BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032267
         (689 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]    76   5e-12
emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera]    66   7e-09
gb|AAK51235.1|AF287471_1 polyprotein [Arabidopsis thaliana]            65   2e-08
gb|AAK62788.1|AC027036_9 polyprotein, putative [Arabidopsis thal...    64   2e-08
dbj|BAA87949.1| retrotransposon homolog, partial [Arabidopsis th...    64   2e-08

>emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]
          Length = 1424

 Score = 76.3 bits (186), Expect = 5e-12
 Identities = 64/244 (26%), Positives = 108/244 (44%), Gaps = 24/244 (9%)
 Frame = -3

Query: 663  TTPTSMWHQRAGHPSKHILHKILPVFQLSTTSCNVSSFCNACKLGKVTKLLF-------- 508
            T+P ++WH R GHPS HI+  +L    L   +   S  C+ C +GK+ K  F        
Sbjct: 501  TSPFTLWHNRLGHPSSHIVSLVLNKCNLPHLNKIPSLICSXCCMGKIHKSSFLHSTSSYT 560

Query: 507  ACLKLLPQNLWDLFALSLGTIIYSFYMDFFHCFISLIFSQYSKHSKQI*KIFIESKS--- 337
              L+L+  +LW   A +  +  + +Y+ F   +    +    KH  +  ++F+  KS   
Sbjct: 561  KPLELIHTDLWGP-ASTPSSHGHQYYIHFIDAYSRFTWIYMLKHKSEAFQVFLHFKSQVE 619

Query: 336  -----------FDRVGEYASTRLNNFLHAQGI*VRYSCPYS*AKWSS*KET*TQY--*NG 196
                        D  GEY S     +L + GI  R SCPY+  + +   E   ++   +G
Sbjct: 620  LQLGHKIKAVQSDWGGEYRS--FTQYLTSNGIIHRISCPYT-HEQNGLAERKHRHIVEHG 676

Query: 195  LGILLHIAMWLHNSGSMFSKPVYI**TGHQQNPSYQSPLQKLLKLSPNYAYLRVYGCYCF 16
            + +L   ++        F   VY+           +SPL+ L    P+Y+ L+V+GC C+
Sbjct: 677  IALLAQASLPFKYWDEAFRTSVYLINRLPTPVLKNKSPLEVLFHQKPSYSXLKVFGCMCY 736

Query: 15   PWIR 4
            P +R
Sbjct: 737  PNLR 740


>emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera]
          Length = 1171

 Score = 65.9 bits (159), Expect = 7e-09
 Identities = 64/237 (27%), Positives = 103/237 (43%), Gaps = 23/237 (9%)
 Frame = -3

Query: 645  WHQRAGHPSKHILHKILPVFQLSTTSCNVS-SFCNACKLGKVTKLLF--------ACLKL 493
            WH R GHPS  I + +    +LS    +    FC+AC+LGK  +L F          L L
Sbjct: 460  WHSRLGHPSSVIFNSLFHSNKLSVKGSSTKLEFCSACQLGKAKQLPFPESSRQSSVPLAL 519

Query: 492  LPQNLWDLFALSLGTI-IYSFYMDFFHCFISL--------IFSQYSKHSKQI*KIF---I 349
            +  ++W     S G    Y  ++D +  +  L        +F+ + K      K+F   I
Sbjct: 520  IHSDVWVSPVQSTGGCSYYVLFIDDYSRYSWLYPLHRKSDVFATFVKFKTIAEKLFSTSI 579

Query: 348  ESKSFDRVGEYASTRLNNFLHAQGI*VRYSCPYS*AKWSS*KET*TQY*N--GLGILLHI 175
            +    D  GE+ S +   FL AQGI  R +CP++ ++ +   E   ++    GL +L   
Sbjct: 580  KQIQTDNGGEFTSNQFKQFLTAQGIFHRLTCPHT-SQQNGIVERKHRHIQEMGLTLLAQS 638

Query: 174  AMWLHNSGSMFSKPVYI**TGHQQNPSYQSPLQKLLKLSPNYAYLRVYGCYCFPWIR 4
            ++        F   V++      +     +P   L K  P Y  LRV+GC C+P +R
Sbjct: 639  SLSPQYWVDAFLTSVFLINRLPTKVLDNLTPYFLLHKTEPTYMDLRVFGCACYPLLR 695


>gb|AAK51235.1|AF287471_1 polyprotein [Arabidopsis thaliana]
          Length = 1453

 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 66/244 (27%), Positives = 105/244 (43%), Gaps = 29/244 (11%)
 Frame = -3

Query: 648  MWHQRAGHPSKHILHKILPVFQLSTTSCNVSSFCNACKLGKVTKLLFAC-----LKLLPQ 484
            +WH R GH +  IL ++    ++S     +S  C  C++GK +KL F       L LL +
Sbjct: 458  IWHHRLGHSNSRILQQLKSSKEISFNKSRMSPVCEPCQMGKSSKLQFFSSNSRELDLLGR 517

Query: 483  NLWDLFALS--LGTIIYSFYM-------------------DFFHCFISLIFSQYSKHSKQ 367
               DL+  S  +    + +Y+                   DFF  F++      ++ + +
Sbjct: 518  IHCDLWGPSPVVSKQGFKYYVVFVDDYSRYSWFYPLKAKSDFFAVFVAFQNLVENQFNTK 577

Query: 366  I*KIFIESKSFDRVGEYASTRLNNFLHAQGI*VRYSCPYS*AKWSS*KET*TQY*N-GLG 190
            I K+F      D  GE+ S  +   L   GI  R SCPY+  +    +     +   GL 
Sbjct: 578  I-KVF----QSDGGGEFTSNLMKKHLTDCGIQHRISCPYTPQQNGIAERKHRHFVELGLS 632

Query: 189  ILLHIAMWLHNSGSMFSKPVYI**TGHQQNPSY--QSPLQKLLKLSPNYAYLRVYGCYCF 16
            ++ H    L      F    ++  +    +PS    SPL+ LLK  PNYA LRV+G  C+
Sbjct: 633  MMFHSHTPLQFWVEAFFTASFL--SNMLPSPSLGNVSPLEALLKQKPNYAMLRVFGTACY 690

Query: 15   PWIR 4
            P +R
Sbjct: 691  PCLR 694


>gb|AAK62788.1|AC027036_9 polyprotein, putative [Arabidopsis thaliana]
            gi|18265373|dbj|BAB84015.1| polyprotein [Arabidopsis
            thaliana]
          Length = 1466

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 68/246 (27%), Positives = 101/246 (41%), Gaps = 30/246 (12%)
 Frame = -3

Query: 651  SMWHQRAGHPSKHILHKILPVFQLSTTSCNVSSF-CNACKLGKVTKLLFAC--------L 499
            S WH R GHP+  IL+ ++  + LS  + +     C+ C + K  K+ F+         L
Sbjct: 465  SSWHARLGHPAPSILNSVISNYSLSVLNPSHKFLSCSDCLINKSNKVPFSQSTINSTRPL 524

Query: 498  KLLPQNLWDLFALSLGTIIYSFYMDFFHCFISLIFSQYSKHSKQI*KIFIESKSF----- 334
            + +  ++W    LS     Y +Y+ F   F    +    K   Q+ + FI  K+      
Sbjct: 525  EYIYSDVWSSPILSHDN--YRYYVIFVDHFTRYTWLYPLKQKSQVKETFITFKNLLENRF 582

Query: 333  -DRVGEYASTRLNNFL------HAQGI*VRYSCPY-------S*AKWSS*KET*TQY*NG 196
              R+G + S     F+         GI    S P+       S  K     ET      G
Sbjct: 583  QTRIGTFYSDNGGEFVALWEYFSQHGISHLTSPPHTPEHNGLSERKHRHIVET------G 636

Query: 195  LGILLHIAMWLHNSGSMFSKPVYI**TGHQQNPSYQ--SPLQKLLKLSPNYAYLRVYGCY 22
            L +L H ++        F+  VY+        P  Q  SP QKL   SPNY  LRV+GC 
Sbjct: 637  LTLLSHASIPKTYWPYAFAVAVYL--INRLPTPLLQLESPFQKLFGTSPNYDKLRVFGCA 694

Query: 21   CFPWIR 4
            C+PW+R
Sbjct: 695  CYPWLR 700


>dbj|BAA87949.1| retrotransposon homolog, partial [Arabidopsis thaliana]
          Length = 847

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 68/246 (27%), Positives = 101/246 (41%), Gaps = 30/246 (12%)
 Frame = -3

Query: 651  SMWHQRAGHPSKHILHKILPVFQLSTTSCNVSSF-CNACKLGKVTKLLFAC--------L 499
            S WH R GHP+  IL+ ++  + LS  + +     C+ C + K  K+ F+         L
Sbjct: 430  SSWHARLGHPAPSILNSVISNYSLSVLNPSHKFLSCSDCLINKSNKVPFSQSTINSTRPL 489

Query: 498  KLLPQNLWDLFALSLGTIIYSFYMDFFHCFISLIFSQYSKHSKQI*KIFIESKSF----- 334
            + +  ++W    LS     Y +Y+ F   F    +    K   Q+ + FI  K+      
Sbjct: 490  EYIYSDVWSSPILSHDN--YRYYVIFVDHFTRYTWLYPLKQKSQVKETFITFKNLLENRF 547

Query: 333  -DRVGEYASTRLNNFL------HAQGI*VRYSCPY-------S*AKWSS*KET*TQY*NG 196
              R+G + S     F+         GI    S P+       S  K     ET      G
Sbjct: 548  QTRIGTFYSDNGGEFVALWEYFSQHGISHLTSPPHTPEHNGLSERKHRHIVET------G 601

Query: 195  LGILLHIAMWLHNSGSMFSKPVYI**TGHQQNPSYQ--SPLQKLLKLSPNYAYLRVYGCY 22
            L +L H ++        F+  VY+        P  Q  SP QKL   SPNY  LRV+GC 
Sbjct: 602  LTLLSHASIPKTYWPYAFAVAVYL--INRLPTPLLQLESPFQKLFGTSPNYDKLRVFGCA 659

Query: 21   CFPWIR 4
            C+PW+R
Sbjct: 660  CYPWLR 665