BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032182
         (442 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276416.2| PREDICTED: putative pentatricopeptide repeat...   170   1e-40
emb|CBI30310.3| unnamed protein product [Vitis vinifera]              170   1e-40
ref|XP_002309422.1| predicted protein [Populus trichocarpa] gi|2...   169   2e-40
ref|XP_004156253.1| PREDICTED: putative pentatricopeptide repeat...   144   6e-33
ref|XP_004143385.1| PREDICTED: putative pentatricopeptide repeat...   143   2e-32

>ref|XP_002276416.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g11460-like [Vitis vinifera]
          Length = 629

 Score =  170 bits (431), Expect = 1e-40
 Identities = 81/147 (55%), Positives = 108/147 (73%)
 Frame = +2

Query: 2   VIRTGCQRDPYVHSSLISMYSKCNLVEKARQVFDESPEWKRPIVCYNALLSGYVLNSQFF 181
           VI+TGC+ +P+V +SLISMY KC+ +  AR+VFDE+   +   VCYNAL++GY LNS+F 
Sbjct: 82  VIKTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLNSRFS 141

Query: 182 DALLLFKEMCCDGVCFSDVTMVGVIPACVFPDYVKFGLCLHGLSVKCGFDMDSSVGNCLL 361
           DA+LLF++M  +GV  + VTM+G+IP C  P ++ FG  LH  SV+ G D D SVGNCLL
Sbjct: 142 DAVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLSVGNCLL 201

Query: 362 TMYVRYGMLDLARRLFDAMHRKDLVSW 442
           TMYVR G +D AR+LFD M  K L++W
Sbjct: 202 TMYVRCGSVDFARKLFDGMPEKGLITW 228



 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 49/146 (33%), Positives = 78/146 (53%)
 Frame = +2

Query: 5   IRTGCQRDPYVHSSLISMYSKCNLVEKARQVFDESPEWKRPIVCYNALLSGYVLNSQFFD 184
           +R G   D  V + L++MY +C  V+ AR++FD  PE  + ++ +NA++SGY  N     
Sbjct: 186 VRFGLDGDLSVGNCLLTMYVRCGSVDFARKLFDGMPE--KGLITWNAMISGYAQNGLAGH 243

Query: 185 ALLLFKEMCCDGVCFSDVTMVGVIPACVFPDYVKFGLCLHGLSVKCGFDMDSSVGNCLLT 364
            L L+++M   G+    VT+VGV+ +C        G  +       GF  +  + N L+ 
Sbjct: 244 VLDLYRKMEFTGIVPDPVTLVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKNALIN 303

Query: 365 MYVRYGMLDLARRLFDAMHRKDLVSW 442
           MY R G L  AR +FD M  K+++SW
Sbjct: 304 MYARCGNLVKARAIFDGMTEKNVISW 329



 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 36/132 (27%), Positives = 66/132 (50%), Gaps = 1/132 (0%)
 Frame = +2

Query: 26  DPYVHSSLISMYSKCNLVEKARQVFDESPEWKRPIVCYNALLSGYVLNSQFFDALLLFKE 205
           +P++ ++LI+MY++C  + KAR +FD   E  + ++ + A+++GY ++ Q   A+ LF E
Sbjct: 294 NPFLKNALINMYARCGNLVKARAIFDGMTE--KNVISWTAIIAGYGMHGQGELAVQLFDE 351

Query: 206 MCCDGVCFSDVTMVGVIPACVFPDYVKFGL-CLHGLSVKCGFDMDSSVGNCLLTMYVRYG 382
           M            V V+ AC      + GL     +    G        +C++ +  R G
Sbjct: 352 MISSDELPDGAAFVSVLSACSHAGLTEKGLYYFTAMERDYGLQPGPEHYSCVVDLLGRAG 411

Query: 383 MLDLARRLFDAM 418
            L+ AR+L  +M
Sbjct: 412 RLEEARKLIGSM 423


>emb|CBI30310.3| unnamed protein product [Vitis vinifera]
          Length = 543

 Score =  170 bits (431), Expect = 1e-40
 Identities = 81/147 (55%), Positives = 108/147 (73%)
 Frame = +2

Query: 2   VIRTGCQRDPYVHSSLISMYSKCNLVEKARQVFDESPEWKRPIVCYNALLSGYVLNSQFF 181
           VI+TGC+ +P+V +SLISMY KC+ +  AR+VFDE+   +   VCYNAL++GY LNS+F 
Sbjct: 82  VIKTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLNSRFS 141

Query: 182 DALLLFKEMCCDGVCFSDVTMVGVIPACVFPDYVKFGLCLHGLSVKCGFDMDSSVGNCLL 361
           DA+LLF++M  +GV  + VTM+G+IP C  P ++ FG  LH  SV+ G D D SVGNCLL
Sbjct: 142 DAVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLSVGNCLL 201

Query: 362 TMYVRYGMLDLARRLFDAMHRKDLVSW 442
           TMYVR G +D AR+LFD M  K L++W
Sbjct: 202 TMYVRCGSVDFARKLFDGMPEKGLITW 228



 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 49/146 (33%), Positives = 78/146 (53%)
 Frame = +2

Query: 5   IRTGCQRDPYVHSSLISMYSKCNLVEKARQVFDESPEWKRPIVCYNALLSGYVLNSQFFD 184
           +R G   D  V + L++MY +C  V+ AR++FD  PE  + ++ +NA++SGY  N     
Sbjct: 186 VRFGLDGDLSVGNCLLTMYVRCGSVDFARKLFDGMPE--KGLITWNAMISGYAQNGLAGH 243

Query: 185 ALLLFKEMCCDGVCFSDVTMVGVIPACVFPDYVKFGLCLHGLSVKCGFDMDSSVGNCLLT 364
            L L+++M   G+    VT+VGV+ +C        G  +       GF  +  + N L+ 
Sbjct: 244 VLDLYRKMEFTGIVPDPVTLVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKNALIN 303

Query: 365 MYVRYGMLDLARRLFDAMHRKDLVSW 442
           MY R G L  AR +FD M  K+++SW
Sbjct: 304 MYARCGNLVKARAIFDGMTEKNVISW 329



 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 36/132 (27%), Positives = 66/132 (50%), Gaps = 1/132 (0%)
 Frame = +2

Query: 26  DPYVHSSLISMYSKCNLVEKARQVFDESPEWKRPIVCYNALLSGYVLNSQFFDALLLFKE 205
           +P++ ++LI+MY++C  + KAR +FD   E  + ++ + A+++GY ++ Q   A+ LF E
Sbjct: 294 NPFLKNALINMYARCGNLVKARAIFDGMTE--KNVISWTAIIAGYGMHGQGELAVQLFDE 351

Query: 206 MCCDGVCFSDVTMVGVIPACVFPDYVKFGL-CLHGLSVKCGFDMDSSVGNCLLTMYVRYG 382
           M            V V+ AC      + GL     +    G        +C++ +  R G
Sbjct: 352 MISSDELPDGAAFVSVLSACSHAGLTEKGLYYFTAMERDYGLQPGPEHYSCVVDLLGRAG 411

Query: 383 MLDLARRLFDAM 418
            L+ AR+L  +M
Sbjct: 412 RLEEARKLIGSM 423


>ref|XP_002309422.1| predicted protein [Populus trichocarpa] gi|222855398|gb|EEE92945.1|
           predicted protein [Populus trichocarpa]
          Length = 582

 Score =  169 bits (428), Expect = 2e-40
 Identities = 79/147 (53%), Positives = 108/147 (73%)
 Frame = +2

Query: 2   VIRTGCQRDPYVHSSLISMYSKCNLVEKARQVFDESPEWKRPIVCYNALLSGYVLNSQFF 181
           V +TGC  +P+V +SLISMY KC+L++ AR++FDE+P+ ++  VCYN+LLSGY LNS+  
Sbjct: 36  VFKTGCLLEPFVQTSLISMYGKCSLIDNARKLFDENPQSRKLTVCYNSLLSGYALNSRVK 95

Query: 182 DALLLFKEMCCDGVCFSDVTMVGVIPACVFPDYVKFGLCLHGLSVKCGFDMDSSVGNCLL 361
           D ++LF EM   GV  + VTM+G++  C  P  +  G+C+HG  VK G DMDSSVGNCLL
Sbjct: 96  DVVVLFCEMRELGVEINGVTMLGLVQPCGIPGNLGLGMCVHGFCVKFGLDMDSSVGNCLL 155

Query: 362 TMYVRYGMLDLARRLFDAMHRKDLVSW 442
           TMYV+ G +D  R+LFD M RK L++W
Sbjct: 156 TMYVKSGEIDCGRKLFDEMPRKGLITW 182



 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 48/146 (32%), Positives = 78/146 (53%)
 Frame = +2

Query: 5   IRTGCQRDPYVHSSLISMYSKCNLVEKARQVFDESPEWKRPIVCYNALLSGYVLNSQFFD 184
           ++ G   D  V + L++MY K   ++  R++FDE P  ++ ++ +NA+++GY  N    +
Sbjct: 140 VKFGLDMDSSVGNCLLTMYVKSGEIDCGRKLFDEMP--RKGLITWNAMINGYAQNGLANN 197

Query: 185 ALLLFKEMCCDGVCFSDVTMVGVIPACVFPDYVKFGLCLHGLSVKCGFDMDSSVGNCLLT 364
            L L+KEM   G C   +T+VGV+ +C     +  G  +       GF  +  + N L+ 
Sbjct: 198 VLELYKEMESKGFCPDPLTLVGVLSSCAHLGALSVGKEVERKMEGFGFSSNPFLNNALVN 257

Query: 365 MYVRYGMLDLARRLFDAMHRKDLVSW 442
           MY R G L  AR +FD M  K +VSW
Sbjct: 258 MYARCGNLKKARDIFDGMPVKSVVSW 283



 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 43/145 (29%), Positives = 75/145 (51%), Gaps = 2/145 (1%)
 Frame = +2

Query: 14  GCQRDPYVHSSLISMYSKCNLVEKARQVFDESPEWKRPIVCYNALLSGYVLNSQFFDALL 193
           G   +P+++++L++MY++C  ++KAR +FD  P   + +V + A++ GY ++ Q   A+ 
Sbjct: 244 GFSSNPFLNNALVNMYARCGNLKKARDIFDGMPV--KSVVSWTAIIGGYGMHGQGEVAVG 301

Query: 194 LFKEMCCDGVCFSDVTMVGVIPACVFPDYVKFGLCLHG-LSVKCGFDMDSSVGNCLLTMY 370
           LF EM   G+       V V+ AC        GL   G +  K G    +   +C++ + 
Sbjct: 302 LFDEMIRGGIKPDGTAFVSVLSACSHAGLTNKGLDYFGVMERKYGLRPGAEHYSCMVDLL 361

Query: 371 VRYGMLDLARRLFDAMH-RKDLVSW 442
            R G L+ AR L ++M  R D   W
Sbjct: 362 GRAGRLNEARELIESMQVRADGALW 386


>ref|XP_004156253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g11460-like [Cucumis sativus]
          Length = 614

 Score =  144 bits (364), Expect = 6e-33
 Identities = 71/147 (48%), Positives = 105/147 (71%)
 Frame = +2

Query: 2   VIRTGCQRDPYVHSSLISMYSKCNLVEKARQVFDESPEWKRPIVCYNALLSGYVLNSQFF 181
           + + GC  +P+V + LISMY K +LV+ AR+VF+E+   ++  VCYNAL+SGYV NS+  
Sbjct: 66  ITKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCS 125

Query: 182 DALLLFKEMCCDGVCFSDVTMVGVIPACVFPDYVKFGLCLHGLSVKCGFDMDSSVGNCLL 361
           DA+LLF++M  +GV  + VT++G+IPACV P  ++ G  LH  ++K GFD D SV NC +
Sbjct: 126 DAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFI 185

Query: 362 TMYVRYGMLDLARRLFDAMHRKDLVSW 442
           TMY++ G ++ A++LFD M  K L+SW
Sbjct: 186 TMYMKCGSVNYAQKLFDEMPVKGLISW 212



 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 49/146 (33%), Positives = 76/146 (52%)
 Frame = +2

Query: 5   IRTGCQRDPYVHSSLISMYSKCNLVEKARQVFDESPEWKRPIVCYNALLSGYVLNSQFFD 184
           ++ G   D  V +  I+MY KC  V  A+++FDE P   + ++ +NA++SGY  N    +
Sbjct: 170 LKYGFDSDVSVVNCFITMYMKCGSVNYAQKLFDEMPV--KGLISWNAMVSGYAQNGLATN 227

Query: 185 ALLLFKEMCCDGVCFSDVTMVGVIPACVFPDYVKFGLCLHGLSVKCGFDMDSSVGNCLLT 364
            L L++ M  +GV    VT+VGV+ +C        G  +       GF  +  + N L+ 
Sbjct: 228 VLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNNALIN 287

Query: 365 MYVRYGMLDLARRLFDAMHRKDLVSW 442
           MY R G L  A+ +FD M  + LVSW
Sbjct: 288 MYARCGNLTKAQAVFDGMPERTLVSW 313



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 40/138 (28%), Positives = 73/138 (52%), Gaps = 2/138 (1%)
 Frame = +2

Query: 11  TGCQRDPYVHSSLISMYSKCNLVEKARQVFDESPEWKRPIVCYNALLSGYVLNSQFFDAL 190
           +G   +P+++++LI+MY++C  + KA+ VFD  PE  R +V + A++ GY ++     A+
Sbjct: 273 SGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPE--RTLVSWTAIIGGYGMHGHGEIAV 330

Query: 191 LLFKEMCCDGVCFSDVTMVGVIPACVFPDYVKFGLCLHGLSVKCGFDMDSSVG--NCLLT 364
            LFKEM   G+       V V+ AC        GL    + +K  + ++      +C++ 
Sbjct: 331 QLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKM-MKRNYQLEPGPEHYSCMVD 389

Query: 365 MYVRYGMLDLARRLFDAM 418
           +  R G L  A+ L ++M
Sbjct: 390 LLGRAGRLKEAQTLIESM 407


>ref|XP_004143385.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g11460-like [Cucumis sativus]
          Length = 623

 Score =  143 bits (360), Expect = 2e-32
 Identities = 70/147 (47%), Positives = 105/147 (71%)
 Frame = +2

Query: 2   VIRTGCQRDPYVHSSLISMYSKCNLVEKARQVFDESPEWKRPIVCYNALLSGYVLNSQFF 181
           + + GC  +P+V + LISMY K +LV+ AR+VF+E+   ++  VCYNAL+SGYV NS+  
Sbjct: 75  ITKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCS 134

Query: 182 DALLLFKEMCCDGVCFSDVTMVGVIPACVFPDYVKFGLCLHGLSVKCGFDMDSSVGNCLL 361
           +A+LLF++M  +GV  + VT++G+IPACV P  ++ G  LH  ++K GFD D SV NC +
Sbjct: 135 EAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFI 194

Query: 362 TMYVRYGMLDLARRLFDAMHRKDLVSW 442
           TMY++ G ++ A++LFD M  K L+SW
Sbjct: 195 TMYMKCGSVNYAQKLFDEMPVKGLISW 221



 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 49/146 (33%), Positives = 76/146 (52%)
 Frame = +2

Query: 5   IRTGCQRDPYVHSSLISMYSKCNLVEKARQVFDESPEWKRPIVCYNALLSGYVLNSQFFD 184
           ++ G   D  V +  I+MY KC  V  A+++FDE P   + ++ +NA++SGY  N    +
Sbjct: 179 LKYGFDSDVSVVNCFITMYMKCGSVNYAQKLFDEMPV--KGLISWNAMVSGYAQNGLATN 236

Query: 185 ALLLFKEMCCDGVCFSDVTMVGVIPACVFPDYVKFGLCLHGLSVKCGFDMDSSVGNCLLT 364
            L L++ M  +GV    VT+VGV+ +C        G  +       GF  +  + N L+ 
Sbjct: 237 VLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNNALIN 296

Query: 365 MYVRYGMLDLARRLFDAMHRKDLVSW 442
           MY R G L  A+ +FD M  + LVSW
Sbjct: 297 MYARCGNLTKAQAVFDGMPERTLVSW 322



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 40/138 (28%), Positives = 73/138 (52%), Gaps = 2/138 (1%)
 Frame = +2

Query: 11  TGCQRDPYVHSSLISMYSKCNLVEKARQVFDESPEWKRPIVCYNALLSGYVLNSQFFDAL 190
           +G   +P+++++LI+MY++C  + KA+ VFD  PE  R +V + A++ GY ++     A+
Sbjct: 282 SGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPE--RTLVSWTAIIGGYGMHGHGEIAV 339

Query: 191 LLFKEMCCDGVCFSDVTMVGVIPACVFPDYVKFGLCLHGLSVKCGFDMDSSVG--NCLLT 364
            LFKEM   G+       V V+ AC        GL    + +K  + ++      +C++ 
Sbjct: 340 QLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKM-MKRNYQLEPGPEHYSCMVD 398

Query: 365 MYVRYGMLDLARRLFDAM 418
           +  R G L  A+ L ++M
Sbjct: 399 LLGRAGRLKEAQTLIESM 416