BLASTX nr result

ID: Coptis24_contig00032335 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032335
         (603 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81672.1| hypothetical protein VITISV_000588 [Vitis vinifera]    62   6e-08
emb|CAN83825.1| hypothetical protein VITISV_043699 [Vitis vinifera]    55   9e-06

>emb|CAN81672.1| hypothetical protein VITISV_000588 [Vitis vinifera]
          Length = 689

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 29/69 (42%), Positives = 44/69 (63%), Gaps = 2/69 (2%)
 Frame = -2

Query: 305 LQNIGFDVFAQ--IDIEKSDRQLVEAIVERWWDSTHTFHFPCGEIGFTPLDFSMLMGLRV 132
           + N GF  F        ++++  V ++ ERWWD+T T HFP GE+G TP DFS++ GLR+
Sbjct: 79  VDNAGFGRFISSLCPSSRAEKVRVISLAERWWDTTGTLHFPFGEVGMTPYDFSVITGLRI 138

Query: 131 GEGKIVAFD 105
           G GK + ++
Sbjct: 139 G-GKPIPYN 146


>emb|CAN83825.1| hypothetical protein VITISV_043699 [Vitis vinifera]
          Length = 1349

 Score = 55.1 bits (131), Expect = 9e-06
 Identities = 27/54 (50%), Positives = 34/54 (62%)
 Frame = -2

Query: 293 GFDVFAQIDIEKSDRQLVEAIVERWWDSTHTFHFPCGEIGFTPLDFSMLMGLRV 132
           GF VF ++   K D  L+ A+VERW   THTFH P GE+  T  D ++L GLRV
Sbjct: 808 GFYVFHRVGHVKVDWPLITALVERWRPETHTFHMPVGEMTITLQDVAILFGLRV 861


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