BLASTX nr result
ID: Coptis24_contig00032202
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00032202 (525 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002283776.1| PREDICTED: protein VERNALIZATION INSENSITIVE... 163 2e-38 ref|XP_003544248.1| PREDICTED: protein VERNALIZATION INSENSITIVE... 114 7e-24 ref|XP_003518265.1| PREDICTED: protein VERNALIZATION INSENSITIVE... 111 6e-23 emb|CBI19277.3| unnamed protein product [Vitis vinifera] 105 5e-21 ref|XP_004163957.1| PREDICTED: protein VERNALIZATION INSENSITIVE... 104 9e-21 >ref|XP_002283776.1| PREDICTED: protein VERNALIZATION INSENSITIVE 3-like [Vitis vinifera] Length = 617 Score = 163 bits (412), Expect = 2e-38 Identities = 88/179 (49%), Positives = 115/179 (64%), Gaps = 4/179 (2%) Frame = -1 Query: 525 DFLGCRIWHRKYAV-EYPEKPTYIVLRPQKRFVIPDLDPSTEYFFKISVFSKAKELGAWE 349 +FLGCR+WHRK + +YPEKPTYIVLRP+KRF + DL+PSTEY K+S+FS + LG WE Sbjct: 360 EFLGCRLWHRKSTMKDYPEKPTYIVLRPEKRFQVTDLNPSTEYLCKVSLFSSTRVLGVWE 419 Query: 348 STCVTQAPSGCLSLGLDAEPEK-EQVITSHDTSQRDSTNSSDNKLADSDNHSKVQLSDDI 172 + VT + S LD E + E + + SQ DSTNSSD KL D+ K++ DDI Sbjct: 420 AKWVTPSLSRSSVSALDDEHRRGENTLMLQEYSQMDSTNSSDTKLVSCDHSEKLRSLDDI 479 Query: 171 --SKIDGSNVRPRDIGSVPFTGSVCVPPATPCKSDGTQEVPGSTTKKQSAESNYEYCVR 1 +K G ++ P + +VP VPP+TP K+D EVPG +KKQ ES+YEY VR Sbjct: 480 NKNKNSGFHILPPPMEAVPLLIPSSVPPSTPSKTDKMHEVPGLGSKKQIRESDYEYSVR 538 >ref|XP_003544248.1| PREDICTED: protein VERNALIZATION INSENSITIVE 3-like [Glycine max] Length = 633 Score = 114 bits (286), Expect = 7e-24 Identities = 69/191 (36%), Positives = 107/191 (56%), Gaps = 16/191 (8%) Frame = -1 Query: 525 DFLGCRIWHRKYAVEYPEKPTYIVLRPQKRFVIPDLDPSTEYFFKISVFSKAKELGA--- 355 +FLGCR+WHR ++YPE+PT+IVLRP+KRF + +L PSTEYF K S+FS LGA Sbjct: 376 NFLGCRLWHRISTIDYPEQPTFIVLRPEKRFKLENLHPSTEYFCKASLFSSTGILGAAEA 435 Query: 354 -WESTCVTQAPSGCLSLGLDA---EPEK------EQVITSHDTSQRDSTNS--SDNKLAD 211 W + C PS +S G + P++ + T++ T S SD KL+ Sbjct: 436 KWVTPCEPSNPSKVISGGGNRFRWSPQRPSGTGVDMCTQDRITAEIHPTESANSDMKLST 495 Query: 210 SDNHSKVQLSDDI-SKIDGSNVRPRDIGSVPFTGSVCVPPATPCKSDGTQEVPGSTTKKQ 34 ++ K + +I S+ + +P+ + + V P+TP KS +++PG ++K+ Sbjct: 496 GEHPGKKHIILNIRSRFEEFLSKPQPVEPFSYKNLAAVSPSTPSKSYEMRQIPGLNSRKR 555 Query: 33 SAESNYEYCVR 1 S E++YEY VR Sbjct: 556 SKENDYEYSVR 566 >ref|XP_003518265.1| PREDICTED: protein VERNALIZATION INSENSITIVE 3-like [Glycine max] Length = 630 Score = 111 bits (278), Expect = 6e-23 Identities = 69/191 (36%), Positives = 108/191 (56%), Gaps = 16/191 (8%) Frame = -1 Query: 525 DFLGCRIWHRKYAVEYPEKPTYIVLRPQKRFVIPDLDPSTEYFFKISVFSKAKELGAWES 346 +FLGCR+WHR ++YPE+PT+IVLRP+KRF + +L PSTEYF K S+FS LGA E+ Sbjct: 373 NFLGCRLWHRLSTMDYPEQPTFIVLRPEKRFKLENLHPSTEYFCKASLFSSTGILGAAEA 432 Query: 345 TCVTQA----PSGCLSLGLDA---EPEK------EQVITSHDTSQRDSTNS--SDNKLAD 211 T VT PS ++ G + P++ + T++ T S S+ KL+ Sbjct: 433 TWVTPCEPTNPSKVINCGGNRFRWSPQRPSGTGVNMCAQNRITAEIHPTESANSEMKLSS 492 Query: 210 SDNHSKVQLSDDI-SKIDGSNVRPRDIGSVPFTGSVCVPPATPCKSDGTQEVPGSTTKKQ 34 ++ K + +I S+ + +P+ + + V P+TP KS +++PG ++K Sbjct: 493 GEHPGKKHIILNIRSRFEEFLSKPQPVEPFSYKNLAAVSPSTPSKSYEMRQIPGLNSRKF 552 Query: 33 SAESNYEYCVR 1 S E++YEY VR Sbjct: 553 SKENDYEYSVR 563 >emb|CBI19277.3| unnamed protein product [Vitis vinifera] Length = 362 Score = 105 bits (261), Expect = 5e-21 Identities = 53/103 (51%), Positives = 69/103 (66%), Gaps = 2/103 (1%) Frame = -1 Query: 525 DFLGCRIWHRKYAV-EYPEKPTYIVLRPQKRFVIPDLDPSTEYFFKISVFSKAKELGAWE 349 +FLGCR+WHRK + +YPEKPTYIVLRP+KRF + DL+PSTEY K+S+FS + LG WE Sbjct: 175 EFLGCRLWHRKSTMKDYPEKPTYIVLRPEKRFQVTDLNPSTEYLCKVSLFSSTRVLGVWE 234 Query: 348 STCVTQAPSGCLSLGLDAEPEK-EQVITSHDTSQRDSTNSSDN 223 + VT + S LD E + E + + SQ DSTNS + Sbjct: 235 AKWVTPSLSRSSVSALDDEHRRGENTLMLQEYSQMDSTNSKSD 277 >ref|XP_004163957.1| PREDICTED: protein VERNALIZATION INSENSITIVE 3-like [Cucumis sativus] Length = 619 Score = 104 bits (259), Expect = 9e-21 Identities = 65/179 (36%), Positives = 97/179 (54%), Gaps = 4/179 (2%) Frame = -1 Query: 525 DFLGCRIWHRKY-AVEYPEKPTYIVLRPQKRFVIPDLDPSTEYFFKISVFSKAKELGAWE 349 DFLGCR+WHRK A +YP++P++I L+P+K+F I DL PSTEY+ K+S+FS + G WE Sbjct: 376 DFLGCRLWHRKANAKDYPDQPSFIALKPEKKFKINDLFPSTEYYCKVSLFSSIQVFGVWE 435 Query: 348 STCVT---QAPSGCLSLGLDAEPEKEQVITSHDTSQRDSTNSSDNKLADSDNHSKVQLSD 178 + VT P L E ++ S S+ + TN L + +K Sbjct: 436 AKWVTPKLSTPYPGLGKHRSGEIRTIDLLPSRVDSKGNLTN-----LHPWNGLNK----- 485 Query: 177 DISKIDGSNVRPRDIGSVPFTGSVCVPPATPCKSDGTQEVPGSTTKKQSAESNYEYCVR 1 SK + P S+ + V P+TPCK+ T+ + GS K+++ ES+Y+Y VR Sbjct: 486 --SKWESHYKNPSPKNSITPMKPISVCPSTPCKTSETRILLGSNCKRRTEESDYDYSVR 542