BLASTX nr result

ID: Coptis24_contig00032300 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032300
         (294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002450204.1| hypothetical protein SORBIDRAFT_05g001940 [S...    89   3e-18
ref|XP_002440902.1| hypothetical protein SORBIDRAFT_09g016160 [S...    88   5e-18
ref|XP_002440837.1| hypothetical protein SORBIDRAFT_09g008040 [S...    87   6e-18
ref|XP_002446463.1| hypothetical protein SORBIDRAFT_06g016400 [S...    89   1e-17
ref|XP_002439629.1| hypothetical protein SORBIDRAFT_09g017230 [S...    90   2e-17

>ref|XP_002450204.1| hypothetical protein SORBIDRAFT_05g001940 [Sorghum bicolor]
           gi|241936047|gb|EES09192.1| hypothetical protein
           SORBIDRAFT_05g001940 [Sorghum bicolor]
          Length = 526

 Score = 89.0 bits (219), Expect(3) = 3e-18
 Identities = 44/76 (57%), Positives = 56/76 (73%)
 Frame = -2

Query: 251 GGTGKTYLYSAILVHIRREGEIALAMETSGIAATILPGGRTAHSRFKLLLSPKPNSTCLI 72
           GGTGKT+LY A+L  +R EG IA+A  TSGIAA+ILPGGRTAHSRFK+ +    NSTC  
Sbjct: 93  GGTGKTFLYKALLGRVRSEGLIAIATATSGIAASILPGGRTAHSRFKIPIKLADNSTCTF 152

Query: 71  SKGSDLEELIKKRSVL 24
           +K S   EL++  S++
Sbjct: 153 TKQSGTAELLRMASLV 168



 Score = 25.8 bits (55), Expect(3) = 3e-18
 Identities = 9/12 (75%), Positives = 12/12 (100%)
 Frame = -3

Query: 283 KESRIFFVDGPG 248
           K+S++FFVDGPG
Sbjct: 82  KKSQVFFVDGPG 93



 Score = 21.6 bits (44), Expect(3) = 3e-18
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -1

Query: 39  KKVSVVIWDEITM 1
           +  S+VIWDE+ M
Sbjct: 163 RMASLVIWDEVAM 175


>ref|XP_002440902.1| hypothetical protein SORBIDRAFT_09g016160 [Sorghum bicolor]
            gi|241946187|gb|EES19332.1| hypothetical protein
            SORBIDRAFT_09g016160 [Sorghum bicolor]
          Length = 1379

 Score = 88.2 bits (217), Expect(3) = 5e-18
 Identities = 43/76 (56%), Positives = 56/76 (73%)
 Frame = -2

Query: 251  GGTGKTYLYSAILVHIRREGEIALAMETSGIAATILPGGRTAHSRFKLLLSPKPNSTCLI 72
            GGTGKT+LY A+L  +R +G IA+A  TSGIAA+ILPGGRTAHSRFK+ +    NSTC  
Sbjct: 946  GGTGKTFLYKALLAAVRSKGLIAIATATSGIAASILPGGRTAHSRFKIPIKISSNSTCTF 1005

Query: 71   SKGSDLEELIKKRSVL 24
            S   +  EL+++ S+L
Sbjct: 1006 SIQDETAELLRRASLL 1021



 Score = 25.8 bits (55), Expect(3) = 5e-18
 Identities = 9/12 (75%), Positives = 12/12 (100%)
 Frame = -3

Query: 283 KESRIFFVDGPG 248
           K+S++FFVDGPG
Sbjct: 935 KKSQVFFVDGPG 946



 Score = 21.6 bits (44), Expect(3) = 5e-18
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = -1

Query: 39   KKVSVVIWDEITM 1
            ++ S++IWDE+ M
Sbjct: 1016 RRASLLIWDEVAM 1028


>ref|XP_002440837.1| hypothetical protein SORBIDRAFT_09g008040 [Sorghum bicolor]
            gi|241946122|gb|EES19267.1| hypothetical protein
            SORBIDRAFT_09g008040 [Sorghum bicolor]
          Length = 1679

 Score = 87.0 bits (214), Expect(3) = 6e-18
 Identities = 42/76 (55%), Positives = 56/76 (73%)
 Frame = -2

Query: 251  GGTGKTYLYSAILVHIRREGEIALAMETSGIAATILPGGRTAHSRFKLLLSPKPNSTCLI 72
            GGTGKT+LY A+L  +R +G IA+A  TSGIAA+ILPGGRTAHSRFK+ +    N+ C  
Sbjct: 1246 GGTGKTFLYKALLARVRSKGLIAIATATSGIAASILPGGRTAHSRFKIPIKIGENTMCSF 1305

Query: 71   SKGSDLEELIKKRSVL 24
            SK S   EL+++ S++
Sbjct: 1306 SKQSGTAELLRRASLI 1321



 Score = 25.8 bits (55), Expect(3) = 6e-18
 Identities = 9/12 (75%), Positives = 12/12 (100%)
 Frame = -3

Query: 283  KESRIFFVDGPG 248
            K+S++FFVDGPG
Sbjct: 1235 KKSQVFFVDGPG 1246



 Score = 22.3 bits (46), Expect(3) = 6e-18
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = -1

Query: 39   KKVSVVIWDEITM 1
            ++ S++IWDE+ M
Sbjct: 1316 RRASLIIWDEVAM 1328


>ref|XP_002446463.1| hypothetical protein SORBIDRAFT_06g016400 [Sorghum bicolor]
           gi|241937646|gb|EES10791.1| hypothetical protein
           SORBIDRAFT_06g016400 [Sorghum bicolor]
          Length = 998

 Score = 89.4 bits (220), Expect(2) = 1e-17
 Identities = 43/76 (56%), Positives = 56/76 (73%)
 Frame = -2

Query: 251 GGTGKTYLYSAILVHIRREGEIALAMETSGIAATILPGGRTAHSRFKLLLSPKPNSTCLI 72
           GGTGKT+LY AIL  +R EG I +A  TSGIAA+ILPGGRT+HSRFK+ ++   NSTC  
Sbjct: 564 GGTGKTFLYKAILARVRSEGLIGIATATSGIAASILPGGRTSHSRFKIPITLAENSTCSF 623

Query: 71  SKGSDLEELIKKRSVL 24
            K S   EL+++ S++
Sbjct: 624 GKQSGTAELLRRASLI 639



 Score = 25.4 bits (54), Expect(2) = 1e-17
 Identities = 9/11 (81%), Positives = 11/11 (100%)
 Frame = -3

Query: 280 ESRIFFVDGPG 248
           +SR+FFVDGPG
Sbjct: 554 KSRVFFVDGPG 564


>ref|XP_002439629.1| hypothetical protein SORBIDRAFT_09g017230 [Sorghum bicolor]
           gi|241944914|gb|EES18059.1| hypothetical protein
           SORBIDRAFT_09g017230 [Sorghum bicolor]
          Length = 512

 Score = 90.1 bits (222), Expect(2) = 2e-17
 Identities = 44/76 (57%), Positives = 56/76 (73%)
 Frame = -2

Query: 251 GGTGKTYLYSAILVHIRREGEIALAMETSGIAATILPGGRTAHSRFKLLLSPKPNSTCLI 72
           GGTGKT+LY AIL  +R EG I +A  TSGIAA+ILPGGRTAHSRFK+ ++   NSTC  
Sbjct: 78  GGTGKTFLYKAILARVRSEGLIGIATATSGIAASILPGGRTAHSRFKVPITLAENSTCSF 137

Query: 71  SKGSDLEELIKKRSVL 24
            K S   EL+++ S++
Sbjct: 138 GKQSGTAELLRRASLI 153



 Score = 23.9 bits (50), Expect(2) = 2e-17
 Identities = 8/11 (72%), Positives = 11/11 (100%)
 Frame = -3

Query: 280 ESRIFFVDGPG 248
           +S++FFVDGPG
Sbjct: 68  KSQVFFVDGPG 78


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