BLASTX nr result

ID: Coptis24_contig00032214 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032214
         (311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21262.3| unnamed protein product [Vitis vinifera]              104   6e-21
ref|XP_002276030.1| PREDICTED: LRR receptor-like serine/threonin...   104   6e-21
gb|ABF72006.1| leucine-rich repeat-containing protein kinase fam...    98   8e-19
ref|XP_003548492.1| PREDICTED: LRR receptor-like serine/threonin...    94   9e-18
ref|XP_002512822.1| ATP binding protein, putative [Ricinus commu...    88   8e-16

>emb|CBI21262.3| unnamed protein product [Vitis vinifera]
          Length = 481

 Score =  104 bits (260), Expect = 6e-21
 Identities = 57/107 (53%), Positives = 73/107 (68%), Gaps = 4/107 (3%)
 Frame = -1

Query: 311 VSFNNLSGLIPDFQHWIGCDGFRGNKYLQPCSDPTSASPSGLPVPL---WHGQRKKMRLV 141
           VSFNNLSG IP  QH   CD F+GN+YL PC DP SA P  LP  L      ++ K++  
Sbjct: 316 VSFNNLSGHIPQLQHLSNCDFFKGNQYLHPCLDPYSAPPDRLPDLLEVHKEYRQSKLKSF 375

Query: 140 IISMVTSASVLAFI-LVTVIVLVPGRRKLARFASLRRKLVVSFVEVP 3
           +I+MV SAS + FI LV V+VL+ GRRK++R  SLRRK+VV+F + P
Sbjct: 376 VIAMVASASFILFILLVMVLVLILGRRKISRLTSLRRKVVVTFADAP 422


>ref|XP_002276030.1| PREDICTED: LRR receptor-like serine/threonine-protein kinase RPK2
           [Vitis vinifera] gi|147802220|emb|CAN68268.1|
           hypothetical protein VITISV_029909 [Vitis vinifera]
          Length = 1066

 Score =  104 bits (260), Expect = 6e-21
 Identities = 57/107 (53%), Positives = 73/107 (68%), Gaps = 4/107 (3%)
 Frame = -1

Query: 311 VSFNNLSGLIPDFQHWIGCDGFRGNKYLQPCSDPTSASPSGLPVPL---WHGQRKKMRLV 141
           VSFNNLSG IP  QH   CD F+GN+YL PC DP SA P  LP  L      ++ K++  
Sbjct: 669 VSFNNLSGHIPQLQHLSNCDFFKGNQYLHPCLDPYSAPPDRLPDLLEVHKEYRQSKLKSF 728

Query: 140 IISMVTSASVLAFI-LVTVIVLVPGRRKLARFASLRRKLVVSFVEVP 3
           +I+MV SAS + FI LV V+VL+ GRRK++R  SLRRK+VV+F + P
Sbjct: 729 VIAMVASASFILFILLVMVLVLILGRRKISRLTSLRRKVVVTFADAP 775


>gb|ABF72006.1| leucine-rich repeat-containing protein kinase family protein [Musa
           acuminata]
          Length = 1053

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 52/108 (48%), Positives = 71/108 (65%), Gaps = 5/108 (4%)
 Frame = -1

Query: 311 VSFNNLSGLIPDFQHWIGCDGFRGNKYLQPCSDPTSASPSGLP----VPLWHGQRKKMRL 144
           VSFNNLSG IP  +H   C  F GN +L+PC DP+ ++PSG+P    +P    ++ +++ 
Sbjct: 649 VSFNNLSGDIPHLEHSTDCKFFLGNSFLKPCQDPSMSAPSGIPFKTEIPDQGHRKSRLKY 708

Query: 143 VIISMVTSASVL-AFILVTVIVLVPGRRKLARFASLRRKLVVSFVEVP 3
             I+ V SASVL + +LV   VLV GRRK  R  SLR+KLVV+F +VP
Sbjct: 709 FTIAAVASASVLVSVLLVLTFVLVSGRRKFVRITSLRKKLVVTFTDVP 756


>ref|XP_003548492.1| PREDICTED: LRR receptor-like serine/threonine-protein kinase
           RPK2-like, partial [Glycine max]
          Length = 1022

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 53/107 (49%), Positives = 71/107 (66%), Gaps = 4/107 (3%)
 Frame = -1

Query: 311 VSFNNLSGLIPDFQHWIGCDGFRGNKYLQPCSDPTSASPSGLPVPL---WHGQRKKMRLV 141
           VSFNNLSG IP  QH   CD ++GN +L  C DP S SP+ LP PL      +R K+R +
Sbjct: 625 VSFNNLSGHIPHLQHPSVCDSYKGNAHLHSCPDPYSDSPASLPFPLEIQRTHKRWKLRTM 684

Query: 140 IISMVTSASV-LAFILVTVIVLVPGRRKLARFASLRRKLVVSFVEVP 3
           +I++VTSASV L  +LV V+V+   R K  R +S+RR+ VV+F +VP
Sbjct: 685 VIAVVTSASVTLCTLLVIVLVIFSRRSKFGRLSSIRRRQVVTFQDVP 731


>ref|XP_002512822.1| ATP binding protein, putative [Ricinus communis]
           gi|223547833|gb|EEF49325.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 1050

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 44/103 (42%), Positives = 63/103 (61%)
 Frame = -1

Query: 311 VSFNNLSGLIPDFQHWIGCDGFRGNKYLQPCSDPTSASPSGLPVPLWHGQRKKMRLVIIS 132
           VSFNNLSG +P FQH   CD FRGN +L+PC    S++ S      WH  R +  L++  
Sbjct: 658 VSFNNLSGHLPQFQHLSSCDWFRGNTFLEPCPSSKSSTDSN-GDGKWHRHRNEKPLILAL 716

Query: 131 MVTSASVLAFILVTVIVLVPGRRKLARFASLRRKLVVSFVEVP 3
            V++ +V    LV V++ +  +RKL R +SLR K+VV+F + P
Sbjct: 717 SVSAFAVFCLFLVGVVIFIHWKRKLNRLSSLRGKVVVTFADAP 759


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