BLASTX nr result

ID: Coptis24_contig00032230 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032230
         (454 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271315.1| PREDICTED: uncharacterized protein LOC100264...    91   1e-16
ref|XP_002319928.1| predicted protein [Populus trichocarpa] gi|2...    77   2e-12
ref|XP_002517992.1| conserved hypothetical protein [Ricinus comm...    75   6e-12
ref|XP_002325689.1| predicted protein [Populus trichocarpa] gi|2...    73   2e-11
gb|ADN33895.1| hypothetical protein [Cucumis melo subsp. melo]         66   3e-09

>ref|XP_002271315.1| PREDICTED: uncharacterized protein LOC100264907 [Vitis vinifera]
          Length = 466

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 54/112 (48%), Positives = 75/112 (66%)
 Frame = +3

Query: 105 RKQEITPIPSGKNRRGISLGPLEIASGVRSQRGKQEVTPIQPVKNRRGISLGPSEIIAGT 284
           + +E + + +  +RRG+SLGP EI +GVR                 RG+SLGPSEI AG 
Sbjct: 162 KTEESSSVRTKVHRRGVSLGPSEIVAGVR-----------------RGMSLGPSEIAAGG 204

Query: 285 RSQQRGKQELPPIQSTQNSRRKSCFYKLQEVDEGKVLKARGGRSLSLSPQSR 440
           R +  GK E+ PI STQ SRRKSCF+KL+++DEGKV K R G+S+++SP++R
Sbjct: 205 RLRHLGKPEVTPI-STQ-SRRKSCFWKLEDIDEGKVTKER-GKSMTVSPKNR 253


>ref|XP_002319928.1| predicted protein [Populus trichocarpa] gi|222858304|gb|EEE95851.1|
           predicted protein [Populus trichocarpa]
          Length = 446

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 43/69 (62%), Positives = 55/69 (79%), Gaps = 1/69 (1%)
 Frame = +3

Query: 237 NRRGISLGPSEIIAGTRSQQR-GKQELPPIQSTQNSRRKSCFYKLQEVDEGKVLKARGGR 413
           NRRG+SLGPSEI +G++S+   GKQE+    STQN RRKSCF+KL+E+DE K  K R G+
Sbjct: 178 NRRGVSLGPSEIFSGSKSRLLFGKQEMKTPVSTQN-RRKSCFWKLEEIDELKATKER-GK 235

Query: 414 SLSLSPQSR 440
           SLS+SP+SR
Sbjct: 236 SLSVSPRSR 244


>ref|XP_002517992.1| conserved hypothetical protein [Ricinus communis]
           gi|223542974|gb|EEF44510.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 443

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 44/80 (55%), Positives = 58/80 (72%), Gaps = 1/80 (1%)
 Frame = +3

Query: 204 KQEVTPIQPVK-NRRGISLGPSEIIAGTRSQQRGKQELPPIQSTQNSRRKSCFYKLQEVD 380
           KQ V   +P K NRRG+SLGPSEI + T+++   KQE+    ST+N RRKSCF+KL+E+D
Sbjct: 165 KQTVKIEEPPKINRRGVSLGPSEIYSATKARLLSKQEMSTPVSTKN-RRKSCFWKLEEID 223

Query: 381 EGKVLKARGGRSLSLSPQSR 440
           E K  K R G+S S+SP+SR
Sbjct: 224 ELKATKER-GKSSSVSPRSR 242


>ref|XP_002325689.1| predicted protein [Populus trichocarpa] gi|222862564|gb|EEF00071.1|
           predicted protein [Populus trichocarpa]
          Length = 443

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 41/69 (59%), Positives = 55/69 (79%), Gaps = 1/69 (1%)
 Frame = +3

Query: 237 NRRGISLGPSEIIAGTRSQQR-GKQELPPIQSTQNSRRKSCFYKLQEVDEGKVLKARGGR 413
           NRRG+SLGPSEI++G++S+   GKQ++    S QN RRKSCF+KL+E+DE K  K R G+
Sbjct: 178 NRRGVSLGPSEILSGSKSRLFCGKQDMNTPVSIQN-RRKSCFWKLEEIDELKATKER-GK 235

Query: 414 SLSLSPQSR 440
           SLS+SP+SR
Sbjct: 236 SLSVSPRSR 244


>gb|ADN33895.1| hypothetical protein [Cucumis melo subsp. melo]
          Length = 458

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 50/137 (36%), Positives = 70/137 (51%)
 Frame = +3

Query: 30  NGVRSNLRGVSIGPLEIAAGGARLQRKQEITPIPSGKNRRGISLGPLEIASGVRSQRGKQ 209
           N + + L+ + I   E  A    +QR     PI S  ++        + + GV       
Sbjct: 133 NRLATRLKALQIEKAEQKAVRTAVQRGARFVPIRSVDSKASS-----KNSDGVGKMFEDS 187

Query: 210 EVTPIQPVKNRRGISLGPSEIIAGTRSQQRGKQELPPIQSTQNSRRKSCFYKLQEVDEGK 389
            V P   +   RG+SLGPSEI  G  ++++GK E+ P Q  QN RR+SC  KL ++DE K
Sbjct: 188 LVEP--KICKNRGLSLGPSEIHGGIGARRQGKTEITPAQRIQN-RRQSCLPKLLDIDEVK 244

Query: 390 VLKARGGRSLSLSPQSR 440
             K R G S SLSP+SR
Sbjct: 245 A-KNRRGNSFSLSPKSR 260


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