BLASTX nr result
ID: Coptis24_contig00032272
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00032272
(696 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004150497.1| PREDICTED: uncharacterized protein LOC101220... 153 2e-41
ref|XP_002516955.1| conserved hypothetical protein [Ricinus comm... 149 1e-39
ref|XP_003534839.1| PREDICTED: uncharacterized protein LOC100786... 145 1e-38
ref|XP_002271732.1| PREDICTED: uncharacterized protein LOC100248... 139 1e-36
ref|XP_002328599.1| predicted protein [Populus trichocarpa] gi|2... 134 4e-35
>ref|XP_004150497.1| PREDICTED: uncharacterized protein LOC101220317 [Cucumis sativus]
gi|449531291|ref|XP_004172620.1| PREDICTED:
uncharacterized protein LOC101228395 [Cucumis sativus]
Length = 186
Score = 153 bits (387), Expect(2) = 2e-41
Identities = 80/150 (53%), Positives = 99/150 (66%), Gaps = 7/150 (4%)
Frame = -1
Query: 681 MTNKSPVFPIPQQPHHFSDYGFDPQIDYLQVLEEARKHKKDSSRSLEAVHFKLQKPISKE 502
M+ KSPVFP P++P HFSDYGFDPQIDY QVLEEARKH+++SSRS++++HFKLQKPISK+
Sbjct: 1 MSTKSPVFPFPEEPQHFSDYGFDPQIDYFQVLEEARKHRRESSRSIDSLHFKLQKPISKD 60
Query: 501 DHHTXXXXXXXXXXXXNALLFWKWKWVQEERFGDFEN-------EGRRNYMSGTGFSGPV 343
D NA LF+KWKW+ D N R SGPV
Sbjct: 61 DSKN-ITKKKKKRWWKNAFLFFKWKWIHIHHQNDAANFLHDDDVHQARARAFRASISGPV 119
Query: 342 YITESRSGSVTPCRMNSGRSTSGPISSTLT 253
Y+TESRSGS TPCR ++ R +SGP++ TLT
Sbjct: 120 YVTESRSGSSTPCR-STTRPSSGPLAGTLT 148
Score = 42.0 bits (97), Expect(2) = 2e-41
Identities = 22/26 (84%), Positives = 24/26 (92%), Gaps = 1/26 (3%)
Frame = -2
Query: 221 SLRELNMEQQQHRISTST-MPIYLVT 147
SLRELNMEQQQ+RIS+S MPIYLVT
Sbjct: 161 SLRELNMEQQQYRISSSAPMPIYLVT 186
>ref|XP_002516955.1| conserved hypothetical protein [Ricinus communis]
gi|223544043|gb|EEF45569.1| conserved hypothetical
protein [Ricinus communis]
Length = 184
Score = 149 bits (377), Expect(2) = 1e-39
Identities = 79/146 (54%), Positives = 100/146 (68%), Gaps = 3/146 (2%)
Frame = -1
Query: 681 MTNKSPVFPIPQQPHHFSDYGFDPQIDYLQVLEEARKHKKDSSRSLEAVHFKLQKPISKE 502
M NKSP+FP+P+ P HFSDYGFDPQIDY Q LEEARKHK++++RS++++HFKLQKPISK+
Sbjct: 1 MANKSPIFPMPE-PQHFSDYGFDPQIDYFQFLEEARKHKRETARSIDSLHFKLQKPISKD 59
Query: 501 DH-HTXXXXXXXXXXXXNALLFWKWKWV--QEERFGDFENEGRRNYMSGTGFSGPVYITE 331
++ + A LF KWKWV Q++ F D + R SGPVYITE
Sbjct: 60 EYSNKKPHKNKKKRWWKKAFLFLKWKWVQTQQDDFADEDVHKARARAFRASISGPVYITE 119
Query: 330 SRSGSVTPCRMNSGRSTSGPISSTLT 253
SRSGS TP R S R +SGP++ TLT
Sbjct: 120 SRSGSSTPYRTTS-RPSSGPLAGTLT 144
Score = 39.7 bits (91), Expect(2) = 1e-39
Identities = 21/28 (75%), Positives = 24/28 (85%), Gaps = 3/28 (10%)
Frame = -2
Query: 221 SLRELNMEQQQH---RISTSTMPIYLVT 147
SLRELN+EQQQ R+STS+MPIYLVT
Sbjct: 157 SLRELNVEQQQQQHQRMSTSSMPIYLVT 184
>ref|XP_003534839.1| PREDICTED: uncharacterized protein LOC100786266 [Glycine max]
Length = 182
Score = 145 bits (366), Expect(2) = 1e-38
Identities = 75/144 (52%), Positives = 96/144 (66%), Gaps = 1/144 (0%)
Frame = -1
Query: 681 MTNKSPVFPIPQQPHHFSDYGFDPQIDYLQVLEEARKHKKDSSRSLEAVHFKLQKPISKE 502
M+NKSPVFPIP P HFSDYGFDPQI+Y QVLEEA KHK++++RS++++HFKLQKPISK+
Sbjct: 1 MSNKSPVFPIPD-PQHFSDYGFDPQINYFQVLEEAMKHKRETARSIDSIHFKLQKPISKD 59
Query: 501 DHHTXXXXXXXXXXXXNALLFWKWKWVQEERFG-DFENEGRRNYMSGTGFSGPVYITESR 325
D + +ALLF+KW+W D + R SGPVY TE+R
Sbjct: 60 DSRSKAHRPRKKRWWRSALLFFKWRWAHHHHNNDDHDIHQARARAFRASISGPVYWTEAR 119
Query: 324 SGSVTPCRMNSGRSTSGPISSTLT 253
SGS TP R S R +SGP++ T+T
Sbjct: 120 SGSATPYRSTS-RPSSGPLAGTVT 142
Score = 40.8 bits (94), Expect(2) = 1e-38
Identities = 22/28 (78%), Positives = 23/28 (82%), Gaps = 3/28 (10%)
Frame = -2
Query: 221 SLRELNMEQQQH---RISTSTMPIYLVT 147
SLRELNMEQQQ R+STS MPIYLVT
Sbjct: 155 SLRELNMEQQQQLQQRMSTSAMPIYLVT 182
>ref|XP_002271732.1| PREDICTED: uncharacterized protein LOC100248252 [Vitis vinifera]
Length = 187
Score = 139 bits (351), Expect(2) = 1e-36
Identities = 78/151 (51%), Positives = 101/151 (66%), Gaps = 8/151 (5%)
Frame = -1
Query: 681 MTNKSPVFPIPQQPHHFSDYGFDPQIDYLQVLEEARKHKKDSSRSLEAVHFKLQKPISKE 502
M+N+ P+FP+P+ PHHFSDYGFDPQIDY QVLEEARKHK++ +RS++++HFKLQKPISK+
Sbjct: 1 MSNQCPIFPMPE-PHHFSDYGFDPQIDYFQVLEEARKHKRE-ARSIDSLHFKLQKPISKD 58
Query: 501 DHHTXXXXXXXXXXXXNALLFWKWKWVQEE---RFGDFENEGR-----RNYMSGTGFSGP 346
D +ALLF+KW+W + D +++ R R SGP
Sbjct: 59 D-SKKSGKIKRKRWWRSALLFFKWRWTHSDSRLHRDDDDDDDRDVHRARARAFRASISGP 117
Query: 345 VYITESRSGSVTPCRMNSGRSTSGPISSTLT 253
VYITESRSGS TP R S R +SGP++ TLT
Sbjct: 118 VYITESRSGSSTPYR-TSSRPSSGPLAGTLT 147
Score = 39.7 bits (91), Expect(2) = 1e-36
Identities = 23/28 (82%), Positives = 24/28 (85%), Gaps = 3/28 (10%)
Frame = -2
Query: 221 SLRELNME--QQQHRISTS-TMPIYLVT 147
SLRELN+E QQQHRISTS MPIYLVT
Sbjct: 160 SLRELNLEQQQQQHRISTSAAMPIYLVT 187
>ref|XP_002328599.1| predicted protein [Populus trichocarpa] gi|222838581|gb|EEE76946.1|
predicted protein [Populus trichocarpa]
Length = 190
Score = 134 bits (337), Expect(2) = 4e-35
Identities = 74/153 (48%), Positives = 96/153 (62%), Gaps = 10/153 (6%)
Frame = -1
Query: 681 MTNKSPVFPIPQQPHHFSDYGFDPQIDYLQVLEEARKHKKDSS---RSLEAVHFKLQKPI 511
M++KSP+FPIP+ P HFSDYGFDPQIDY Q LEEAR HK++++ S++++HFKLQKPI
Sbjct: 1 MSSKSPIFPIPE-PQHFSDYGFDPQIDYFQFLEEARNHKRETTTTRSSVDSLHFKLQKPI 59
Query: 510 SKED---HHTXXXXXXXXXXXXNALLFWKWKWVQEERFGDFENEG----RRNYMSGTGFS 352
SKE+ ALLF+KWKW+ D+ G R G S
Sbjct: 60 SKEESANRTIHKPNNKKKKWWRKALLFFKWKWIHSNHKDDYLGHGDVHIARARAFGASIS 119
Query: 351 GPVYITESRSGSVTPCRMNSGRSTSGPISSTLT 253
GPVY+T+S SGS TP R S R +SGP++ +LT
Sbjct: 120 GPVYLTDSLSGSSTPYRSTS-RPSSGPLAGSLT 151
Score = 40.0 bits (92), Expect(2) = 4e-35
Identities = 22/27 (81%), Positives = 22/27 (81%), Gaps = 2/27 (7%)
Frame = -2
Query: 221 SLRELNMEQ--QQHRISTSTMPIYLVT 147
SLRELNMEQ QQ ISTS MPIYLVT
Sbjct: 164 SLRELNMEQRQQQRSISTSAMPIYLVT 190