BLASTX nr result
ID: Coptis24_contig00032285
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00032285 (469 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002266701.1| PREDICTED: uncharacterized protein LOC100262... 71 3e-14 emb|CBI31915.3| unnamed protein product [Vitis vinifera] 71 3e-14 emb|CAN71255.1| hypothetical protein VITISV_043222 [Vitis vinifera] 70 2e-13 ref|XP_002863334.1| hypothetical protein ARALYDRAFT_494215 [Arab... 68 3e-13 ref|NP_199569.1| uncharacterized protein [Arabidopsis thaliana] ... 67 6e-13 >ref|XP_002266701.1| PREDICTED: uncharacterized protein LOC100262529 [Vitis vinifera] Length = 754 Score = 70.9 bits (172), Expect(2) = 3e-14 Identities = 32/67 (47%), Positives = 47/67 (70%), Gaps = 1/67 (1%) Frame = +3 Query: 108 GC-IKGKLDVSKYSSPVPVIGLYIAAGS*VCLLFMLGDIIAAVRHKKGWIPCRLFSLNSV 284 GC I G ++ S ++ P+P IG+Y+AA S VC L M D A+RHKK W PC+ FSLN+ Sbjct: 5 GCNIDGSVNDSNFNEPMPWIGIYVAAASLVCSLAMGADAFLALRHKKFWFPCKFFSLNAT 64 Query: 285 ALTLLSI 305 +LT++++ Sbjct: 65 SLTIIAV 71 Score = 32.0 bits (71), Expect(2) = 3e-14 Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 2/38 (5%) Frame = +1 Query: 310 KISSGLNNA--HAKDQLSKLTGTAFICISIGFLNPSIG 417 K+S LN + +DQLSKL+ T +C +G PSIG Sbjct: 74 KLSVDLNTSMPRCQDQLSKLSSTVMMCTVMGNFMPSIG 111 >emb|CBI31915.3| unnamed protein product [Vitis vinifera] Length = 695 Score = 70.9 bits (172), Expect(2) = 3e-14 Identities = 32/67 (47%), Positives = 47/67 (70%), Gaps = 1/67 (1%) Frame = +3 Query: 108 GC-IKGKLDVSKYSSPVPVIGLYIAAGS*VCLLFMLGDIIAAVRHKKGWIPCRLFSLNSV 284 GC I G ++ S ++ P+P IG+Y+AA S VC L M D A+RHKK W PC+ FSLN+ Sbjct: 5 GCNIDGSVNDSNFNEPMPWIGIYVAAASLVCSLAMGADAFLALRHKKFWFPCKFFSLNAT 64 Query: 285 ALTLLSI 305 +LT++++ Sbjct: 65 SLTIIAV 71 Score = 32.0 bits (71), Expect(2) = 3e-14 Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 2/38 (5%) Frame = +1 Query: 310 KISSGLNNA--HAKDQLSKLTGTAFICISIGFLNPSIG 417 K+S LN + +DQLSKL+ T +C +G PSIG Sbjct: 74 KLSVDLNTSMPRCQDQLSKLSSTVMMCTVMGNFMPSIG 111 >emb|CAN71255.1| hypothetical protein VITISV_043222 [Vitis vinifera] Length = 287 Score = 70.5 bits (171), Expect(2) = 2e-13 Identities = 33/81 (40%), Positives = 53/81 (65%), Gaps = 1/81 (1%) Frame = +3 Query: 75 RADQEERKMANGC-IKGKLDVSKYSSPVPVIGLYIAAGS*VCLLFMLGDIIAAVRHKKGW 251 R++ +++ + GC I G ++ S ++ P+P IG+Y+AA S VC L M D A RH K W Sbjct: 26 RSEGKKKMVWQGCSIHGSVNDSNFNEPMPWIGIYVAAASLVCSLAMGADAFLAFRHTKFW 85 Query: 252 IPCRLFSLNSVALTLLSIWQN 314 PC++FSLN +LT++++ N Sbjct: 86 FPCKVFSLNVTSLTIIAVATN 106 Score = 30.0 bits (66), Expect(2) = 2e-13 Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 2/37 (5%) Frame = +1 Query: 313 ISSGLNNA--HAKDQLSKLTGTAFICISIGFLNPSIG 417 +S LN + +DQLSKL+ T +C +G PSIG Sbjct: 107 LSVDLNTSMPRCQDQLSKLSSTVLMCTVMGNFMPSIG 143 >ref|XP_002863334.1| hypothetical protein ARALYDRAFT_494215 [Arabidopsis lyrata subsp. lyrata] gi|297309169|gb|EFH39593.1| hypothetical protein ARALYDRAFT_494215 [Arabidopsis lyrata subsp. lyrata] Length = 748 Score = 68.2 bits (165), Expect(2) = 3e-13 Identities = 29/67 (43%), Positives = 46/67 (68%), Gaps = 1/67 (1%) Frame = +3 Query: 108 GC-IKGKLDVSKYSSPVPVIGLYIAAGS*VCLLFMLGDIIAAVRHKKGWIPCRLFSLNSV 284 GC G L+ +++S P+P+IG+Y+A S +C L M D+I RH+K W PC+ FSLN+ Sbjct: 5 GCDAHGDLNDAEFSKPLPLIGIYVAVASLICGLAMAADLIHGFRHRKFWFPCKFFSLNAT 64 Query: 285 ALTLLSI 305 +LT +++ Sbjct: 65 SLTFIAV 71 Score = 31.6 bits (70), Expect(2) = 3e-13 Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 2/38 (5%) Frame = +1 Query: 310 KISSGLNNA--HAKDQLSKLTGTAFICISIGFLNPSIG 417 K+S LN + +DQL+KL+ T F+C +G PS+G Sbjct: 74 KLSVDLNTSMPSRQDQLAKLSSTVFVCTVMGNSMPSLG 111 >ref|NP_199569.1| uncharacterized protein [Arabidopsis thaliana] gi|9758786|dbj|BAB09084.1| unnamed protein product [Arabidopsis thaliana] gi|16974605|gb|AAL31205.1| AT5g47580/MNJ7_17 [Arabidopsis thaliana] gi|23506171|gb|AAN31097.1| At5g47580/MNJ7_17 [Arabidopsis thaliana] gi|332008151|gb|AED95534.1| uncharacterized protein [Arabidopsis thaliana] Length = 748 Score = 67.0 bits (162), Expect(2) = 6e-13 Identities = 29/67 (43%), Positives = 45/67 (67%), Gaps = 1/67 (1%) Frame = +3 Query: 108 GC-IKGKLDVSKYSSPVPVIGLYIAAGS*VCLLFMLGDIIAAVRHKKGWIPCRLFSLNSV 284 GC G L+ +++S P+P IG+Y+A S +C L M D+I RH+K W PC+ FSLN+ Sbjct: 5 GCDAHGDLNDAEFSKPLPSIGIYVAVASLICGLAMAADLIHGFRHRKFWFPCKFFSLNAT 64 Query: 285 ALTLLSI 305 +LT +++ Sbjct: 65 SLTFIAV 71 Score = 31.6 bits (70), Expect(2) = 6e-13 Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 2/38 (5%) Frame = +1 Query: 310 KISSGLNNA--HAKDQLSKLTGTAFICISIGFLNPSIG 417 K+S LN + +DQL+KL+ T F+C +G PS+G Sbjct: 74 KLSVDLNTSMPSRQDQLAKLSSTVFVCTVMGNSMPSLG 111