BLASTX nr result

ID: Coptis24_contig00032262 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032262
         (376 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN62264.1| hypothetical protein VITISV_018458 [Vitis vinifera]   121   7e-26
ref|XP_002320010.1| predicted protein [Populus trichocarpa] gi|2...   112   2e-23
ref|XP_003611541.1| Protein ABSCISIC ACID-INSENSITIVE [Medicago ...   108   3e-22
ref|XP_002533570.1| Ocs element-binding factor, putative [Ricinu...   108   5e-22
ref|XP_002310886.1| predicted protein [Populus trichocarpa] gi|2...   107   1e-21

>emb|CAN62264.1| hypothetical protein VITISV_018458 [Vitis vinifera]
          Length = 297

 Score =  121 bits (303), Expect = 7e-26
 Identities = 63/130 (48%), Positives = 83/130 (63%), Gaps = 23/130 (17%)
 Frame = -3

Query: 326 QGGFTPWDTDQLMSLLLQQQPFETS-----------------------PITSNSGSDESI 216
           +GGFTPWD+ +L S+   Q+P  ++                       P+ SNSGSD   
Sbjct: 80  EGGFTPWDSQELFSIFQSQEPVLSNSGSDESNRKPVNSNSGSDGPNRKPLHSNSGSDGPN 139

Query: 215 RPVSGLDERKQRRMISNRESARRSRMRKQRHLEDLRNQVNRLRIDNREIANRLQLINHHC 36
           R  S  +ERK+RRMISNRESARRSRMRKQ+H+E+LRNQ+N+LRI NRE+ NRL+   +H 
Sbjct: 140 REDSAAEERKRRRMISNRESARRSRMRKQKHIENLRNQLNQLRIQNRELTNRLRSFTYHS 199

Query: 35  HLLKRDNERL 6
           HL+  DN +L
Sbjct: 200 HLVDSDNVQL 209


>ref|XP_002320010.1| predicted protein [Populus trichocarpa] gi|222860783|gb|EEE98325.1|
           predicted protein [Populus trichocarpa]
          Length = 197

 Score =  112 bits (281), Expect = 2e-23
 Identities = 64/130 (49%), Positives = 85/130 (65%), Gaps = 16/130 (12%)
 Frame = -3

Query: 347 SSDVFES-QGGFTPWDT-DQLMSLLLQQQPFETSP--------------ITSNSGSDESI 216
           +S+ F+S + GFTPWD  D   S     +P  +S                 SNSGSD+  
Sbjct: 16  ASNPFQSFENGFTPWDCFDPFSSSPQSPKPVGSSSGSDKSNQAGQNPDNSNSNSGSDDPN 75

Query: 215 RPVSGLDERKQRRMISNRESARRSRMRKQRHLEDLRNQVNRLRIDNREIANRLQLINHHC 36
              S +DERK+RRM+SNRESARRSRMRKQ+H+E+LRNQVNRLRI+NRE+ NRL+ + +H 
Sbjct: 76  PQASLIDERKRRRMVSNRESARRSRMRKQKHVENLRNQVNRLRIENRELTNRLRFVLYHS 135

Query: 35  HLLKRDNERL 6
           H ++ D +RL
Sbjct: 136 HGVRTDYDRL 145


>ref|XP_003611541.1| Protein ABSCISIC ACID-INSENSITIVE [Medicago truncatula]
           gi|355512876|gb|AES94499.1| Protein ABSCISIC
           ACID-INSENSITIVE [Medicago truncatula]
          Length = 157

 Score =  108 bits (271), Expect = 3e-22
 Identities = 63/123 (51%), Positives = 86/123 (69%), Gaps = 7/123 (5%)
 Frame = -3

Query: 353 MFSSDVFESQGGFTPWDTDQLMSLLLQQQPFETSP-ITSNSGSDE-SIRPVS-----GLD 195
           ++SSD        TPWD   ++S +   QP  TSP +TS+SGS E + +PV       ++
Sbjct: 5   LYSSDFTALDKSLTPWDFSNILSPI---QP--TSPKLTSSSGSGEPNEKPVMDGSNRNME 59

Query: 194 ERKQRRMISNRESARRSRMRKQRHLEDLRNQVNRLRIDNREIANRLQLINHHCHLLKRDN 15
           +RK+RRMISNRESARRSRMRKQRHLE+LRNQVNR R++NRE+ N LQ + + C+ ++ +N
Sbjct: 60  DRKRRRMISNRESARRSRMRKQRHLENLRNQVNRFRVENRELNNGLQFLLYQCNRVRTEN 119

Query: 14  ERL 6
           E L
Sbjct: 120 EWL 122


>ref|XP_002533570.1| Ocs element-binding factor, putative [Ricinus communis]
           gi|223526547|gb|EEF28805.1| Ocs element-binding factor,
           putative [Ricinus communis]
          Length = 201

 Score =  108 bits (270), Expect = 5e-22
 Identities = 61/131 (46%), Positives = 78/131 (59%), Gaps = 24/131 (18%)
 Frame = -3

Query: 326 QGGFTPWDT-DQLMSLLLQQQPFETSPITSNSGSDESIRP-------------------- 210
           + GFTPWD   Q     L  Q   T    S SGS+E   P                    
Sbjct: 24  ESGFTPWDDCSQFFENNLDSQYSSTKAAGSTSGSEEPNEPNRSDPTPANSNSSSDQEPNQ 83

Query: 209 ---VSGLDERKQRRMISNRESARRSRMRKQRHLEDLRNQVNRLRIDNREIANRLQLINHH 39
               S +DERK+RRMISNRESARRSRMRKQ+HLE+LRNQVNRLR++NRE+ NRL+ + +H
Sbjct: 84  RTVASVIDERKRRRMISNRESARRSRMRKQKHLENLRNQVNRLRVENREMTNRLRFVLYH 143

Query: 38  CHLLKRDNERL 6
              ++R+N++L
Sbjct: 144 WQSVRRENDQL 154


>ref|XP_002310886.1| predicted protein [Populus trichocarpa] gi|222853789|gb|EEE91336.1|
           predicted protein [Populus trichocarpa]
          Length = 154

 Score =  107 bits (267), Expect = 1e-21
 Identities = 54/108 (50%), Positives = 76/108 (70%), Gaps = 1/108 (0%)
 Frame = -3

Query: 326 QGGFTPWDTDQLMSLLLQQQPFETSPITSNSGSDESIRPV-SGLDERKQRRMISNRESAR 150
           + GFTPWD            PF ++P        +S +P  S  DERK+RRM+SNRESAR
Sbjct: 24  ENGFTPWDCFD---------PFPSAP--------QSPKPFGSSSDERKRRRMVSNRESAR 66

Query: 149 RSRMRKQRHLEDLRNQVNRLRIDNREIANRLQLINHHCHLLKRDNERL 6
           RSRMRKQ+H+++LRNQVNRLR++NRE+ NRL+++ +HCH ++ +N+ L
Sbjct: 67  RSRMRKQKHMDNLRNQVNRLRVENRELTNRLRIVLYHCHSVRTENDWL 114


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