BLASTX nr result

ID: Coptis24_contig00032208 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032208
         (418 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330794.1| predicted protein [Populus trichocarpa] gi|2...   144   7e-33
ref|XP_002317009.1| predicted protein [Populus trichocarpa] gi|2...   142   4e-32
ref|XP_004138566.1| PREDICTED: probable LRR receptor-like serine...   141   6e-32
ref|XP_002271317.2| PREDICTED: probable LRR receptor-like serine...   141   6e-32
ref|XP_002512884.1| serine-threonine protein kinase, plant-type,...   139   2e-31

>ref|XP_002330794.1| predicted protein [Populus trichocarpa] gi|222872596|gb|EEF09727.1|
           predicted protein [Populus trichocarpa]
          Length = 966

 Score =  144 bits (363), Expect = 7e-33
 Identities = 71/112 (63%), Positives = 86/112 (76%), Gaps = 1/112 (0%)
 Frame = +1

Query: 82  KPKAKP-PTEQVQGVVRVSYNDLHKATNGFSSANLIGMGGYGSVYKGILSQDEEPIAVKV 258
           + K +P PT     V ++SY  L KAT+GFS  NL+G+GG+GSVYKGIL  DE+ +AVKV
Sbjct: 612 RKKVEPTPTSPENSVFQMSYRSLLKATDGFSLTNLLGVGGFGSVYKGILDNDEKLVAVKV 671

Query: 259 FNLLEPRASKSFIAECEALRTVRHRNLLKILTVCSSEDFRGNKFKALVFEFM 414
            NLL PRASKSF AECE LR VRHRNL+K+LT CS  D++GN FKALV+EFM
Sbjct: 672 LNLLNPRASKSFKAECEVLRNVRHRNLVKLLTACSGSDYQGNDFKALVYEFM 723


>ref|XP_002317009.1| predicted protein [Populus trichocarpa] gi|222860074|gb|EEE97621.1|
           predicted protein [Populus trichocarpa]
          Length = 1017

 Score =  142 bits (357), Expect = 4e-32
 Identities = 70/97 (72%), Positives = 81/97 (83%)
 Frame = +1

Query: 127 RVSYNDLHKATNGFSSANLIGMGGYGSVYKGILSQDEEPIAVKVFNLLEPRASKSFIAEC 306
           +VSY  L KATNGFSS NLIG GG+GSVY+GIL QD+  +A+KV NL    ASKSF+AEC
Sbjct: 697 KVSYEMLLKATNGFSSDNLIGEGGFGSVYRGILDQDDTVVAIKVLNLQTRGASKSFVAEC 756

Query: 307 EALRTVRHRNLLKILTVCSSEDFRGNKFKALVFEFMP 417
           EALR VRHRNLLKI+T CSS DF+GN+FKALV+EFMP
Sbjct: 757 EALRNVRHRNLLKIITSCSSVDFQGNEFKALVYEFMP 793


>ref|XP_004138566.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase
            At3g47570-like [Cucumis sativus]
          Length = 1023

 Score =  141 bits (355), Expect = 6e-32
 Identities = 72/117 (61%), Positives = 86/117 (73%), Gaps = 2/117 (1%)
 Frame = +1

Query: 70   YWNKKPKAKPPTEQV--QGVVRVSYNDLHKATNGFSSANLIGMGGYGSVYKGILSQDEEP 243
            +W++K K K             VSYNDL KATN FS  NLIG+GGYGSVYKGILSQD+  
Sbjct: 677  FWSRKKKNKSDLSPSLKASYFAVSYNDLLKATNEFSPDNLIGVGGYGSVYKGILSQDKSV 736

Query: 244  IAVKVFNLLEPRASKSFIAECEALRTVRHRNLLKILTVCSSEDFRGNKFKALVFEFM 414
            +AVKVFNL    ASKSF+AECEAL+ +RHRNL++IL+ CS  DF+GN F ALVF+FM
Sbjct: 737  VAVKVFNLQHRGASKSFLAECEALKNIRHRNLVRILSACSGVDFQGNDFMALVFDFM 793


>ref|XP_002271317.2| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At3g47570-like, partial [Vitis vinifera]
          Length = 965

 Score =  141 bits (355), Expect = 6e-32
 Identities = 69/115 (60%), Positives = 88/115 (76%), Gaps = 1/115 (0%)
 Frame = +1

Query: 73  WNKKPKAKPPTEQVQ-GVVRVSYNDLHKATNGFSSANLIGMGGYGSVYKGILSQDEEPIA 249
           W +K K +P +   +  +++VSY  L +AT+GFSS+NLIG+G +GSVYKGIL  D   IA
Sbjct: 606 WLRKKKGEPASSSSEKSLLKVSYQSLLRATDGFSSSNLIGVGSFGSVYKGILDHDGTAIA 665

Query: 250 VKVFNLLEPRASKSFIAECEALRTVRHRNLLKILTVCSSEDFRGNKFKALVFEFM 414
           VKV NLL   ASKSFIAECEALR +RHRNL+K+LT CS  D++GN FKA+V+EFM
Sbjct: 666 VKVLNLLRKGASKSFIAECEALRNIRHRNLVKVLTACSGVDYQGNDFKAVVYEFM 720


>ref|XP_002512884.1| serine-threonine protein kinase, plant-type, putative [Ricinus
           communis] gi|223547895|gb|EEF49387.1| serine-threonine
           protein kinase, plant-type, putative [Ricinus communis]
          Length = 600

 Score =  139 bits (351), Expect = 2e-31
 Identities = 69/113 (61%), Positives = 86/113 (76%)
 Frame = +1

Query: 76  NKKPKAKPPTEQVQGVVRVSYNDLHKATNGFSSANLIGMGGYGSVYKGILSQDEEPIAVK 255
           +KK  +  P    Q + RVSY+DLH ATNGFSS NLIG G +GSVYKG ++Q E P+A+K
Sbjct: 244 SKKSTSSTPLMTDQNI-RVSYHDLHLATNGFSSVNLIGSGSFGSVYKGFINQMESPVAIK 302

Query: 256 VFNLLEPRASKSFIAECEALRTVRHRNLLKILTVCSSEDFRGNKFKALVFEFM 414
           V  L +  ASKSF+AEC ALR VRHRNL+K+LT CSS D++ N+FKAL+FEFM
Sbjct: 303 VLKLQQKGASKSFMAECNALRNVRHRNLVKLLTYCSSLDYKQNEFKALIFEFM 355


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