BLASTX nr result
ID: Coptis24_contig00032230
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00032230 (454 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002271315.1| PREDICTED: uncharacterized protein LOC100264... 91 1e-16 ref|XP_002319928.1| predicted protein [Populus trichocarpa] gi|2... 77 2e-12 ref|XP_002517992.1| conserved hypothetical protein [Ricinus comm... 75 6e-12 ref|XP_002325689.1| predicted protein [Populus trichocarpa] gi|2... 73 2e-11 gb|ADN33895.1| hypothetical protein [Cucumis melo subsp. melo] 66 3e-09 >ref|XP_002271315.1| PREDICTED: uncharacterized protein LOC100264907 [Vitis vinifera] Length = 466 Score = 90.5 bits (223), Expect = 1e-16 Identities = 54/112 (48%), Positives = 75/112 (66%) Frame = +3 Query: 105 RKQEITPIPSGKNRRGISLGPLEIASGVRSQRGKQEVTPIQPVKNRRGISLGPSEIIAGT 284 + +E + + + +RRG+SLGP EI +GVR RG+SLGPSEI AG Sbjct: 162 KTEESSSVRTKVHRRGVSLGPSEIVAGVR-----------------RGMSLGPSEIAAGG 204 Query: 285 RSQQRGKQELPPIQSTQNSRRKSCFYKLQEVDEGKVLKARGGRSLSLSPQSR 440 R + GK E+ PI STQ SRRKSCF+KL+++DEGKV K R G+S+++SP++R Sbjct: 205 RLRHLGKPEVTPI-STQ-SRRKSCFWKLEDIDEGKVTKER-GKSMTVSPKNR 253 >ref|XP_002319928.1| predicted protein [Populus trichocarpa] gi|222858304|gb|EEE95851.1| predicted protein [Populus trichocarpa] Length = 446 Score = 76.6 bits (187), Expect = 2e-12 Identities = 43/69 (62%), Positives = 55/69 (79%), Gaps = 1/69 (1%) Frame = +3 Query: 237 NRRGISLGPSEIIAGTRSQQR-GKQELPPIQSTQNSRRKSCFYKLQEVDEGKVLKARGGR 413 NRRG+SLGPSEI +G++S+ GKQE+ STQN RRKSCF+KL+E+DE K K R G+ Sbjct: 178 NRRGVSLGPSEIFSGSKSRLLFGKQEMKTPVSTQN-RRKSCFWKLEEIDELKATKER-GK 235 Query: 414 SLSLSPQSR 440 SLS+SP+SR Sbjct: 236 SLSVSPRSR 244 >ref|XP_002517992.1| conserved hypothetical protein [Ricinus communis] gi|223542974|gb|EEF44510.1| conserved hypothetical protein [Ricinus communis] Length = 443 Score = 75.1 bits (183), Expect = 6e-12 Identities = 44/80 (55%), Positives = 58/80 (72%), Gaps = 1/80 (1%) Frame = +3 Query: 204 KQEVTPIQPVK-NRRGISLGPSEIIAGTRSQQRGKQELPPIQSTQNSRRKSCFYKLQEVD 380 KQ V +P K NRRG+SLGPSEI + T+++ KQE+ ST+N RRKSCF+KL+E+D Sbjct: 165 KQTVKIEEPPKINRRGVSLGPSEIYSATKARLLSKQEMSTPVSTKN-RRKSCFWKLEEID 223 Query: 381 EGKVLKARGGRSLSLSPQSR 440 E K K R G+S S+SP+SR Sbjct: 224 ELKATKER-GKSSSVSPRSR 242 >ref|XP_002325689.1| predicted protein [Populus trichocarpa] gi|222862564|gb|EEF00071.1| predicted protein [Populus trichocarpa] Length = 443 Score = 73.2 bits (178), Expect = 2e-11 Identities = 41/69 (59%), Positives = 55/69 (79%), Gaps = 1/69 (1%) Frame = +3 Query: 237 NRRGISLGPSEIIAGTRSQQR-GKQELPPIQSTQNSRRKSCFYKLQEVDEGKVLKARGGR 413 NRRG+SLGPSEI++G++S+ GKQ++ S QN RRKSCF+KL+E+DE K K R G+ Sbjct: 178 NRRGVSLGPSEILSGSKSRLFCGKQDMNTPVSIQN-RRKSCFWKLEEIDELKATKER-GK 235 Query: 414 SLSLSPQSR 440 SLS+SP+SR Sbjct: 236 SLSVSPRSR 244 >gb|ADN33895.1| hypothetical protein [Cucumis melo subsp. melo] Length = 458 Score = 66.2 bits (160), Expect = 3e-09 Identities = 50/137 (36%), Positives = 70/137 (51%) Frame = +3 Query: 30 NGVRSNLRGVSIGPLEIAAGGARLQRKQEITPIPSGKNRRGISLGPLEIASGVRSQRGKQ 209 N + + L+ + I E A +QR PI S ++ + + GV Sbjct: 133 NRLATRLKALQIEKAEQKAVRTAVQRGARFVPIRSVDSKASS-----KNSDGVGKMFEDS 187 Query: 210 EVTPIQPVKNRRGISLGPSEIIAGTRSQQRGKQELPPIQSTQNSRRKSCFYKLQEVDEGK 389 V P + RG+SLGPSEI G ++++GK E+ P Q QN RR+SC KL ++DE K Sbjct: 188 LVEP--KICKNRGLSLGPSEIHGGIGARRQGKTEITPAQRIQN-RRQSCLPKLLDIDEVK 244 Query: 390 VLKARGGRSLSLSPQSR 440 K R G S SLSP+SR Sbjct: 245 A-KNRRGNSFSLSPKSR 260