BLASTX nr result

ID: Coptis24_contig00032236 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032236
         (656 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265598.1| PREDICTED: peptidyl-prolyl cis-trans isomera...   247   1e-63
ref|XP_002312289.1| predicted protein [Populus trichocarpa] gi|2...   241   7e-62
ref|XP_004144165.1| PREDICTED: peptidyl-prolyl cis-trans isomera...   240   2e-61
ref|XP_003518783.1| PREDICTED: peptidyl-prolyl cis-trans isomera...   238   7e-61
ref|XP_002512060.1| glycine-rich RNA-binding protein, putative [...   236   2e-60

>ref|XP_002265598.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E [Vitis vinifera]
           gi|297743796|emb|CBI36679.3| unnamed protein product
           [Vitis vinifera]
          Length = 173

 Score =  247 bits (631), Expect = 1e-63
 Identities = 125/169 (73%), Positives = 135/169 (79%), Gaps = 1/169 (0%)
 Frame = +1

Query: 10  VQKNTLYVGGLAEEVNETILHSAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEXXXX 189
           VQKNTLYVGGLAEEVNE+ILHSAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKE    
Sbjct: 5   VQKNTLYVGGLAEEVNESILHSAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAAA 64

Query: 190 XXXXXXXXELYGRVLTVNYALPEKIKGGEQGWAAQPIWADADTWFXXXXXXXXXXXXXXX 369
                   ELYGRVLTVNYALPE+IKGGEQGWAAQPIWADADTWF               
Sbjct: 65  AMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQRIQAE 124

Query: 370 NRAAMQAAEDLHRKKQAEERDGEKEDDT-NKNDPMAMAEAEVLNQKNST 513
           NRAAMQAAE+LHRKK A+ER+GEK+++   K+DPMA  EAEVLNQ NS+
Sbjct: 125 NRAAMQAAEELHRKKMAQEREGEKDEEVEGKDDPMARVEAEVLNQSNSS 173


>ref|XP_002312289.1| predicted protein [Populus trichocarpa] gi|222852109|gb|EEE89656.1|
           predicted protein [Populus trichocarpa]
          Length = 174

 Score =  241 bits (616), Expect = 7e-62
 Identities = 124/168 (73%), Positives = 131/168 (77%), Gaps = 1/168 (0%)
 Frame = +1

Query: 10  VQKNTLYVGGLAEEVNETILHSAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEXXXX 189
           VQKNTLYVGGLAEEVNE ILH+ FIPFGDIKDVKTPLDQATQKHRSFGFVTFLE+E    
Sbjct: 7   VQKNTLYVGGLAEEVNEAILHATFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREDAAS 66

Query: 190 XXXXXXXXELYGRVLTVNYALPEKIKGGEQGWAAQPIWADADTWFXXXXXXXXXXXXXXX 369
                   ELYGRVLTVNYALPEKIKGGEQGWAAQPIWADADTWF               
Sbjct: 67  AMDNMDGAELYGRVLTVNYALPEKIKGGEQGWAAQPIWADADTWFERQQQEEEMQRMQAE 126

Query: 370 NRAAMQAAEDLHRKKQAEERDGEKEDDTN-KNDPMAMAEAEVLNQKNS 510
           NRAAM+AAE+LHRKK AEER+GEKED+   K+DPMA AEAEVL Q  S
Sbjct: 127 NRAAMEAAEELHRKKMAEEREGEKEDEGQVKDDPMARAEAEVLKQNIS 174


>ref|XP_004144165.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like [Cucumis
           sativus] gi|449529401|ref|XP_004171688.1| PREDICTED:
           peptidyl-prolyl cis-trans isomerase E-like [Cucumis
           sativus]
          Length = 171

 Score =  240 bits (612), Expect = 2e-61
 Identities = 122/168 (72%), Positives = 134/168 (79%), Gaps = 1/168 (0%)
 Frame = +1

Query: 7   AVQKNTLYVGGLAEEVNETILHSAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEXXX 186
           AVQKNTLYVGGLAEEVNE+ILH+AFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKE   
Sbjct: 4   AVQKNTLYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAS 63

Query: 187 XXXXXXXXXELYGRVLTVNYALPEKIKGGEQGWAAQPIWADADTWFXXXXXXXXXXXXXX 366
                    ELYGRVLTVNYALPE+IKGGEQGWAAQPIWADADTWF              
Sbjct: 64  AAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQRLQA 123

Query: 367 XNRAAMQAAEDLHRKKQAEERDGEKEDDTN-KNDPMAMAEAEVLNQKN 507
            NRAAM+AAE+LHRKK A+ER+GEK+++ + K DPMA AEAEVL Q +
Sbjct: 124 ENRAAMEAAEELHRKKLAQEREGEKDEEVDTKVDPMAKAEAEVLRQNS 171


>ref|XP_003518783.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like [Glycine max]
          Length = 172

 Score =  238 bits (607), Expect = 7e-61
 Identities = 120/166 (72%), Positives = 132/166 (79%), Gaps = 1/166 (0%)
 Frame = +1

Query: 10  VQKNTLYVGGLAEEVNETILHSAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEXXXX 189
           VQKNTLYVGGLAEEVNE+ILH+AFIPFGDIKDVKTPLDQATQKHRSFGFVTFLE+E    
Sbjct: 7   VQKNTLYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREDASA 66

Query: 190 XXXXXXXXELYGRVLTVNYALPEKIKGGEQGWAAQPIWADADTWFXXXXXXXXXXXXXXX 369
                   ELYGRVLTVNYALPE+IKGGEQGWAAQP+WADADTWF               
Sbjct: 67  AMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPVWADADTWFERQQQEEEMKRIEAE 126

Query: 370 NRAAMQAAEDLHRKKQAEERDGEKEDDTN-KNDPMAMAEAEVLNQK 504
           NRAAMQAAEDLHRK+ AE+R+GEKE++   K+DPMA AEAEVL  +
Sbjct: 127 NRAAMQAAEDLHRKQVAEQREGEKEEEIEIKDDPMAKAEAEVLQNQ 172


>ref|XP_002512060.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
           gi|223549240|gb|EEF50729.1| glycine-rich RNA-binding
           protein, putative [Ricinus communis]
          Length = 176

 Score =  236 bits (603), Expect = 2e-60
 Identities = 120/168 (71%), Positives = 129/168 (76%), Gaps = 1/168 (0%)
 Frame = +1

Query: 10  VQKNTLYVGGLAEEVNETILHSAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEXXXX 189
           VQKNTLYVGGLA+EVNE ILH+AFIPFGDIKDVKTPLDQATQKHR+FGFVTFLEKE    
Sbjct: 9   VQKNTLYVGGLADEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRAFGFVTFLEKEDAAA 68

Query: 190 XXXXXXXXELYGRVLTVNYALPEKIKGGEQGWAAQPIWADADTWFXXXXXXXXXXXXXXX 369
                   ELYGRVLTVNYALPEKIKGGEQGWAAQPIW DADTWF               
Sbjct: 69  AMDNMDGAELYGRVLTVNYALPEKIKGGEQGWAAQPIWKDADTWFERQRHQEEMERIQAE 128

Query: 370 NRAAMQAAEDLHRKKQAEERDGEKEDDTN-KNDPMAMAEAEVLNQKNS 510
           N+A MQAAE+LHRKK A+ER+GEKED+   K+DPMA AEAEV  Q  S
Sbjct: 129 NKATMQAAEELHRKKMAQEREGEKEDEMEVKDDPMARAEAEVSKQNGS 176


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