASDQPYRLH 15
           LG+ML+EEITPVVM+++TP VE++   NGLSF+Q + PFC+F+NIDVPVRTASDQPYRLH
Sbjct: 9   LGQMLLEEITPVVMLLSTPSVEEASLKNGLSFLQTLTPFCSFNNIDVPVRTASDQPYRLH 68

Query: 14  QFKL 3
           +FKL
Sbjct: 69  KFKL 72