BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032296
         (420 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539025.1| PREDICTED: putative pentatricopeptide repeat...    70   2e-10
ref|XP_003631603.1| PREDICTED: putative pentatricopeptide repeat...    64   2e-08
ref|XP_004159175.1| PREDICTED: putative pentatricopeptide repeat...    62   6e-08
ref|XP_004148310.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...    62   6e-08
ref|XP_002306089.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07

>ref|XP_003539025.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g18840-like [Glycine max]
          Length = 681

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 32/53 (60%), Positives = 40/53 (75%)
 Frame = -2

Query: 416 KMRGGEVRKLAGCSWVYIEKTKNIFTSGDRSHSQYEAIYSMLTSLYLVCVKGK 258
           KMRG E +KLAGCSW+Y+E   ++FTSGDRSHS+ EA+YS LT     C+ GK
Sbjct: 614 KMRGHEAKKLAGCSWIYVENGIHVFTSGDRSHSKAEAVYSTLT-----CLNGK 661


>ref|XP_003631603.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g18840-like [Vitis vinifera]
          Length = 670

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 29/45 (64%), Positives = 34/45 (75%)
 Frame = -2

Query: 416 KMRGGEVRKLAGCSWVYIEKTKNIFTSGDRSHSQYEAIYSMLTSL 282
           KMR  E++K AGCSWVY+E   +IFTSGD SHS  EAIYS+L  L
Sbjct: 617 KMRENEIKKFAGCSWVYVENRVHIFTSGDSSHSSAEAIYSILLIL 661


>ref|XP_004159175.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g18840-like [Cucumis sativus]
          Length = 1096

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 28/45 (62%), Positives = 35/45 (77%)
 Frame = -2

Query: 416  KMRGGEVRKLAGCSWVYIEKTKNIFTSGDRSHSQYEAIYSMLTSL 282
            KM+G EV+K AGCSWV++E   ++F SGDR HS+ EAIYS L SL
Sbjct: 1040 KMKGKEVKKNAGCSWVFVESKFHVFISGDRFHSKNEAIYSTLASL 1084


>ref|XP_004148310.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
            repeat-containing protein At3g18840-like [Cucumis
            sativus]
          Length = 1096

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 28/45 (62%), Positives = 35/45 (77%)
 Frame = -2

Query: 416  KMRGGEVRKLAGCSWVYIEKTKNIFTSGDRSHSQYEAIYSMLTSL 282
            KM+G EV+K AGCSWV++E   ++F SGDR HS+ EAIYS L SL
Sbjct: 1040 KMKGKEVKKNAGCSWVFVESKFHVFISGDRFHSKNEAIYSTLASL 1084


>ref|XP_002306089.1| predicted protein [Populus trichocarpa] gi|222849053|gb|EEE86600.1|
           predicted protein [Populus trichocarpa]
          Length = 677

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 26/45 (57%), Positives = 35/45 (77%)
 Frame = -2

Query: 416 KMRGGEVRKLAGCSWVYIEKTKNIFTSGDRSHSQYEAIYSMLTSL 282
           +MRG E +K AGCSWVY++   + FTSGDR+H++ E+IYSML  L
Sbjct: 621 EMRGKEAKKFAGCSWVYLDNEVHSFTSGDRTHTKAESIYSMLEFL 665