BLASTX nr result
ID: Coptis24_contig00032249
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00032249 (314 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI29284.3| unnamed protein product [Vitis vinifera] 119 3e-25 emb|CAN74599.1| hypothetical protein VITISV_021494 [Vitis vinifera] 111 5e-23 ref|XP_002297892.1| predicted protein [Populus trichocarpa] gi|2... 93 3e-17 gb|ABK25914.1| unknown [Picea sitchensis] 78 6e-13 gb|ABR17311.1| unknown [Picea sitchensis] 73 2e-11 >emb|CBI29284.3| unnamed protein product [Vitis vinifera] Length = 512 Score = 119 bits (297), Expect = 3e-25 Identities = 60/101 (59%), Positives = 76/101 (75%) Frame = +2 Query: 11 MAVLDQTVQVLDLSPKVTLGDLNSFFLYCGTVEKILLERKEDQSQLAYVTFRQPFALQTA 190 M L+ TVQVLD+SPKVTL DLN FF YCGTV+ I L RK DQ+QLA+VTF+QP+A QTA Sbjct: 1 MGTLNLTVQVLDISPKVTLSDLNIFFSYCGTVDNIQLCRKNDQTQLAFVTFKQPYAFQTA 60 Query: 191 LLLNGAFIMDNRVRILPLRSIESPPVSYNMHDRTKKNEKQG 313 LLLNGA I D+ +RIL L+++ P+ + +T+ EKQG Sbjct: 61 LLLNGAVIGDSPIRILALQNLAIHPIPDKRNCKTQNKEKQG 101 >emb|CAN74599.1| hypothetical protein VITISV_021494 [Vitis vinifera] Length = 212 Score = 111 bits (278), Expect = 5e-23 Identities = 56/93 (60%), Positives = 70/93 (75%) Frame = +2 Query: 35 QVLDLSPKVTLGDLNSFFLYCGTVEKILLERKEDQSQLAYVTFRQPFALQTALLLNGAFI 214 QVLD+SPKVTL DLN FF YCGTV+ I L RK DQ+QLA+VTF+QP+A QTALLLNGA I Sbjct: 28 QVLDISPKVTLSDLNIFFSYCGTVDNIQLCRKNDQTQLAFVTFKQPYAFQTALLLNGAVI 87 Query: 215 MDNRVRILPLRSIESPPVSYNMHDRTKKNEKQG 313 D+ +RIL L+++ P+ + T+ EKQG Sbjct: 88 GDSPIRILALQNLAIHPIPDKRNCETQNKEKQG 120 >ref|XP_002297892.1| predicted protein [Populus trichocarpa] gi|222845150|gb|EEE82697.1| predicted protein [Populus trichocarpa] Length = 187 Score = 92.8 bits (229), Expect = 3e-17 Identities = 48/84 (57%), Positives = 59/84 (70%) Frame = +2 Query: 11 MAVLDQTVQVLDLSPKVTLGDLNSFFLYCGTVEKILLERKEDQSQLAYVTFRQPFALQTA 190 MA D T+QVL+LSP VT +LN+FF YCGTVEKI L++ +DQ Q A VTF QP+A QTA Sbjct: 1 MAQSDLTIQVLNLSPSVTRAELNTFFSYCGTVEKIELQKDKDQMQSALVTFTQPYAFQTA 60 Query: 191 LLLNGAFIMDNRVRILPLRSIESP 262 LLL+ A + +RIL IE P Sbjct: 61 LLLSDALLGGQPIRILSAHDIEIP 84 >gb|ABK25914.1| unknown [Picea sitchensis] Length = 215 Score = 78.2 bits (191), Expect = 6e-13 Identities = 38/72 (52%), Positives = 52/72 (72%) Frame = +2 Query: 23 DQTVQVLDLSPKVTLGDLNSFFLYCGTVEKILLERKEDQSQLAYVTFRQPFALQTALLLN 202 D TVQV +LS K T+ D+ FF Y GT++K LER Q+A+VTF++P+A +TA+LL Sbjct: 3 DYTVQVCNLSTKATVKDVKQFFSYSGTIKKAKLERSGQWEQVAFVTFKEPYASETAVLLT 62 Query: 203 GAFIMDNRVRIL 238 GA I+D RVRI+ Sbjct: 63 GATIIDQRVRIV 74 >gb|ABR17311.1| unknown [Picea sitchensis] Length = 245 Score = 73.2 bits (178), Expect = 2e-11 Identities = 33/70 (47%), Positives = 54/70 (77%) Frame = +2 Query: 29 TVQVLDLSPKVTLGDLNSFFLYCGTVEKILLERKEDQSQLAYVTFRQPFALQTALLLNGA 208 TVQV++LSP T + FF + GT+E + LER +++Q+A+VTF++P+A++TA+L++GA Sbjct: 11 TVQVMNLSPNATEQHVRDFFSHSGTIESVELERAGEEAQVAFVTFKEPYAVETAVLMSGA 70 Query: 209 FIMDNRVRIL 238 I+D RV I+ Sbjct: 71 TIVDQRVCIV 80