BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032293
         (332 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635453.1| PREDICTED: RNA polymerase II C-terminal doma...   124   6e-27
emb|CBI41034.3| unnamed protein product [Vitis vinifera]              124   6e-27
ref|XP_003634864.1| PREDICTED: RNA polymerase II C-terminal doma...   124   6e-27
ref|XP_002324547.1| predicted protein [Populus trichocarpa] gi|2...   123   1e-26
ref|XP_004172979.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymera...   122   2e-26

>ref|XP_003635453.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           4-like [Vitis vinifera]
          Length = 278

 Score =  124 bits (312), Expect = 6e-27
 Identities = 61/89 (68%), Positives = 69/89 (77%)
 Frame = +2

Query: 2   LVFSRVWKTGEIAHNQKLWEMAVQLGATCSTNLDSSVTHVVSTDTGTDKAKWAEQHKKFL 181
           +VFSRV+ T   A N  LW MA QLGATC+T LD SVTHVVSTD GT+K++WA Q KKFL
Sbjct: 190 IVFSRVFPTRFQAENHHLWRMAEQLGATCATELDPSVTHVVSTDAGTEKSRWALQEKKFL 249

Query: 182 VHPRWIEAANYFWKRQSEEKFAVNPVQKK 268
           VHP WIEAANYFW++Q EE F VN  QKK
Sbjct: 250 VHPGWIEAANYFWQKQPEENFPVN--QKK 276


>emb|CBI41034.3| unnamed protein product [Vitis vinifera]
          Length = 264

 Score =  124 bits (312), Expect = 6e-27
 Identities = 61/89 (68%), Positives = 69/89 (77%)
 Frame = +2

Query: 2   LVFSRVWKTGEIAHNQKLWEMAVQLGATCSTNLDSSVTHVVSTDTGTDKAKWAEQHKKFL 181
           +VFSRV+ T   A N  LW MA QLGATC+T LD SVTHVVSTD GT+K++WA Q KKFL
Sbjct: 176 IVFSRVFPTRFQAENHHLWRMAEQLGATCATELDPSVTHVVSTDAGTEKSRWALQEKKFL 235

Query: 182 VHPRWIEAANYFWKRQSEEKFAVNPVQKK 268
           VHP WIEAANYFW++Q EE F VN  QKK
Sbjct: 236 VHPGWIEAANYFWQKQPEENFPVN--QKK 262


>ref|XP_003634864.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           4-like [Vitis vinifera]
          Length = 278

 Score =  124 bits (312), Expect = 6e-27
 Identities = 61/89 (68%), Positives = 69/89 (77%)
 Frame = +2

Query: 2   LVFSRVWKTGEIAHNQKLWEMAVQLGATCSTNLDSSVTHVVSTDTGTDKAKWAEQHKKFL 181
           +VFSRV+ T   A N  LW MA QLGATC+T LD SVTHVVSTD GT+K++WA Q KKFL
Sbjct: 190 IVFSRVFPTRFQAENHHLWRMAEQLGATCATELDPSVTHVVSTDAGTEKSRWALQEKKFL 249

Query: 182 VHPRWIEAANYFWKRQSEEKFAVNPVQKK 268
           VHP WIEAANYFW++Q EE F VN  QKK
Sbjct: 250 VHPGWIEAANYFWQKQPEENFPVN--QKK 276


>ref|XP_002324547.1| predicted protein [Populus trichocarpa] gi|222865981|gb|EEF03112.1|
           predicted protein [Populus trichocarpa]
          Length = 266

 Score =  123 bits (309), Expect = 1e-26
 Identities = 58/87 (66%), Positives = 67/87 (77%)
 Frame = +2

Query: 2   LVFSRVWKTGEIAHNQKLWEMAVQLGATCSTNLDSSVTHVVSTDTGTDKAKWAEQHKKFL 181
           +VFSRV+ T   A N  LW MA QLGATCST LD SVTHVVS D+GT+K+ WA +H KFL
Sbjct: 179 IVFSRVFPTQSQADNHHLWRMAEQLGATCSTELDPSVTHVVSKDSGTEKSHWALKHNKFL 238

Query: 182 VHPRWIEAANYFWKRQSEEKFAVNPVQ 262
           V P WIEAANYFW+RQ EE FAVN ++
Sbjct: 239 VQPGWIEAANYFWQRQPEENFAVNQIK 265


>ref|XP_004172979.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase II C-terminal domain
           phosphatase-like 4-like, partial [Cucumis sativus]
          Length = 340

 Score =  122 bits (307), Expect = 2e-26
 Identities = 56/83 (67%), Positives = 66/83 (79%)
 Frame = +2

Query: 2   LVFSRVWKTGEIAHNQKLWEMAVQLGATCSTNLDSSVTHVVSTDTGTDKAKWAEQHKKFL 181
           +VFSRV+ T   A N +LW+M  QLG TCST LD SVTHVV+TD GT+K++WA + KKFL
Sbjct: 247 VVFSRVFPTKFQAENHQLWKMVEQLGGTCSTELDQSVTHVVATDAGTEKSRWALKEKKFL 306

Query: 182 VHPRWIEAANYFWKRQSEEKFAV 250
           VHPRWIEA+NYFWKRQ EE F V
Sbjct: 307 VHPRWIEASNYFWKRQMEENFTV 329