BLASTX nr result

ID: Coptis24_contig00032226 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032226
         (354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81442.1| hypothetical protein VITISV_011546 [Vitis vinifera]    75   6e-12
emb|CAN68220.1| hypothetical protein VITISV_005372 [Vitis vinifera]    73   3e-11
emb|CAN70998.1| hypothetical protein VITISV_023635 [Vitis vinifera]    72   4e-11
emb|CAN66167.1| hypothetical protein VITISV_000143 [Vitis vinifera]    71   1e-10
emb|CAN70608.1| hypothetical protein VITISV_040198 [Vitis vinifera]    71   1e-10

>emb|CAN81442.1| hypothetical protein VITISV_011546 [Vitis vinifera]
          Length = 843

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 41/107 (38%), Positives = 62/107 (57%), Gaps = 2/107 (1%)
 Frame = +1

Query: 16   GSIQTIDNLNRRGMNIPNLCVYCKRVED-VDH-LLKCPITFRIWVLFHASFNIAWVPPSN 189
            G I T+D L RRG ++ N CV CK  E+  DH L+ C  T  +W +  +SF + WV P++
Sbjct: 704  GKISTVDMLMRRGWSMVNRCVLCKENEESTDHILIHCGKTRELWTVVLSSFGVVWVFPNS 763

Query: 190  IKEALGESIITGPLFNKAKWLVDHLPNVIVWTLWKERNTRIFKQKER 330
            ++  L E  I G L  K   +   +P  + W +W ERN R+F++KE+
Sbjct: 764  VRNLLLEWKIKG-LEKKMSVVWKMVPICLFWCIWGERNRRMFQEKEK 809


>emb|CAN68220.1| hypothetical protein VITISV_005372 [Vitis vinifera]
          Length = 577

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 42/114 (36%), Positives = 59/114 (51%), Gaps = 4/114 (3%)
 Frame = +1

Query: 16  GSIQTIDNLNRRGMNIPNLCVYCKRVED-VDH-LLKCPITFRIWVLFHASFNIAWVPPSN 189
           G   T+D L RRG  + N C  C+R E+ +DH LL C     +WVL  + F + WV P+ 
Sbjct: 453 GKTLTLDQLQRRGWALANRCYLCQRHEESIDHILLHCDKARTLWVLLFSMFGVQWVLPAM 512

Query: 190 IKEALG--ESIITGPLFNKAKWLVDHLPNVIVWTLWKERNTRIFKQKERELQKL 345
           +KE L        G    K K +    P  + WT+WK RN   FK++E  +Q+L
Sbjct: 513 VKEMLSGWNGTFVG---KKRKGVWKASPLCLFWTVWKTRNKVAFKEEELSIQRL 563


>emb|CAN70998.1| hypothetical protein VITISV_023635 [Vitis vinifera]
          Length = 501

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 2/107 (1%)
 Frame = +1

Query: 16  GSIQTIDNLNRRGMNIPNLCVYCKRVED-VDH-LLKCPITFRIWVLFHASFNIAWVPPSN 189
           G I T+D L RRG ++ N CV CK  E+  DH L+ C  T  +W +  +SF + WV P++
Sbjct: 362 GKISTVDMLMRRGWSMVNRCVLCKENEESTDHILIHCGKTRELWTVVLSSFGVVWVFPNS 421

Query: 190 IKEALGESIITGPLFNKAKWLVDHLPNVIVWTLWKERNTRIFKQKER 330
           ++  L E  I G L  +   +   +P  + W +W ERN R+F+++E+
Sbjct: 422 VRNLLLEWKIKG-LEKRRSVVWKMVPICLFWCIWGERNRRMFQEEEK 467


>emb|CAN66167.1| hypothetical protein VITISV_000143 [Vitis vinifera]
          Length = 251

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 44/113 (38%), Positives = 57/113 (50%), Gaps = 3/113 (2%)
 Frame = +1

Query: 16  GSIQTIDNLNRRGMNIPNLCVYCK-RVEDVDH-LLKCPITFRIWVLFHASFNIAWVPPSN 189
           G I T+D L +RG   PN C  C    E V+H LL C +   +W +  A   + WV P  
Sbjct: 108 GKILTLDRLQKRGWQFPNRCFLCGCEEESVNHILLHCIVVRALWDIVFALVGVQWVFPEL 167

Query: 190 IKEALGESIITGPLFNKA-KWLVDHLPNVIVWTLWKERNTRIFKQKERELQKL 345
           +KEAL      GP   K  K + + +P  I WT+WKERN   FK     +QKL
Sbjct: 168 VKEALFSW--RGPFVGKKRKKIWNSIPLCIFWTVWKERNRLAFKGGVLNIQKL 218


>emb|CAN70608.1| hypothetical protein VITISV_040198 [Vitis vinifera]
          Length = 1138

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 41/115 (35%), Positives = 61/115 (53%), Gaps = 4/115 (3%)
 Frame = +1

Query: 16   GSIQTIDNLNRRGMNIPNLCVYCKRVEDVDH--LLKCPITFRIWVLFHASFNIAWVPPSN 189
            G + T+D L  RG+ +PN C  C   E+  H  LL C +T  +W +     ++ WV P  
Sbjct: 680  GKVLTLDRLQLRGVQLPNCCYLCGCEEENVHHILLHCIVTRALWEIIFGLIDVKWVHPET 739

Query: 190  IKEALGESIITGPLFNKAKWLVDHLPNVIVWTLWKERNT--RIFKQKERELQKLV 348
            +KEAL  S     +  K K +   +P  I WT+WKERN+  R+F  +  EL +L+
Sbjct: 740  VKEAL-ISWRGSFVGKKRKRIWKSIPLCIFWTVWKERNSQQRVFAVQVFELHRLI 793


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