BLASTX nr result

ID: Coptis24_contig00032243 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032243
         (429 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525341.1| acyl-CoA oxidase, putative [Ricinus communis...   208   3e-52
ref|XP_002326656.1| predicted protein [Populus trichocarpa] gi|2...   208   4e-52
pdb|2FON|A Chain A, X-Ray Crystal Structure Of Leacx1, An Acyl-C...   206   2e-51
gb|ACO35357.1| Acyl-CoA dehydrogenase [Elaeis oleifera]               205   3e-51
gb|AAW78691.1| peroxisomal acyl-CoA oxidase 1A [Solanum cheesman...   204   8e-51

>ref|XP_002525341.1| acyl-CoA oxidase, putative [Ricinus communis]
           gi|223535400|gb|EEF37074.1| acyl-CoA oxidase, putative
           [Ricinus communis]
          Length = 664

 Score =  208 bits (530), Expect = 3e-52
 Identities = 98/132 (74%), Positives = 114/132 (86%)
 Frame = -3

Query: 397 VDYLADERRKAEFDVEAMKIVWAGSKHDFDVSHRISRLVASDPVFSKDGKARLGRNEAFK 218
           VD+LA+ER KA+FDV+ MKIVWAGS+H FDV+ R++RLVASDP F KD +A L R E FK
Sbjct: 4   VDHLAEERNKAQFDVDEMKIVWAGSRHAFDVADRMARLVASDPAFRKDNRAMLSRKELFK 63

Query: 217 NTLRKSAHAWKIIIELRLTEEEATKLRDFVDEPAPIDMHWDMFIPTIIGQGTEEQQKKWL 38
           NTLRK+AHAWK IIELRL+EEEA+KLR FVDEPA  D+HW MF+P I GQGTEEQQKKWL
Sbjct: 64  NTLRKAAHAWKRIIELRLSEEEASKLRTFVDEPAYTDLHWGMFVPAIKGQGTEEQQKKWL 123

Query: 37  PLAYKLQIIGCY 2
           PLA+K+QIIGCY
Sbjct: 124 PLAHKMQIIGCY 135


>ref|XP_002326656.1| predicted protein [Populus trichocarpa] gi|222833978|gb|EEE72455.1|
           predicted protein [Populus trichocarpa]
          Length = 664

 Score =  208 bits (529), Expect = 4e-52
 Identities = 98/132 (74%), Positives = 113/132 (85%)
 Frame = -3

Query: 397 VDYLADERRKAEFDVEAMKIVWAGSKHDFDVSHRISRLVASDPVFSKDGKARLGRNEAFK 218
           VD+LA ER K EFDV+AMKIVWAGS+H F++S R++RLVASDP F KDG+ RLGR E FK
Sbjct: 4   VDHLAHERNKTEFDVDAMKIVWAGSRHAFELSDRMARLVASDPAFQKDGRTRLGRKELFK 63

Query: 217 NTLRKSAHAWKIIIELRLTEEEATKLRDFVDEPAPIDMHWDMFIPTIIGQGTEEQQKKWL 38
           NTLRK+AHAWK I+ELRLTEEEA  LR FVDEP+  D+HW MFIP I GQGT+EQQ+KWL
Sbjct: 64  NTLRKAAHAWKRILELRLTEEEAGWLRSFVDEPSFTDLHWGMFIPAIKGQGTDEQQQKWL 123

Query: 37  PLAYKLQIIGCY 2
           PLAYK+QIIGCY
Sbjct: 124 PLAYKMQIIGCY 135


>pdb|2FON|A Chain A, X-Ray Crystal Structure Of Leacx1, An Acyl-Coa Oxidase
           From Lycopersicon Esculentum (Tomato)
           gi|109157677|pdb|2FON|B Chain B, X-Ray Crystal Structure
           Of Leacx1, An Acyl-Coa Oxidase From Lycopersicon
           Esculentum (Tomato) gi|109157678|pdb|2FON|C Chain C,
           X-Ray Crystal Structure Of Leacx1, An Acyl-Coa Oxidase
           From Lycopersicon Esculentum (Tomato)
          Length = 683

 Score =  206 bits (523), Expect = 2e-51
 Identities = 98/139 (70%), Positives = 119/139 (85%)
 Frame = -3

Query: 418 VVRMEQVVDYLADERRKAEFDVEAMKIVWAGSKHDFDVSHRISRLVASDPVFSKDGKARL 239
           +VR  + VDYLADER+KA FDV+ MKIVWAGS+HDF+++ RIS+LVASDP FSK+G+  L
Sbjct: 16  LVREMEGVDYLADERKKAGFDVDEMKIVWAGSRHDFELTDRISKLVASDPGFSKEGRTML 75

Query: 238 GRNEAFKNTLRKSAHAWKIIIELRLTEEEATKLRDFVDEPAPIDMHWDMFIPTIIGQGTE 59
            R E FKNTLRK+A+AWK IIELRL++EEAT LR +VDEPA  D+HW MFIP I GQGT+
Sbjct: 76  PRKELFKNTLRKAAYAWKRIIELRLSQEEATMLRRYVDEPAFTDLHWGMFIPAIKGQGTD 135

Query: 58  EQQKKWLPLAYKLQIIGCY 2
           +QQ+KWLPLAYK+QIIGCY
Sbjct: 136 KQQEKWLPLAYKMQIIGCY 154


>gb|ACO35357.1| Acyl-CoA dehydrogenase [Elaeis oleifera]
          Length = 212

 Score =  205 bits (522), Expect = 3e-51
 Identities = 96/132 (72%), Positives = 113/132 (85%)
 Frame = -3

Query: 397 VDYLADERRKAEFDVEAMKIVWAGSKHDFDVSHRISRLVASDPVFSKDGKARLGRNEAFK 218
           VD+LA ER KA+FDV+AMK+VWAGSKH  DVS R++RLVASDPVF KD +  LGR E FK
Sbjct: 4   VDHLAHERSKAQFDVDAMKVVWAGSKHALDVSDRMARLVASDPVFRKDDRTMLGRKELFK 63

Query: 217 NTLRKSAHAWKIIIELRLTEEEATKLRDFVDEPAPIDMHWDMFIPTIIGQGTEEQQKKWL 38
           NTLRK+AHAWK + ELRLTEEEA+ LR F+DEP+ +D+HW MF+P I GQGT+EQQKKWL
Sbjct: 64  NTLRKAAHAWKRVHELRLTEEEASMLRLFLDEPSYVDLHWGMFVPAIKGQGTDEQQKKWL 123

Query: 37  PLAYKLQIIGCY 2
           PLAYK+QIIGCY
Sbjct: 124 PLAYKMQIIGCY 135


>gb|AAW78691.1| peroxisomal acyl-CoA oxidase 1A [Solanum cheesmaniae]
          Length = 664

 Score =  204 bits (518), Expect = 8e-51
 Identities = 96/132 (72%), Positives = 115/132 (87%)
 Frame = -3

Query: 397 VDYLADERRKAEFDVEAMKIVWAGSKHDFDVSHRISRLVASDPVFSKDGKARLGRNEAFK 218
           VDYLADER+KA FDV+ MKIVWAGS+HDF+++ RIS+LVASDP FSK+G+  L R E FK
Sbjct: 4   VDYLADERKKAGFDVDEMKIVWAGSRHDFELTDRISKLVASDPGFSKEGRTMLPRKELFK 63

Query: 217 NTLRKSAHAWKIIIELRLTEEEATKLRDFVDEPAPIDMHWDMFIPTIIGQGTEEQQKKWL 38
           NTLRK+A+AWK IIELRL++EEAT LR +VDEPA  D+HW MFIP I GQGT++QQ+KWL
Sbjct: 64  NTLRKAAYAWKRIIELRLSQEEATMLRRYVDEPAFTDLHWGMFIPAIKGQGTDKQQEKWL 123

Query: 37  PLAYKLQIIGCY 2
           PLAYK+QIIGCY
Sbjct: 124 PLAYKMQIIGCY 135


Top