BLASTX nr result

ID: Coptis24_contig00032301 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032301
         (343 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316629.1| predicted protein [Populus trichocarpa] gi|2...   108   4e-22
ref|XP_002519027.1| lactosylceramide 4-alpha-galactosyltransfera...   105   3e-21
ref|XP_002305683.1| predicted protein [Populus trichocarpa] gi|2...   105   4e-21
ref|XP_004158061.1| PREDICTED: uncharacterized protein At4g19900...   102   3e-20
ref|XP_003635482.1| PREDICTED: uncharacterized protein At4g19900...   100   1e-19

>ref|XP_002316629.1| predicted protein [Populus trichocarpa] gi|222859694|gb|EEE97241.1|
           predicted protein [Populus trichocarpa]
          Length = 308

 Score =  108 bits (270), Expect = 4e-22
 Identities = 50/74 (67%), Positives = 56/74 (75%)
 Frame = +3

Query: 3   GFNFTVLPPLAFYPVGWNRIQSLFHGPIDAVHLRWLTAKLKHIRENSFGVHLWNKQSRRL 182
           GFNFTVLPP AFYPV W+RI+S F GP D VH  WL  KL+ I+  SF VHLWNKQSR +
Sbjct: 223 GFNFTVLPPPAFYPVDWSRIRSFFRGPRDKVHSTWLHEKLEQIKSESFAVHLWNKQSREI 282

Query: 183 KVEKGSILNRIMWD 224
           KVE GSI+N IM D
Sbjct: 283 KVESGSIINYIMLD 296


>ref|XP_002519027.1| lactosylceramide 4-alpha-galactosyltransferase, putative [Ricinus
           communis] gi|223541690|gb|EEF43238.1| lactosylceramide
           4-alpha-galactosyltransferase, putative [Ricinus
           communis]
          Length = 364

 Score =  105 bits (263), Expect = 3e-21
 Identities = 47/74 (63%), Positives = 57/74 (77%)
 Frame = +3

Query: 3   GFNFTVLPPLAFYPVGWNRIQSLFHGPIDAVHLRWLTAKLKHIRENSFGVHLWNKQSRRL 182
           GFNFTVLPP AFYPV W+RI S+F GP D +H +WL  KL+ I+  S  VHLWNKQSR++
Sbjct: 272 GFNFTVLPPSAFYPVNWSRIGSIFRGPRDELHSKWLQRKLEQIKGESLAVHLWNKQSRQI 331

Query: 183 KVEKGSILNRIMWD 224
           KVE GSI+N I+ D
Sbjct: 332 KVENGSIINHIILD 345


>ref|XP_002305683.1| predicted protein [Populus trichocarpa] gi|222848647|gb|EEE86194.1|
           predicted protein [Populus trichocarpa]
          Length = 308

 Score =  105 bits (262), Expect = 4e-21
 Identities = 47/74 (63%), Positives = 55/74 (74%)
 Frame = +3

Query: 3   GFNFTVLPPLAFYPVGWNRIQSLFHGPIDAVHLRWLTAKLKHIRENSFGVHLWNKQSRRL 182
           GFNFTVLPP AFYPV W+RI+SLF GP    H  WL  KL+ I+  SF VHLWN+QSR++
Sbjct: 223 GFNFTVLPPSAFYPVNWSRIKSLFKGPEGKAHSTWLRKKLEQIKSESFAVHLWNRQSRKI 282

Query: 183 KVEKGSILNRIMWD 224
           K E GSI+N IM D
Sbjct: 283 KAESGSIINHIMLD 296


>ref|XP_004158061.1| PREDICTED: uncharacterized protein At4g19900-like [Cucumis sativus]
          Length = 413

 Score =  102 bits (254), Expect = 3e-20
 Identities = 44/71 (61%), Positives = 57/71 (80%)
 Frame = +3

Query: 6   FNFTVLPPLAFYPVGWNRIQSLFHGPIDAVHLRWLTAKLKHIRENSFGVHLWNKQSRRLK 185
           FN T+LPP AFYPV WNRI++ F GP DAVHL+W+ AKL+HI+  S  +HLWN  SR+L+
Sbjct: 339 FNLTILPPSAFYPVVWNRIKTFFQGPKDAVHLKWIIAKLRHIQTKSLALHLWNNHSRKLQ 398

Query: 186 VEKGSILNRIM 218
           VEKGSI++ I+
Sbjct: 399 VEKGSIVDIIV 409


>ref|XP_003635482.1| PREDICTED: uncharacterized protein At4g19900-like [Vitis vinifera]
           gi|296088928|emb|CBI38494.3| unnamed protein product
           [Vitis vinifera]
          Length = 451

 Score =  100 bits (249), Expect = 1e-19
 Identities = 44/74 (59%), Positives = 53/74 (71%)
 Frame = +3

Query: 3   GFNFTVLPPLAFYPVGWNRIQSLFHGPIDAVHLRWLTAKLKHIRENSFGVHLWNKQSRRL 182
           GFNFTVLPP AFYPV W++I S F GP D  H +WL  KL H+R  SF VHLWN+ S  L
Sbjct: 366 GFNFTVLPPPAFYPVDWSKIPSFFKGPRDKPHSKWLAGKLLHVRMQSFAVHLWNRHSNNL 425

Query: 183 KVEKGSILNRIMWD 224
           K EKGSI++ ++ D
Sbjct: 426 KAEKGSIMDHLVSD 439


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