BLASTX nr result

ID: Coptis24_contig00032283 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032283
         (578 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301549.1| predicted protein [Populus trichocarpa] gi|2...   123   3e-26
ref|XP_004140476.1| PREDICTED: uncharacterized protein LOC101221...   115   5e-24
ref|XP_002325573.1| predicted protein [Populus trichocarpa] gi|2...   111   1e-22
emb|CAN79321.1| hypothetical protein VITISV_018984 [Vitis vinifera]   108   5e-22
emb|CAN79389.1| hypothetical protein VITISV_004909 [Vitis vinifera]   106   2e-21

>ref|XP_002301549.1| predicted protein [Populus trichocarpa] gi|222843275|gb|EEE80822.1|
           predicted protein [Populus trichocarpa]
          Length = 221

 Score =  123 bits (308), Expect = 3e-26
 Identities = 61/134 (45%), Positives = 90/134 (67%), Gaps = 1/134 (0%)
 Frame = +1

Query: 1   MEVPDSSKVKLVAFKLKGGAAAWWEKLCEDRSKYD*APILTWERMRKLIREKFLPRDYKQ 180
           ME+P+  KVKLVA++L GGA+AWWE+L   R +     + TW +MR+L+R K+LP DY+Q
Sbjct: 1   MEIPEDKKVKLVAYRLMGGASAWWEQLQLTRMRQRKGMVQTWAKMRRLLRAKYLPLDYEQ 60

Query: 181 QLFAKIQNCQQGTKLVEEYVSEFYNLVARNQLNESEEQLVSRFTEGLNRLIQFGMTSAT- 357
            LF + Q+C+QG + V+ YV EF+ L +RN L+E++ Q VSRF  GL   +Q  ++  T 
Sbjct: 61  ILFQQYQDCRQGNRTVQTYVEEFHRLSSRNNLSETDAQQVSRFVGGLCLTVQDRVSMQTI 120

Query: 358 YTMVKAIQQALAVE 399
           Y++ +AI  A   E
Sbjct: 121 YSLTEAINLATKAE 134


>ref|XP_004140476.1| PREDICTED: uncharacterized protein LOC101221994 [Cucumis sativus]
          Length = 1544

 Score =  115 bits (288), Expect = 5e-24
 Identities = 54/139 (38%), Positives = 88/139 (63%), Gaps = 7/139 (5%)
 Frame = +1

Query: 1   MEVPDSSKVKLVAFKLKGGAAAWWEKLCEDRSKYD*APILTWERMRKLIREKFLPRDYKQ 180
           M+ P+  KV LVA KL+ GA+AWW++L  +R +    P+ +WE+M+KL++ +FLP +Y+Q
Sbjct: 272 MDTPERKKVHLVALKLRAGASAWWDQLEINRQRCGKQPVRSWEKMKKLLKARFLPPNYEQ 331

Query: 181 QLFAKIQNCQQGTKLVEEYVSEFYNLVARNQLNESEEQLVSRFTEGLN-------RLIQF 339
            L+ + QNC+QG + V EY+ EF+ L AR  L+E+E+  V+RF  GL        RL  F
Sbjct: 332 TLYNQYQNCRQGVRTVAEYIEEFHRLSARTNLSENEQHQVARFVGGLRFDIKEKVRLQPF 391

Query: 340 GMTSATYTMVKAIQQALAV 396
              S   +  + +++ +A+
Sbjct: 392 RFLSEAISFAETVEEMIAI 410


>ref|XP_002325573.1| predicted protein [Populus trichocarpa] gi|222862448|gb|EEE99954.1|
           predicted protein [Populus trichocarpa]
          Length = 261

 Score =  111 bits (277), Expect = 1e-22
 Identities = 52/112 (46%), Positives = 77/112 (68%)
 Frame = +1

Query: 1   MEVPDSSKVKLVAFKLKGGAAAWWEKLCEDRSKYD*APILTWERMRKLIREKFLPRDYKQ 180
           ME+P+  K+KLVA++L  GA+AWWE+L   R +     + TW +MR+L+R ++LP DY+Q
Sbjct: 145 MEIPEDKKIKLVAYRLMEGASAWWEQLQLKRMRQRKGMVQTWAKMRRLLRARYLPPDYEQ 204

Query: 181 QLFAKIQNCQQGTKLVEEYVSEFYNLVARNQLNESEEQLVSRFTEGLNRLIQ 336
            LF + Q+ +QG + V+ YV EF+ L +RN L+E++ Q VSRF  GL   IQ
Sbjct: 205 ILFQQYQDYRQGNRTVQTYVEEFHRLSSRNNLSETDAQQVSRFVGGLRLAIQ 256


>emb|CAN79321.1| hypothetical protein VITISV_018984 [Vitis vinifera]
          Length = 1521

 Score =  108 bits (271), Expect = 5e-22
 Identities = 56/132 (42%), Positives = 80/132 (60%), Gaps = 1/132 (0%)
 Frame = +1

Query: 7   VPDSSKVKLVAFKLKGGAAAWWEKLCEDRSKYD*APILTWERMRKLIREKFLPRDYKQQL 186
           +P++ KV+ V  KLKG A  WW  +     +    PI TW+ M+  ++E FLP DY+Q +
Sbjct: 120 MPENRKVRFVKAKLKGAARLWWHNIENQAHRTGQPPIDTWDEMKLKMKEHFLPTDYEQLM 179

Query: 187 FAKIQNCQQGTKLVEEYVSEFYNLVARNQLNESEEQLVSRFTEGLNRLIQFGMTSA-TYT 363
           + K+ + +QGTK VEEY  EF+ L  RNQ+ ES+ QL +R+  GL   IQ  M +A TYT
Sbjct: 180 YTKLFSLKQGTKSVEEYTEEFHELSIRNQVXESDAQLAARYKAGLRMEIQLEMIAAHTYT 239

Query: 364 MVKAIQQALAVE 399
           +    Q AL +E
Sbjct: 240 VDDVYQLALKIE 251


>emb|CAN79389.1| hypothetical protein VITISV_004909 [Vitis vinifera]
          Length = 895

 Score =  106 bits (265), Expect = 2e-21
 Identities = 55/135 (40%), Positives = 80/135 (59%), Gaps = 1/135 (0%)
 Frame = +1

Query: 7   VPDSSKVKLVAFKLKGGAAAWWEKLCEDRSKYD*APILTWERMRKLIREKFLPRDYKQQL 186
           +P++ KV+ V  KLKG A  WW  +     +    PI TW+ M+  ++E FLP DY+Q +
Sbjct: 1   MPENRKVRFVKAKLKGAARLWWHNIENQAHRTGQPPIDTWDEMKLKMKEHFLPTDYEQLM 60

Query: 187 FAKIQNCQQGTKLVEEYVSEFYNLVARNQLNESEEQLVSRFTEGLNRLIQFGMTSA-TYT 363
           + K+ + +QGTK VEEY  EF+ L  RNQ+ ES+ QL +R+  GL   IQ  M +  TYT
Sbjct: 61  YTKLFSLKQGTKSVEEYTEEFHELSIRNQVRESDAQLAARYKAGLRMEIQLEMIATHTYT 120

Query: 364 MVKAIQQALAVERCI 408
           +    Q AL ++  I
Sbjct: 121 VDDVYQLALKIKEGI 135


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