BLASTX nr result

ID: Coptis24_contig00032151 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032151
         (545 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313260.1| white-brown-complex ABC transporter family [...   277   9e-73
ref|XP_002530909.1| ATP-binding cassette transporter, putative [...   269   2e-70
ref|XP_003609516.1| ABC transporter G family member [Medicago tr...   268   3e-70
ref|XP_002276041.1| PREDICTED: ABC transporter G family member 2...   268   4e-70
emb|CAN68542.1| hypothetical protein VITISV_020445 [Vitis vinifera]   268   4e-70

>ref|XP_002313260.1| white-brown-complex ABC transporter family [Populus trichocarpa]
           gi|222849668|gb|EEE87215.1| white-brown-complex ABC
           transporter family [Populus trichocarpa]
          Length = 566

 Score =  277 bits (708), Expect = 9e-73
 Identities = 130/183 (71%), Positives = 151/183 (82%), Gaps = 2/183 (1%)
 Frame = -3

Query: 543 KEASRGAYKISSYMAANTIIFVPFLFAVALTFSIPVYWLVGLNPSFTAFAFFVFIVWMIX 364
           KE+SRGAY ISSYM ANTI+F+PFLFAVA+ FSIPVYW+VGLNPS  AFAFFVF+VW+I 
Sbjct: 374 KESSRGAYNISSYMIANTIVFLPFLFAVAMLFSIPVYWIVGLNPSIAAFAFFVFVVWLIV 433

Query: 363 XXXXXXXXXXXXXSPDFISGNSLICTVLGAFFLFSGYFIPRDNIPKYWLFMYYISLYKYP 184
                        SPDFISGNSLICTVLGAFFLFSGYFIP++NIPKYWLFMYY+SLY+YP
Sbjct: 434 LMASSLVLFLSAVSPDFISGNSLICTVLGAFFLFSGYFIPKENIPKYWLFMYYVSLYRYP 493

Query: 183 LDALLVNEYWSMRERCFS--ALNSTSCSLTGGDILRMRGLEKDTRLMNVGIMFGFFLLYR 10
           LD+LL NEYWS+R  CFS    + ++C LTG D+L+ RGL+KDTR +NVGIMFGFF+ YR
Sbjct: 494 LDSLLTNEYWSVRNECFSWQGQDHSTCVLTGNDVLKSRGLDKDTRWINVGIMFGFFVFYR 553

Query: 9   VLC 1
           VLC
Sbjct: 554 VLC 556


>ref|XP_002530909.1| ATP-binding cassette transporter, putative [Ricinus communis]
            gi|223529531|gb|EEF31485.1| ATP-binding cassette
            transporter, putative [Ricinus communis]
          Length = 659

 Score =  269 bits (688), Expect = 2e-70
 Identities = 126/182 (69%), Positives = 146/182 (80%), Gaps = 1/182 (0%)
 Frame = -3

Query: 543  KEASRGAYKISSYMAANTIIFVPFLFAVALTFSIPVYWLVGLNPSFTAFAFFVFIVWMIX 364
            KEASRGAYKISSYM ANTI+F+PFLFAVA+ FS+PVYWLVGLNPS +AF FF F+VW+I 
Sbjct: 465  KEASRGAYKISSYMIANTIVFLPFLFAVAILFSVPVYWLVGLNPSASAFIFFTFVVWLIV 524

Query: 363  XXXXXXXXXXXXXSPDFISGNSLICTVLGAFFLFSGYFIPRDNIPKYWLFMYYISLYKYP 184
                         SPDFISGNSLICTVLGAFFLFSGYFIP++NIPKYW+FMYY+SLY+YP
Sbjct: 525  LMASSLVLFLSAASPDFISGNSLICTVLGAFFLFSGYFIPKENIPKYWIFMYYVSLYRYP 584

Query: 183  LDALLVNEYWSMRERCFSALN-STSCSLTGGDILRMRGLEKDTRLMNVGIMFGFFLLYRV 7
            LD L+ NEYWSMR  CFS  N    C +TG D+L+ RGL+KD+R  NVGIM GFF+ YR+
Sbjct: 585  LDCLVTNEYWSMRSECFSWQNGDDQCLVTGNDVLKSRGLDKDSRWSNVGIMLGFFVFYRL 644

Query: 6    LC 1
            LC
Sbjct: 645  LC 646


>ref|XP_003609516.1| ABC transporter G family member [Medicago truncatula]
           gi|355510571|gb|AES91713.1| ABC transporter G family
           member [Medicago truncatula]
          Length = 643

 Score =  268 bits (686), Expect = 3e-70
 Identities = 122/181 (67%), Positives = 147/181 (81%)
 Frame = -3

Query: 543 KEASRGAYKISSYMAANTIIFVPFLFAVALTFSIPVYWLVGLNPSFTAFAFFVFIVWMIX 364
           KEASRGAY+ISSY+ ANT +F+PFLF V+L F++PVYW+VGLNPS TAF FF F+VW+I 
Sbjct: 450 KEASRGAYRISSYLIANTFVFLPFLFVVSLLFAVPVYWIVGLNPSLTAFTFFTFVVWLIV 509

Query: 363 XXXXXXXXXXXXXSPDFISGNSLICTVLGAFFLFSGYFIPRDNIPKYWLFMYYISLYKYP 184
                        SPDFISGNSLICTVLGAFFLFSGYFIP+++IPKYWLFMYY+SLY+YP
Sbjct: 510 LMASSLVLFLSSVSPDFISGNSLICTVLGAFFLFSGYFIPKESIPKYWLFMYYVSLYRYP 569

Query: 183 LDALLVNEYWSMRERCFSALNSTSCSLTGGDILRMRGLEKDTRLMNVGIMFGFFLLYRVL 4
           LDALL NEYW++   CFS  +S+ C +TG D+L+ RG+EKD R MNVGIMFGFF+ YR+L
Sbjct: 570 LDALLTNEYWNVGNECFSQGSSSMCLVTGFDVLKSRGIEKDNRWMNVGIMFGFFVFYRLL 629

Query: 3   C 1
           C
Sbjct: 630 C 630


>ref|XP_002276041.1| PREDICTED: ABC transporter G family member 23 [Vitis vinifera]
          Length = 650

 Score =  268 bits (685), Expect = 4e-70
 Identities = 123/183 (67%), Positives = 149/183 (81%), Gaps = 2/183 (1%)
 Frame = -3

Query: 543  KEASRGAYKISSYMAANTIIFVPFLFAVALTFSIPVYWLVGLNPSFTAFAFFVFIVWMIX 364
            +E+SRGAY+ISSYM ANTIIF+PFLF VA+ F++PVYWLVGLNPS  AF FF F+VW+I 
Sbjct: 455  RESSRGAYRISSYMIANTIIFLPFLFTVAILFAVPVYWLVGLNPSIAAFTFFTFVVWLIV 514

Query: 363  XXXXXXXXXXXXXSPDFISGNSLICTVLGAFFLFSGYFIPRDNIPKYWLFMYYISLYKYP 184
                         SPDFISGNSLICTVLGAFFLFSGYFIP+++IP+YWLFMYY+SLY+YP
Sbjct: 515  MMASSLVLFLSAVSPDFISGNSLICTVLGAFFLFSGYFIPKESIPRYWLFMYYVSLYRYP 574

Query: 183  LDALLVNEYWSMRERCFS--ALNSTSCSLTGGDILRMRGLEKDTRLMNVGIMFGFFLLYR 10
            LD+LL+NEYWSM+  CFS    + + C +TG D+L+ RGL+KDTR MNVGIMFGFF+ YR
Sbjct: 575  LDSLLINEYWSMKGECFSWQVQDHSKCLITGNDVLKGRGLDKDTRWMNVGIMFGFFIFYR 634

Query: 9    VLC 1
            +LC
Sbjct: 635  LLC 637


>emb|CAN68542.1| hypothetical protein VITISV_020445 [Vitis vinifera]
          Length = 650

 Score =  268 bits (685), Expect = 4e-70
 Identities = 123/183 (67%), Positives = 149/183 (81%), Gaps = 2/183 (1%)
 Frame = -3

Query: 543  KEASRGAYKISSYMAANTIIFVPFLFAVALTFSIPVYWLVGLNPSFTAFAFFVFIVWMIX 364
            +E+SRGAY+ISSYM ANTIIF+PFLF VA+ F++PVYWLVGLNPS  AF FF F+VW+I 
Sbjct: 455  RESSRGAYRISSYMIANTIIFLPFLFTVAILFAVPVYWLVGLNPSIAAFTFFTFVVWLIV 514

Query: 363  XXXXXXXXXXXXXSPDFISGNSLICTVLGAFFLFSGYFIPRDNIPKYWLFMYYISLYKYP 184
                         SPDFISGNSLICTVLGAFFLFSGYFIP+++IP+YWLFMYY+SLY+YP
Sbjct: 515  MMASSLVLFLSAVSPDFISGNSLICTVLGAFFLFSGYFIPKESIPRYWLFMYYVSLYRYP 574

Query: 183  LDALLVNEYWSMRERCFS--ALNSTSCSLTGGDILRMRGLEKDTRLMNVGIMFGFFLLYR 10
            LD+LL+NEYWSM+  CFS    + + C +TG D+L+ RGL+KDTR MNVGIMFGFF+ YR
Sbjct: 575  LDSLLINEYWSMKGECFSWQVQDHSKCLITGNDVLKGRGLDKDTRWMNVGIMFGFFIFYR 634

Query: 9    VLC 1
            +LC
Sbjct: 635  LLC 637


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