BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032277
         (680 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635608.1| PREDICTED: pentatricopeptide repeat-containi...   201   8e-50
emb|CAN70653.1| hypothetical protein VITISV_010023 [Vitis vinifera]   201   1e-49
ref|XP_003632478.1| PREDICTED: pentatricopeptide repeat-containi...   200   2e-49
emb|CBI33142.3| unnamed protein product [Vitis vinifera]              200   2e-49
ref|XP_003532816.1| PREDICTED: pentatricopeptide repeat-containi...   189   3e-46

>ref|XP_003635608.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
           mitochondrial-like, partial [Vitis vinifera]
          Length = 317

 Score =  201 bits (512), Expect = 8e-50
 Identities = 96/156 (61%), Positives = 121/156 (77%), Gaps = 1/156 (0%)
 Frame = +2

Query: 2   FESNLSVCNALITMYNKGGSIPDAEVVFQQVDSPDLVSWNTIIAGYAHHGHYDRALSSFD 181
           +ES++S+CNALITMY K GSI D+E+ F+Q+D PD+VSWN +IA +A HG YDRAL+SF 
Sbjct: 57  YESHISICNALITMYCKCGSILDSELAFRQIDHPDVVSWNAMIAAFARHGFYDRALASFG 116

Query: 182 EMGLNGLKPDGITFLNILTACGHAGKVKESMDWFGIMANDHGIALRAEHYACMVDILCRA 361
           EM  N ++PDGITFL++L+ACGHAGKV ES++WF  M   + I  R EH+AC+VDIL R 
Sbjct: 117 EMRSNRVEPDGITFLSLLSACGHAGKVHESLNWFNSMIKSYKIVARPEHFACLVDILSRG 176

Query: 362 GQLEKACMIILGMPFEADAGVWGALLAP-RVHFDSK 466
           GQ+EKA  II  MPFEAD G+WGALLA   VH + K
Sbjct: 177 GQVEKAYKIIQEMPFEADCGIWGALLAACHVHLNVK 212


>emb|CAN70653.1| hypothetical protein VITISV_010023 [Vitis vinifera]
          Length = 1301

 Score =  201 bits (510), Expect = 1e-49
 Identities = 96/156 (61%), Positives = 120/156 (76%), Gaps = 1/156 (0%)
 Frame = +2

Query: 2   FESNLSVCNALITMYNKGGSIPDAEVVFQQVDSPDLVSWNTIIAGYAHHGHYDRALSSFD 181
           +ES +S+CNALITMY K GSI D+E+ F+Q+D PD+VSWN +IA +A HG YDRAL+SF 
Sbjct: 330 YESRISICNALITMYCKCGSILDSELAFRQIDHPDVVSWNAMIAAFARHGFYDRALASFG 389

Query: 182 EMGLNGLKPDGITFLNILTACGHAGKVKESMDWFGIMANDHGIALRAEHYACMVDILCRA 361
           EM  N ++PDGITFL++L+ACGHAGKV ES++WF  M   + I  R EH+AC+VDIL R 
Sbjct: 390 EMRSNRVEPDGITFLSLLSACGHAGKVHESLNWFNSMIXSYKIVXRPEHFACLVDILSRG 449

Query: 362 GQLEKACMIILGMPFEADAGVWGALLAP-RVHFDSK 466
           GQ+EKA  II  MPFEAD G+WGALLA   VH + K
Sbjct: 450 GQVEKAYKIIQEMPFEADCGIWGALLAACHVHLNVK 485



 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 40/146 (27%), Positives = 70/146 (47%)
 Frame = +2

Query: 5   ESNLSVCNALITMYNKGGSIPDAEVVFQQVDSPDLVSWNTIIAGYAHHGHYDRALSSFDE 184
           + N+    A+IT Y K G    A+++F Q+   DL SWN +I GYA +G  + AL    +
Sbjct: 230 DKNIVAMTAMITGYCKEGKTDKAKILFDQIPCRDLASWNAMITGYAQNGSGEEALKLHSQ 289

Query: 185 MGLNGLKPDGITFLNILTACGHAGKVKESMDWFGIMANDHGIALRAEHYACMVDILCRAG 364
           M   G++PD  T +++LTAC     ++E      ++    G   R      ++ + C+ G
Sbjct: 290 MLKMGMQPDHSTLISVLTACSSLASLQEGRKTH-VLVLKSGYESRISICNALITMYCKCG 348

Query: 365 QLEKACMIILGMPFEADAGVWGALLA 442
            +  + +    +    D   W A++A
Sbjct: 349 SILDSELAFRQID-HPDVVSWNAMIA 373


>ref|XP_003632478.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Vitis vinifera]
          Length = 590

 Score =  200 bits (509), Expect = 2e-49
 Identities = 96/156 (61%), Positives = 120/156 (76%), Gaps = 1/156 (0%)
 Frame = +2

Query: 2   FESNLSVCNALITMYNKGGSIPDAEVVFQQVDSPDLVSWNTIIAGYAHHGHYDRALSSFD 181
           +ES +S+CNALITMY K GSI D+E+ F+Q+D PD+VSWN +IA +A HG YDRAL+SF 
Sbjct: 330 YESRISICNALITMYCKCGSILDSELAFRQIDHPDVVSWNAMIAAFARHGFYDRALASFG 389

Query: 182 EMGLNGLKPDGITFLNILTACGHAGKVKESMDWFGIMANDHGIALRAEHYACMVDILCRA 361
           EM  N ++PDGITFL++L+ACGHAGKV ES++WF  M   + I  R EH+AC+VDIL R 
Sbjct: 390 EMRSNRVEPDGITFLSLLSACGHAGKVHESLNWFNSMIESYKIVPRPEHFACLVDILSRG 449

Query: 362 GQLEKACMIILGMPFEADAGVWGALLAP-RVHFDSK 466
           GQ+EKA  II  MPFEAD G+WGALLA   VH + K
Sbjct: 450 GQVEKAYKIIQEMPFEADCGIWGALLAACHVHLNVK 485



 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 40/146 (27%), Positives = 70/146 (47%)
 Frame = +2

Query: 5   ESNLSVCNALITMYNKGGSIPDAEVVFQQVDSPDLVSWNTIIAGYAHHGHYDRALSSFDE 184
           + N+    A+IT Y K G    A+++F Q+   DL SWN +I GYA +G  + AL    +
Sbjct: 230 DKNIVAMTAMITGYCKEGKTDKAKILFDQIPCRDLASWNAMITGYAQNGSGEEALKLHSQ 289

Query: 185 MGLNGLKPDGITFLNILTACGHAGKVKESMDWFGIMANDHGIALRAEHYACMVDILCRAG 364
           M   G++PD  T +++LTAC     ++E      ++    G   R      ++ + C+ G
Sbjct: 290 MLKMGMQPDHSTLISVLTACSSLASLQEGRKTH-VLVLKSGYESRISICNALITMYCKCG 348

Query: 365 QLEKACMIILGMPFEADAGVWGALLA 442
            +  + +    +    D   W A++A
Sbjct: 349 SILDSELAFRQID-HPDVVSWNAMIA 373


>emb|CBI33142.3| unnamed protein product [Vitis vinifera]
          Length = 1198

 Score =  200 bits (509), Expect = 2e-49
 Identities = 96/156 (61%), Positives = 120/156 (76%), Gaps = 1/156 (0%)
 Frame = +2

Query: 2   FESNLSVCNALITMYNKGGSIPDAEVVFQQVDSPDLVSWNTIIAGYAHHGHYDRALSSFD 181
           +ES +S+CNALITMY K GSI D+E+ F+Q+D PD+VSWN +IA +A HG YDRAL+SF 
Sbjct: 258 YESRISICNALITMYCKCGSILDSELAFRQIDHPDVVSWNAMIAAFARHGFYDRALASFG 317

Query: 182 EMGLNGLKPDGITFLNILTACGHAGKVKESMDWFGIMANDHGIALRAEHYACMVDILCRA 361
           EM  N ++PDGITFL++L+ACGHAGKV ES++WF  M   + I  R EH+AC+VDIL R 
Sbjct: 318 EMRSNRVEPDGITFLSLLSACGHAGKVHESLNWFNSMIESYKIVPRPEHFACLVDILSRG 377

Query: 362 GQLEKACMIILGMPFEADAGVWGALLAP-RVHFDSK 466
           GQ+EKA  II  MPFEAD G+WGALLA   VH + K
Sbjct: 378 GQVEKAYKIIQEMPFEADCGIWGALLAACHVHLNVK 413



 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 40/146 (27%), Positives = 70/146 (47%)
 Frame = +2

Query: 5   ESNLSVCNALITMYNKGGSIPDAEVVFQQVDSPDLVSWNTIIAGYAHHGHYDRALSSFDE 184
           + N+    A+IT Y K G    A+++F Q+   DL SWN +I GYA +G  + AL    +
Sbjct: 158 DKNIVAMTAMITGYCKEGKTDKAKILFDQIPCRDLASWNAMITGYAQNGSGEEALKLHSQ 217

Query: 185 MGLNGLKPDGITFLNILTACGHAGKVKESMDWFGIMANDHGIALRAEHYACMVDILCRAG 364
           M   G++PD  T +++LTAC     ++E      ++    G   R      ++ + C+ G
Sbjct: 218 MLKMGMQPDHSTLISVLTACSSLASLQEGRKTH-VLVLKSGYESRISICNALITMYCKCG 276

Query: 365 QLEKACMIILGMPFEADAGVWGALLA 442
            +  + +    +    D   W A++A
Sbjct: 277 SILDSELAFRQID-HPDVVSWNAMIA 301


>ref|XP_003532816.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 579

 Score =  189 bits (481), Expect = 3e-46
 Identities = 88/147 (59%), Positives = 119/147 (80%)
 Frame = +2

Query: 2   FESNLSVCNALITMYNKGGSIPDAEVVFQQVDSPDLVSWNTIIAGYAHHGHYDRALSSFD 181
           F+S+LSVCNALIT+++K G I D+E+VF Q+  PDLVSWNTIIA +A HG YD+A S FD
Sbjct: 313 FDSDLSVCNALITVHSKCGGIVDSELVFGQISHPDLVSWNTIIAAFAQHGLYDKARSYFD 372

Query: 182 EMGLNGLKPDGITFLNILTACGHAGKVKESMDWFGIMANDHGIALRAEHYACMVDILCRA 361
           +M    ++PDGITFL++L+AC  AGKV ESM+ F +M +++GI  R+EHYAC+VD++ RA
Sbjct: 373 QMVTVSVQPDGITFLSLLSACCRAGKVNESMNLFSLMVDNYGIPPRSEHYACLVDVMSRA 432

Query: 362 GQLEKACMIILGMPFEADAGVWGALLA 442
           GQL++AC II  MPF+AD+ +WGA+LA
Sbjct: 433 GQLQRACKIINEMPFKADSSIWGAVLA 459



 Score = 72.0 bits (175), Expect = 1e-10
 Identities = 39/138 (28%), Positives = 70/138 (50%)
 Frame = +2

Query: 29  ALITMYNKGGSIPDAEVVFQQVDSPDLVSWNTIIAGYAHHGHYDRALSSFDEMGLNGLKP 208
           A+IT + K G + DA  +FQ++   DLVSWN I+ GYA +G  + AL+ F +M   G++P
Sbjct: 221 AMITGFCKEGRMEDARDLFQEIRCRDLVSWNIIMTGYAQNGRGEEALNLFSQMIRTGMQP 280

Query: 209 DGITFLNILTACGHAGKVKESMDWFGIMANDHGIALRAEHYACMVDILCRAGQLEKACMI 388
           D +TF+++  AC     ++E      ++   HG          ++ +  + G +  +  +
Sbjct: 281 DDLTFVSVFIACASLASLEEGSKAHALLIK-HGFDSDLSVCNALITVHSKCGGIVDS-EL 338

Query: 389 ILGMPFEADAGVWGALLA 442
           + G     D   W  ++A
Sbjct: 339 VFGQISHPDLVSWNTIIA 356