BLASTX nr result

ID: Coptis24_contig00032285 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032285
         (469 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266701.1| PREDICTED: uncharacterized protein LOC100262...    71   3e-14
emb|CBI31915.3| unnamed protein product [Vitis vinifera]               71   3e-14
emb|CAN71255.1| hypothetical protein VITISV_043222 [Vitis vinifera]    70   2e-13
ref|XP_002863334.1| hypothetical protein ARALYDRAFT_494215 [Arab...    68   3e-13
ref|NP_199569.1| uncharacterized protein [Arabidopsis thaliana] ...    67   6e-13

>ref|XP_002266701.1| PREDICTED: uncharacterized protein LOC100262529 [Vitis vinifera]
          Length = 754

 Score = 70.9 bits (172), Expect(2) = 3e-14
 Identities = 32/67 (47%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
 Frame = +3

Query: 108 GC-IKGKLDVSKYSSPVPVIGLYIAAGS*VCLLFMLGDIIAAVRHKKGWIPCRLFSLNSV 284
           GC I G ++ S ++ P+P IG+Y+AA S VC L M  D   A+RHKK W PC+ FSLN+ 
Sbjct: 5   GCNIDGSVNDSNFNEPMPWIGIYVAAASLVCSLAMGADAFLALRHKKFWFPCKFFSLNAT 64

Query: 285 ALTLLSI 305
           +LT++++
Sbjct: 65  SLTIIAV 71



 Score = 32.0 bits (71), Expect(2) = 3e-14
 Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
 Frame = +1

Query: 310 KISSGLNNA--HAKDQLSKLTGTAFICISIGFLNPSIG 417
           K+S  LN +    +DQLSKL+ T  +C  +G   PSIG
Sbjct: 74  KLSVDLNTSMPRCQDQLSKLSSTVMMCTVMGNFMPSIG 111


>emb|CBI31915.3| unnamed protein product [Vitis vinifera]
          Length = 695

 Score = 70.9 bits (172), Expect(2) = 3e-14
 Identities = 32/67 (47%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
 Frame = +3

Query: 108 GC-IKGKLDVSKYSSPVPVIGLYIAAGS*VCLLFMLGDIIAAVRHKKGWIPCRLFSLNSV 284
           GC I G ++ S ++ P+P IG+Y+AA S VC L M  D   A+RHKK W PC+ FSLN+ 
Sbjct: 5   GCNIDGSVNDSNFNEPMPWIGIYVAAASLVCSLAMGADAFLALRHKKFWFPCKFFSLNAT 64

Query: 285 ALTLLSI 305
           +LT++++
Sbjct: 65  SLTIIAV 71



 Score = 32.0 bits (71), Expect(2) = 3e-14
 Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
 Frame = +1

Query: 310 KISSGLNNA--HAKDQLSKLTGTAFICISIGFLNPSIG 417
           K+S  LN +    +DQLSKL+ T  +C  +G   PSIG
Sbjct: 74  KLSVDLNTSMPRCQDQLSKLSSTVMMCTVMGNFMPSIG 111


>emb|CAN71255.1| hypothetical protein VITISV_043222 [Vitis vinifera]
          Length = 287

 Score = 70.5 bits (171), Expect(2) = 2e-13
 Identities = 33/81 (40%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
 Frame = +3

Query: 75  RADQEERKMANGC-IKGKLDVSKYSSPVPVIGLYIAAGS*VCLLFMLGDIIAAVRHKKGW 251
           R++ +++ +  GC I G ++ S ++ P+P IG+Y+AA S VC L M  D   A RH K W
Sbjct: 26  RSEGKKKMVWQGCSIHGSVNDSNFNEPMPWIGIYVAAASLVCSLAMGADAFLAFRHTKFW 85

Query: 252 IPCRLFSLNSVALTLLSIWQN 314
            PC++FSLN  +LT++++  N
Sbjct: 86  FPCKVFSLNVTSLTIIAVATN 106



 Score = 30.0 bits (66), Expect(2) = 2e-13
 Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
 Frame = +1

Query: 313 ISSGLNNA--HAKDQLSKLTGTAFICISIGFLNPSIG 417
           +S  LN +    +DQLSKL+ T  +C  +G   PSIG
Sbjct: 107 LSVDLNTSMPRCQDQLSKLSSTVLMCTVMGNFMPSIG 143


>ref|XP_002863334.1| hypothetical protein ARALYDRAFT_494215 [Arabidopsis lyrata subsp.
           lyrata] gi|297309169|gb|EFH39593.1| hypothetical protein
           ARALYDRAFT_494215 [Arabidopsis lyrata subsp. lyrata]
          Length = 748

 Score = 68.2 bits (165), Expect(2) = 3e-13
 Identities = 29/67 (43%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
 Frame = +3

Query: 108 GC-IKGKLDVSKYSSPVPVIGLYIAAGS*VCLLFMLGDIIAAVRHKKGWIPCRLFSLNSV 284
           GC   G L+ +++S P+P+IG+Y+A  S +C L M  D+I   RH+K W PC+ FSLN+ 
Sbjct: 5   GCDAHGDLNDAEFSKPLPLIGIYVAVASLICGLAMAADLIHGFRHRKFWFPCKFFSLNAT 64

Query: 285 ALTLLSI 305
           +LT +++
Sbjct: 65  SLTFIAV 71



 Score = 31.6 bits (70), Expect(2) = 3e-13
 Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
 Frame = +1

Query: 310 KISSGLNNA--HAKDQLSKLTGTAFICISIGFLNPSIG 417
           K+S  LN +    +DQL+KL+ T F+C  +G   PS+G
Sbjct: 74  KLSVDLNTSMPSRQDQLAKLSSTVFVCTVMGNSMPSLG 111


>ref|NP_199569.1| uncharacterized protein [Arabidopsis thaliana]
           gi|9758786|dbj|BAB09084.1| unnamed protein product
           [Arabidopsis thaliana] gi|16974605|gb|AAL31205.1|
           AT5g47580/MNJ7_17 [Arabidopsis thaliana]
           gi|23506171|gb|AAN31097.1| At5g47580/MNJ7_17
           [Arabidopsis thaliana] gi|332008151|gb|AED95534.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 748

 Score = 67.0 bits (162), Expect(2) = 6e-13
 Identities = 29/67 (43%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
 Frame = +3

Query: 108 GC-IKGKLDVSKYSSPVPVIGLYIAAGS*VCLLFMLGDIIAAVRHKKGWIPCRLFSLNSV 284
           GC   G L+ +++S P+P IG+Y+A  S +C L M  D+I   RH+K W PC+ FSLN+ 
Sbjct: 5   GCDAHGDLNDAEFSKPLPSIGIYVAVASLICGLAMAADLIHGFRHRKFWFPCKFFSLNAT 64

Query: 285 ALTLLSI 305
           +LT +++
Sbjct: 65  SLTFIAV 71



 Score = 31.6 bits (70), Expect(2) = 6e-13
 Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
 Frame = +1

Query: 310 KISSGLNNA--HAKDQLSKLTGTAFICISIGFLNPSIG 417
           K+S  LN +    +DQL+KL+ T F+C  +G   PS+G
Sbjct: 74  KLSVDLNTSMPSRQDQLAKLSSTVFVCTVMGNSMPSLG 111


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